Mya arenaria (softshell): 128217342
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Entry
128217342 CDS
T09995
Name
(RefSeq) LOW QUALITY PROTEIN: putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128217342
03041 Spliceosome [BR:
maea03041
]
128217342
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
128217342
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128217342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128217342
NCBI-ProteinID:
XP_052780402
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All DBs
Position
14:complement(23287433..23294067)
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AA seq
715 aa
AA seq
DB search
MKRSQDRDVSPRIKRSRSEYLGPEHDFIRDRYSSERERSRTRMKDTFFEDEMDRQRAKYK
DDRYDDYPPAMPRTETRNPEYRSLCVSGVSSKVPDRILKDQMYREFEKYGEMNVNITFSG
DQRVVYINFKYPEDARAAKHDKYNKLIVFDRPVRIESVYNKIRSSSPPPYREQFSSGRGD
YPTPGPPMGRGYPGPPGPPLPGPGRDFHGPPPPFRGDFHGGPPLHHDDHAFPPHNQEGGF
VPKRAPGSEKFPYHLDHKPPEEDANATRTLFIGNLDYNISEQEIRSIFEAFGPIDEIDIK
RPQRGQGNAYAFMKYYNLDMAHRAKVEMSGKYIGRFQCKIGYGKIIPSSCIWVGGLGPWV
TPQALEAEFDRFGVILKIDWPHGKNYAYVVYENGDAAQAALNEMRGFPLGGKDKRIRVDF
ADPTHIGQQINDAPPPKRNYGQPMDGARYSDGPPRDGYSGPPREPFPGGDRDEWAREGNG
YRPGDRPRPGYEDFRPSPGDKRMSRSPGRDYYDRRRDDYSPQRRRSRSPEDMSPLENIHS
LSDLSKRLPVAWNGALVLKSSAFPARMHVVSGNVQIVDRLMRDPTTTETPALTIKQRLRL
DPSKTDDVAKRVLQAGPRNHCVLIAFPSSLENYDDPARNIQQRPLKNLVSYLKQKEAAGV
ISLPPYPTKDKDNVGLLHAFPPCQFGYEYLLRRAPSCQQIACDDYIVVVVVRGAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatcacaagacagggatgtttcgcctagaatcaaaagatcccgttcagaatat
ctaggacctgagcatgacttcatcagagatagatattcatcagaaagggaacgttcccgt
actcgcatgaaagacacctttttcgaggacgaaatggatcgccaacgtgcaaaatataag
gacgatagatatgatgactatccacccgcaatgccaagaactgaaacaagaaaccctgag
tataggtcattgtgtgtaagtggtgttagtagcaaagtgccagacagaattttgaaagat
caaatgtacagagagtttgaaaagtatggtgaaatgaacgtgaatatcacattcagtggt
gatcaacgggtggtttacattaacttcaagtatcccgaagatgctcgtgcagcaaaacat
gacaagtataataagctaattgtattcgacaggcccgtcagaatcgagtctgtgtataat
aagatacgcagttccagtccacctccttatcgtgaacaatttagcagtggacgtggtgat
tatccaacgcctgggcctccaatggggcgtggctatcctggacccccaggcccaccacta
ccaggacctggtagggactttcacggaccacctcctccattccgcggagattttcatggt
ggacctccactccatcacgatgatcatgcttttcctccacataaccaagaaggaggcttt
gttccaaaaagagctccaggaagtgaaaagttcccgtatcatttagatcataaaccacct
gaggaagatgctaatgcaactagaacattgtttattggcaacttagattataatatttca
gaacaagaaataagaagtatttttgaggcatttgggccgatagatgaaattgatatcaaa
agaccacagagaggccaaggaaatgcatatgcatttatgaagtactataatttagacatg
gcccatcgagctaaagttgaaatgtctggcaaatacattggaagatttcagtgcaaaatt
ggctacggaaaaattataccttcaagttgtatttgggtaggtggtttagggccatgggta
acacctcaagctcttgaagcagagtttgacagatttggtgtcattttaaaaattgattgg
ccacatggcaaaaactatgcttacgttgtgtatgaaaatggtgatgcagcacaggcagct
ttgaacgagatgcgtggcttccctttgggtggaaaagacaaacgcataagagtagacttt
gcagatccaactcatattggtcaacaaattaatgatgcaccacctccaaagagaaactac
ggtcaaccaatggatggtgcaagatacagtgatggacctccaagagatggctattctggt
ccaccaagagagcctttcccaggaggtgatagggacgaatgggcaagagaaggcaatgga
tacaggccaggtgacaggccaaggccaggttatgaagatttcaggccttcgccaggtgac
aaaagaatgtctaggtctcctggtagagattattatgatcgcaggagagacgattattca
cctcaaagaagacgctctagatccccagaagatatgtcaccattagaaaatattcactca
ttgtctgacctttctaagaggttacctgtggcatggaatggtgctttggtactaaagtcc
agtgcgtttccagcgagaatgcatgtggtcagtggaaatgtgcaaatcgttgacagatta
atgcgtgatcctacaactactgagactccagctttgactatcaaacagagactgcgtctt
gatcccagcaaaactgacgatgttgcaaagcgtgttctgcaagctggtccaagaaaccat
tgcgtgttgatagcgttcccaagctcgttggagaactatgatgatcctgcacgaaatatt
caacagcgaccgctgaagaatctggtttcataccttaagcaaaaagaggctgcgggggtt
atcagtcttccgccctatccaaccaaggacaaagacaatgttgggcttcttcatgctttc
ccgccctgtcagtttggttacgaatatctacttcgccgggccccaagctgccagcagatt
gcatgcgatgattacattgttgtcgttgttgttcgcggggctgcttaa
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