Mya arenaria (softshell): 128217544
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Entry
128217544 CDS
T09995
Name
(RefSeq) LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maea03016
]
128217544
Enzymes [BR:
maea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
128217544
Transfer RNA biogenesis [BR:
maea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128217544
Prokaryotic type
128217544
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Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
DUF2298
Motif
Other DBs
NCBI-GeneID:
128217544
NCBI-ProteinID:
XP_052780706
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Position
14:10570353..10581324
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AA seq
559 aa
AA seq
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MVKIRRLMYLCRYSDFLVNEISLDGEVVRLTNTDLPCPLPQATPQVETGSLVLVSREDAD
KLTELLQSKDTSRCVTIQASTDKGERTRMHAEISRCFPGLETDTVVDGDNRLIQARITTN
KGNARHNWPKGRGDYCRFVLYKENKDTMDAVGLIAKMISLKSSLFQYCGTKDRRGKTSQH
ISVYKVAPEKLRGLNKKLRNIVLGNFSYVEKPLQLSGAQGSKFTVVLRSVTGSQDQIDAG
MTSLRETGFINYFGMQRFGTSAIPSHHIGRYGLVVGRLQTAVELILKPRPGDTQDEQLTA
ARQFWWEKRDSKAAINKFPKFSYIERNILSGLVGNENNFLGAFQKLSRNNRLMYVHAYQS
YIWNVSTSHRVKKYGLKPMVGDLVIPGVGDYGQEEDTDEQASEDSDSKPKPVIVTAENIA
EYSIYDVVLPTPGHFSVYPDNDIKSLYKELMEKDGLDYTDMKRKQKDFSLPGTYRHIIVK
PKDVSWQLHHYDDPNIPXVLSDWDIIKEEKLPENTNEGSKLALEVTFSLPPSCYATMALR
DLLKIDTSAGYHTSLTNAT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagataaggagattgatgtatttgtgcaggtactctgacttcctggtgaatgag
atcagcctagatggtgaggttgtgagactaactaacactgacctgccctgtccactaccc
caagcaacaccacaggtagagacgggatccctggtactggtctcaagagaggatgctgac
aagctcactgagctcctacagtctaaagacacgtccaggtgtgtcaccatacaggcatca
acagacaagggtgagaggacaagaatgcatgccgagatatcacgatgtttcccagggcta
gagacggatacggtggtggacggggacaataggctgatacaggcccgaatcactacaaac
aagggcaatgcgcgtcacaactggccaaaggggcgtggagattactgccggtttgttctc
tacaaggaaaacaaggataccatggatgctgtgggcctcatagccaagatgatcagtctg
aagagcagcctgttccagtactgtggaaccaaggacagacgagggaaaaccagccagcac
atctcggtctacaaggttgccccagaaaaactacgaggtctcaataagaaactaagaaat
atagtccttggaaatttcagctatgtggagaagcccctacagttgagtggtgctcagggt
agcaagttcacagtggttctacggtctgtgactggttctcaggatcaaattgatgctggg
atgacctcgctgcgggagaccggcttcatcaactactttggcatgcaacgtttcggcacc
tcggctataccatctcatcatatcggcaggtatggccttgttgttgggagacttcaaaca
gctgtagaactgattctgaaaccaagacccggagacacacaagatgaacagttgactgct
gcacgccagttttggtgggagaaacgagacagcaaggcggctatcaacaagtttcccaag
ttttcttacattgagaggaacattctgtctggacttgtaggcaatgagaacaacttcctt
ggggctttccaaaagttatcacgcaacaaccgactgatgtacgtacatgcctaccagagt
tacatatggaacgtgtccacatcccatcgagtcaagaaatacgggcttaaacccatggtt
ggggaccttgtcataccaggggtgggggactacggacaggaagaggacacagatgagcaa
gcaagtgaagattctgacagcaagccaaagcctgtgattgttactgcagaaaatattgct
gagtacagtatctatgatgtggtgttgcccacgcctggacacttctccgtgtacccagat
aatgacatcaagtcactgtataaggaactcatggagaaagatggtcttgattacacagac
atgaagcggaaacaaaaggacttttccctaccagggacttatagacacattattgtgaaa
ccaaaggacgtatcctggcaactccatcactatgatgacccaaacattcccnttgtgctc
agtgactgggacatcatcaaggaagaaaaactgccagaaaacacaaatgaaggcagtaaa
cttgcactggaggttacattttccctccctccgtcctgctatgctaccatggctttacga
gacctgctcaaaatcgacacgtcagcagggtatcacacttcattgactaacgcaacttga
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