Mya arenaria (softshell): 128217693
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Entry
128217693 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128217693
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128217693
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
128217693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
128217693
NCBI-ProteinID:
XP_052780971
LinkDB
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Position
14:complement(17639562..17787544)
Genome browser
AA seq
1118 aa
AA seq
DB search
MGFDTEKFVCYVSEDRKCSLCNLVLDNPVQGPCKHVFCSGCILPWVVEHGCCPFRCQALN
TGNLTNVLALRDLVLNMKVVCEFRLNGCTEQPKLREFIPHIKECAYRKVRCGNEGCDRLV
CAKDLEAHEIQDCGFRPVGVCESGCGAVLKKNDCEHDCIQYLKSEVLNQQTRVQNIEKEL
KLLNDQLKTREKELLLRIKGMKKRLQFQGIKLVNQEKNPETMPVDNSMECTTKCGTEKRM
TLVLERAASSLGFNIMGGLTPEPNNNGNVIISPNNSNNNNQHVGMATEGIIVSKVLAGGP
AQKKGLQTHDQIVKVNGRDLSQASHEEAVEAFRTAEEPIVVEVLRRVNKNKMKTRSTPTM
VSIGTQTEEDIYGYNRPPTPPPSFYPFPYSGLMEPSSRRPLMFSQSTDNMGLTDIEMAQV
DYDDPYYDERQYEVEYEEVVLQRMSEADKLGLTLCYGPTEDGITDIFIGEVDPYSVAAKD
GRIREGDQIVQINGVDVHSRDQAIKLFSDRGSDITLLLARPQMQFDDGFMEEHNVVLDGL
QMDILEKHHHDNMQIMASMLSRGHHFDEEGATTDTGTTENSSNKHEKDSGVGRTDESTKN
DESSEQDVFDNESMMGTRKSGSSKGSHSYNGDVCEQNYSNDSFVSNGDVSYEIPDNDVNN
KFREVLEKRCDTNNLNRVNSPRKDRKSSESTESSIDKELAQLNREMEGIQIECQEMVNNH
AQKGQKDAVKCEREVYKTQRSVPRMGTRIDKAKAGMSPGPDSSDSLGRRDTPPTPKMGPS
RFGGKVADRDGSVSTSAYNTGESCRSTPLTLELNPTSDEGDRGFKNSMLCLATTGTSTTS
PLPSHSDTEKQTQTPARSQDCSSDENYMTIAEVVEINKKNDSVKPQMNSGESLQDLYMQY
ADVMYTNRANLEHTIQIQQKLFQQQLDQKTPHRRRQSSSPGAKNGSSVSGYQSPNISQQT
QKGNEQTPPDSGQSQMEWVVKRRPDGTRYITRRQVKSKMLKERAKKISEERCGMTTDDDA
MSELKTGRYWTKEERKRHLEKARDYKRRREMMARAKMETVKEADEKKDIVELSHRKMNKH
KGKKVLDDFTTVQEMMAHGNKGSDSSKNYKPLLSVTTV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgatactgagaagtttgtgtgctacgtttctgaggacaggaaatgctcgttg
tgcaatcttgttctggacaatccagtccagggaccgtgtaagcatgtgttttgttccggc
tgtatacttccttgggtggtggaacatggctgttgtcctttcagatgccaagcattgaac
actggaaacctgaccaatgttttggcgctcagggatctcgtgcttaacatgaaagttgtc
tgtgaatttagattaaatggctgtacggagcagccaaagctgagagagtttatcccacat
atcaaggagtgcgcatacagaaaagtaaggtgtgggaatgaggggtgtgataggttggtt
tgtgcgaaggacttagaggcccatgaaattcaagattgtggtttccgtcctgttggtgtc
tgcgaatctggttgtggagctgttttgaagaaaaacgattgtgagcatgattgcattcaa
tacctgaagtctgaggtgctcaaccaacaaacacgtgttcagaatatcgaaaaggagcta
aaactattaaacgaccagcttaagactcgggagaaagaattactgttacgaataaagggt
atgaagaaacgtttacagtttcaaggtatcaaactagtcaatcaagaaaaaaacccggaa
acgatgccagtggacaacagcatggaatgcacgaccaagtgtggcactgagaagaggatg
actttagttcttgagcgagctgctagtagcctcggatttaacatcatgggtggactcaca
cccgagcccaacaacaatggaaacgtcatcatcagcccaaacaacagcaacaacaacaac
cagcatgttggcatggcaacagaggggattatcgtttccaaggtcctggctggtggacca
gcacagaagaagggtctccaaacacatgaccagattgtcaaggtaaatggtcgtgacctg
tcgcaggcgtcacatgaggaggcagtggaggctttccgcactgccgaggagccgatagtt
gtcgaggttcttcgacgtgttaacaagaataagatgaaaacacgctcaacaccaaccatg
gtttctataggaactcaaacggaagaagatatctatggctacaacagacctccaacccct
ccaccctctttctatccatttccatacagcgggttgatggagccctcgtcgcgccgcccg
ctcatgttttcccagagtacggacaacatgggactcactgacatcgagatggcgcaggta
gattatgatgacccgtactatgatgagcgccagtatgaagtggaatatgaggaggtggtt
ttacagaggatgtcagaggcagacaagcttggtttgaccttgtgttacggaccgacagag
gacggcatcacagacatctttataggagaggtggatccatacagtgtggccgcaaaagac
ggccggatccgggagggggatcagattgtccagatcaatggtgttgatgttcacagtcga
gatcaggccatcaagctgttttccgaccgaggttcagacatcacactgctgctggcccgt
ccacagatgcagtttgacgatggatttatggaggagcacaacgttgtgttggatgggcta
caaatggacatcctggagaaacatcaccatgacaacatgcagatcatggcctccatgctc
tccaggggccaccattttgacgaggagggagcgacaacagacacaggtacaactgaaaac
tcatccaacaaacatgagaaagacagcggtgtgggacggacggacgaaagtaccaagaat
gatgagagctcagaacaggatgtgtttgacaatgagagcatgatgggaaccagaaagtct
gggtcgtcaaaaggctcgcatagctacaatggtgatgtttgtgaacagaactacagcaat
gacagttttgtgtctaacggcgacgtgtcttatgaaatccctgataatgacgttaataat
aaattccgagaagttctggaaaagcgctgtgatacaaataacttgaaccgtgtgaattct
cctagaaaagacagaaaaagctctgagagcacagaaagtagtattgacaaggagttagct
cagttgaacagggagatggagggtattcagattgagtgtcaggaaatggtgaataatcac
gcacagaaaggacagaaagatgctgttaagtgtgaaagggaggtgtacaaaacacagcga
agtgtacccagaatgggaactcgcatagacaaagctaaagcgggtatgagtcccggtcca
gactcctcagacagtttaggacgcagagataccccacctactcctaaaatgggtccaagc
cgttttggggggaaagtggcagacagggatggaagtgtttcaacgagtgcctataacacg
ggggagagttgcagaagcactcccctcactcttgaacttaaccccacctctgatgagggg
gatcggggatttaaaaactctatgttgtgcttagcaaccactggtacgagcaccacatcg
cctttgccgtctcatagcgacacagagaagcagacgcagacacctgccaggtcacaggac
tgttctagcgatgaaaattacatgaccatcgctgaggttgtggaaattaataaaaagaat
gatagtgtgaaacctcagatgaactctggtgagtcattacaagacttatacatgcagtat
gcagatgtcatgtacacaaatcgtgccaatttggaacatacaattcaaatacagcagaag
ttgtttcaacagcagttagatcagaaaacccctcacaggcgaaggcaaagtagctcccca
ggggcgaaaaatggttcaagcgtcagtgggtatcagtcaccaaatatttcacagcagacg
caaaaagggaatgagcagacgccacctgacagtggtcaaagtcagatggaatgggtggtg
aagcgtcgaccagatggaacgagatacattacacgtcgtcaagtaaaaagcaaaatgttg
aaagaaagggcgaagaaaatttccgaggagagatgtggtatgacgactgatgacgacgct
atgagtgaactgaaaactgggagatactggacaaaggaggagaggaagagacatctagaa
aaagctcgggactataaacgccgtcgtgaaatgatggctcgagctaaaatggaaactgtg
aaagaagcagatgagaaaaaagacattgttgagttgagtcatagaaaaatgaacaaacac
aagggcaagaaagtgctggatgactttacgacagtgcaggagatgatggcccatggtaac
aagggttctgacagtagcaagaattacaaacctttactttcggtcactacagtgtga
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