Mya arenaria (softshell): 128217709
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Entry
128217709 CDS
T09995
Name
(RefSeq) m7GpppX diphosphatase-like isoform X1
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128217709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128217709
Enzymes [BR:
maea01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
128217709
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
128217709
3'-5' decay
Other 3'-5' decay factors
128217709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF5105
Motif
Other DBs
NCBI-GeneID:
128217709
NCBI-ProteinID:
XP_052780996
LinkDB
All DBs
Position
14:complement(12759525..12761785)
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AA seq
321 aa
AA seq
DB search
MDRKKRKLESGDRQDDDRLRILDSFEGFKVKSVISENSRCKTAVIHGELDGKDAIVLLER
KPFNLSNVSNYFTEETGLENTLKNDIYGTYDAYPPKVENAVKAVVIHPATEKHVQKYTDQ
ERYIVHETPSLYEQVTLPLITSKQFSIQWVYNILEKKKEADRIVYEDTDPDTGFILLPDM
KWDRTDTSALYLVAIVHKHNIKSLRDLDTGSLPLLQNILKKGLKAIQDTYDIPASKLNVY
IHYQPSYYHFHVHFTNVKFEAPGFGADRAHLLADVINNIQLYGDFYKKKTLTFLVREQED
LYMKFKDAGYFDCSEEVSVEK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaagaaaagaaaactggaatctggtgatcggcaggacgacgaccgccttcgt
atattggacagttttgagggttttaaagtgaagagcgtgatcagtgaaaactcgcgatgc
aaaacggctgtcatccacggggagctggacgggaaagacgccattgttttgttggaaaga
aaaccattcaacctcagtaatgttagcaactactttacggaggaaacaggtttagagaat
acattgaagaatgacatttatggaacttatgatgcatatccaccgaaagtagagaatgct
gtgaaggcggtggtgattcaccctgccacagagaaacatgtgcagaagtacacagaccag
gagcgatacattgtgcatgagacacccagtctatatgaacaggtgacactgccactcatc
acaagcaaacagttcagcatacagtgggtgtacaacatactggagaagaagaaggaggct
gatcgtattgtgtatgaggacacagaccctgacacagggttcatcctgctgccagacatg
aagtgggaccgaacagacacaagtgccctgtacctggtagcaattgtccacaaacataac
atcaagtctttgcgagacctggacacagggagccttccgctgctgcaaaatatactcaag
aaagggctgaaagctattcaggacacctatgacattccagccagcaaactgaatgtttac
atccattaccagccgtcatactaccattttcatgtgcatttcaccaatgttaagttcgaa
gcaccggggttcggagctgatagggctcatcttctggctgatgtaattaacaatatacag
ttgtatggcgacttctacaagaaaaagacgctgacgttcctcgtaagagagcaagaagac
ttgtacatgaagtttaaagatgcaggatactttgattgctctgaagaagtctctgtagaa
aaataa
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