Mya arenaria (softshell): 128217843
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Entry
128217843 CDS
T09995
Name
(RefSeq) orphan steroid hormone receptor 2-like isoform X1
KO
K08544
testicular receptor 4
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128217843
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128217843
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
128217843
Nuclear receptors [BR:
maea03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
128217843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
128217843
NCBI-ProteinID:
XP_052781211
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All DBs
Position
14:complement(48635498..48686762)
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AA seq
731 aa
AA seq
DB search
MSCESEGVSSSSGIRGSNPARHVLVMDSALPENFIHVLSPQMGIPVVAGTTGSSSLITIA
PGGLTLPVSIAAATSAGLSSNGGTPLMVSADFASKLNKEMVSPQVIQIPTGSVDWASKLK
ELQQQQRIEGLVLPKVCRYSVTDSSQTFHVNLNSDITVADQHAVRLERLREEREKLLAAG
TQKQQFENKFEPCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYACRGNKDCPVTKP
NRNRCQYCRLQKCLGIGMRSESVQQERKPSDKEKLSPTMVSTASQKIYIRKDLQSPSTAI
PMFGQRDEDQAVRVSPGLFQGILEQGGDAGSQSTANLLASLQERLVPTDQGPLVLGTTTT
SNTDLSTLANVVTTLALMGGKTEGDQPVSNGDPTDVNQSVAKAFDTLAKAIQPQSNTSQD
ASLNTDQSSSDYAEMADEGCIEIEGPILTRQNFVFSLTTPSPMPAYLNVHYICESASRLL
FLSMHWTRSIAAFNVLSSDVQTLLVRSCWSGLFTLGLAQHAETMSLSTMLMAILNHLQSS
MESDKAVGDKVKSVIEHILKLQSYIQKMQALQVDNQEYAYLKALLLFSPDNPSLPNTGQV
EKIQEKVQNEFQQYLQESLPDDSDRLSKLLLRLPPLHALQANIMEELFFAGLIGNVQIDS
IIPYILRMETAEYNSQLGSSGLTSNLSFPISTDATMLNSQADQTFTTGNSFLINPQLIVT
QAGLTTDSLNS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcgagtctgagggtgtcagctcatctagcgggattcggggctcaaacccagcc
aggcacgtgcttgtcatggactcggcgctgccagaaaacttcatacatgtcctctctcca
cagatgggaatccctgttgttgccgggacgacaggaagtagctccctcatcacgatcgct
cccggcggattgacacttccagtgtccattgctgcagctacatctgctggtttgtcatcg
aatggtggaactccgctgatggtaagcgcagactttgccagcaaactgaacaaggagatg
gtctcgccccaggttatccagatacccactggctcggtggactgggcttcaaaactaaag
gaactacaacagcaacagagaattgaaggcctcgttttgccaaaggtgtgtagatattca
gtgactgattccagccagacttttcatgtgaacttgaatagcgacattactgtggccgac
cagcatgccgtgcgtctggagagacttcgagaagagagagagaagttgttggccgccggt
acacagaaacaacagtttgagaacaagtttgaaccatgtctcgtgtgtggggaccgggct
tcaggtcgccattatggagccatcagttgtgagggctgtaagggtttcttcaagcgaagt
atccgcaaacagttgggctacgcatgtcgcgggaacaaagactgtccggtgacaaaaccc
aacaggaaccggtgtcagtattgtcgcctgcagaaatgtcttgggattggaatgagatct
gaatctgtgcagcaggagcggaagccatcggacaaggaaaagctgtccccgacaatggtc
tccacagcgtcacagaaaatctacatacgtaaagatctgcagagcccgtccacagcaata
ccaatgttcgggcagcgagacgaggaccaagcagtgcgtgtatcaccaggcctttttcaa
ggcattttggaacaaggtggtgatgccgggagccagtctacagccaacttattggccagc
ctccaggagcggctggttcccacagaccagggcccattggttctcggcacaacaactaca
tcaaatacagatctgagtacattagcaaatgttgtaacaaccctggcattgatgggtggt
aagactgaaggggaccagccagtttccaacggtgaccctacggatgtcaaccagtcagtc
gcgaaagcgtttgatacactggcgaaagctatacaaccacagtccaatacgagccaggat
gctagtttaaatacggaccagtccagttcagattatgctgagatggcagatgaaggatgt
atagaaatagaagggcccatcctgactcgacagaactttgtattctcgttgacgaccccg
tctcccatgccagcgtatctaaacgtccattatatatgtgaaagtgcctctcgtcttctc
tttctgtccatgcattggacgcgctcaatagcagcttttaatgtgctctcgtctgacgtg
cagactttgttggttcggagttgttggagcggactgttcactcttggtttggcccaacat
gccgagaccatgtcgctctccaccatgctgatggccattctcaaccatctacagtcttcc
atggagtcagacaaggcggttggggacaaggtgaaaagtgtgatagaacacattttgaag
ctacagagctacatccagaagatgcaggctctccaggtggacaaccaagagtatgcttat
ctcaaggcactcctgctgttctctccagacaatccatcacttcccaatacaggacaggtg
gagaaaatccaagagaaggttcagaatgagttccagcagtatttgcaagaatcattacca
gatgactctgacagactgtccaaacttctgttgcgattaccccccttgcatgctcttcaa
gctaatatcatggaggagttgttctttgcggggcttatcggcaacgtacaaatagacagt
attattccgtacattctgcgaatggaaactgcagaatacaattcccagcttggtagctct
ggtttgacgagcaatttgagtttcccgatctccactgatgccacaatgttgaattcacaa
gcggaccagacattcacaacaggaaattcattcttgattaacccacaactgatcgttact
caagccggtttaacaactgattcattaaacagctga
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