Mya arenaria (softshell): 128217879
Help
Entry
128217879 CDS
T09995
Name
(RefSeq) plexin-A1-like isoform X1
KO
K06820
plexin A
Organism
maea
Mya arenaria (softshell)
Pathway
maea04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128217879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_plexin
LapA_dom
Motif
Other DBs
NCBI-GeneID:
128217879
NCBI-ProteinID:
XP_052781274
LinkDB
All DBs
Position
14:complement(25417046..25528883)
Genome browser
AA seq
1857 aa
AA seq
DB search
MELQIALQLCLLLCLFYFGTSIRPPVNLVLNNPSNMLYYNGSLFIGAMDKLLEIDEKKFS
VIQNGSTCVDLCVDVNHNKVLLLNKQQHQLITCGTANEGRCEIRGIRNLNTIIKRSGSGG
NDDFKIPVSLSSPVQAFVDDNSFIPFAMSDRSVPLQILDTNFTLRSIGIGGRTITFLGNY
SVKFKAAFHHNGFYYFFTNQKRHKNSMEMVSKIIRICSNDASMRSYIDTILSCSQHGVVY
NILQDVALLQTDVRTLHFVAAFTKQLVSDSGSILCTISFDKINEEVNQAKIKFVVNKTGS
GIDESDHYLKEDIIYNLSNETEAAGFLKPEFLCKEDSNNMHLAVGANPIELDYAASTSKS
DGWITKLHSTMINGFPVLVAGTGNVAGLKPSIIKYVLDDGKLLRYHSFNVTLTGYKDEVK
ALYQKNETDHSLFVMTSKGVEKFGTEEDCNSYEGTDCKTIDFSGRKNPLCGWCVFKQRVT
LKSECSTKKNHWLSPLGSCLSANLHPKAVSINHSTSNVTINISIPYLPTESGSEYKCSFG
DTEEVNAQQFGEIFSCQLRMKTEHSYEMLKFKVNTTVIAEEKFLFYDCSKVLKCGECVNI
PGEASEDCVWCPLKGECKQVTDNINDTCEGLQGINTFASCPQLSNNKIYVHTDEETPIPI
ATMNFMSLQNNQSHEYKIVYKNLSNICTREAGENINCSFIVQSKEPYQRFNLSVWYKHQG
SSKWVQVDDIHNTEVAVYSCRKLAEGKCNVCFALKDEFPCNWNNTGCVYDRASSDEAICP
DPTITSIYPLDGPKGGSTKLTVLGEELGSCNKTFIETLSVNNTVNALGCQVNQSICNTTI
HLKEKVRTGLICITYYTLTEPVSDGKINMYTKEDKFENNITSSTNFISKEPDLFEPNINP
AFGPAMGGTVITMKGSNICIGNGRISAYVVDDNKRTHVMDQCLCLKGLSGPDTLVCTMTK
TDKEPPVLARKLYLVVDDKEFHFEIYYEFKTNPTVKVIDPVIGFMSGGTIITVSGDDLKN
GHDAFIIAKFDFAETKEKCEFDNNSTTTMHCPVPKAPESVLQMLNSTNSETKRRRRREAC
SECLSVEIVIKIDGVEKTFSLTYYHDPSFSKFDGTKLFSSKDQYLTIEGNDLNLVAGTSD
YKITIGIEDCKMIEVNKNYMTCAAPRNQPKASQPGQLPEVNVKVGNIHTTLGYIQYQQEL
NIILIIAGASGGAAVFLLVMVIFVCKYRKVGSKAKALEKQLNNLELEIKHVAKEEFLDMQ
TSMSTVNRNLIEQGFPYHSYQQYACNAMFATDYLMSDPVVSSYKMSDELRARARTGMERF
QGLLENKFFLVSLITTMEKQKHFFIKEKSNFAGNLCAIMMGRMDYMHEVLQVLITQLVED
PSSKRGVKSLFRRSESITEKLLSNWLSLCLYPHLKDHTGSLLYLLYIATRKTMEAGPIDA
LTNDAKYTLSEEKLLRKYQGSATDEETTDVKFEAKALTLNVVVDNGEEIYPCKALDCDTV
NQVKAKCLDQIYVNYPASQLPVDPTELLLEWHAGFSGRMILRDKDNTSKRDGEWIRVNTL
AHYAVADQSNMALVDPRNAELSQQEDYVNLAQIDPGFDVNSMGSDQPLTAECSTSHDEEN
PMELKQWHLLKDDDANKKEKSAIDQLYLNRLITTKLSLVKYIDDLFSLVLESSKCPPPVK
FLYDFLDDLAEKQKIDPDTLHAWKSHSYSIRIWAMLIKTPSILFDINAPSYVSESLDVIS
QVFIESFSRTEQAVSKESPTQKLIFRNELTNFRTHVQEFYKNVKENVQKPDELGQYLTSI
NRNQQETTFNKNAALYRLYEQIKPYTDEILDDLSICQETRCLQLNKKIDDIFSMMEE
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcagattgcacttcagctttgccttctactctgtctattttattttggtaca
tcaattcgtccaccggtcaacttagtgttaaacaatccatcaaacatgctgtactacaat
ggatctctgttcataggagctatggacaaacttttagaaatcgatgaaaaaaaattcagt
gtgattcaaaatggctctacttgcgtagatctttgtgtggacgtaaaccataataaggtt
ttattgttgaacaagcaacaacatcagttgataacatgtggaacagcgaatgaaggaaga
tgtgaaattcgtggaatacgaaatctgaacacaataataaagagaagtggttcaggtggc
aatgacgattttaaaattccagtgtcactctcttcaccagtgcaggcatttgttgatgat
aacagtttcattccttttgccatgtctgacagatcggtacctctccagattttggatact
aattttacacttaggagcattggtattggtggtagaactattacttttctaggaaattac
tctgttaaattcaaagctgcttttcaccacaatggattttattacttttttacgaaccag
aaaaggcacaaaaactcgatggaaatggtctccaaaataattagaatttgttccaatgat
gccagcatgcgttcctacatcgatacaattctgtcatgttcacaacatggtgttgtttac
aacatattgcaagatgttgcattattacaaacagatgttcgaactttgcattttgttgca
gcttttacaaaacaattggtgtctgactctggaagcattttatgtacaataagctttgat
aaaatcaatgaagaagttaatcaagctaaaattaaatttgttgtgaacaaaactggctct
ggtattgatgaatcagatcactatttgaaggaggatataatatataatctatcaaatgag
acagaagcagcaggatttttaaaaccagagttcctatgtaaagaggattctaataacatg
catcttgctgtgggtgcaaatcccattgaattagattatgctgcctctactagcaaatct
gatggctggatcaccaagttgcattccactatgatcaatggatttcctgttcttgtagca
ggaactggaaatgttgctggtttaaaaccatcaatcataaagtatgtacttgatgatgga
aaacttttgagatatcatagctttaatgtgacattaactggctacaaagatgaagtgaag
gcattgtatcagaaaaatgaaactgaccattccctgtttgtgatgacttcaaagggggtg
gaaaaatttggaactgaagaagactgtaatagttatgaaggaaccgattgcaaaacaatt
gattttagcggaaggaagaaccctctttgtggatggtgtgtgtttaaacaacgagtgacc
ttgaaatccgaatgcagcactaaaaagaatcactggctttcccctcttggctcatgtctg
tctgcaaatctacatccaaaagcagtctcaataaaccactcaacatcgaatgttacaata
aacataagcatcccatatttgccaacggaatcaggatctgaatacaaatgtagctttgga
gacactgaagaagtaaatgcgcaacagtttggagagattttcagttgtcaacttcgcatg
aaaacagagcatagttatgaaatgttgaagttcaaagtgaacactactgtgattgctgag
gagaaatttctattttacgactgttctaaagtactaaaatgtggcgaatgcgttaatata
cctggagaagcgagtgaggactgtgtctggtgtccactcaaaggagaatgcaaacaagtt
actgataatataaatgatacttgtgaaggtctacaagggataaatacgtttgctagttgc
ccgcagcttagcaataacaagatttatgttcacacagatgaggagacacctattcctatt
gcaacaatgaattttatgtcactacaaaataaccaatcacacgaatataaaatagtctat
aaaaacctgagtaacatctgtacgagggaagctggtgaaaatataaattgcagctttata
gtacagtctaaggaaccttaccaaagattcaatttatctgtgtggtacaagcatcaagga
agttcgaagtgggtgcaggtggatgatattcacaacacagaagttgccgtgtacagttgt
agaaaattggcagagggcaaatgcaacgtttgctttgcactcaaagatgagtttccttgt
aattggaataacaccggttgtgtgtatgatcgagctagtagtgatgaagctatatgccca
gatcctactatcacaagtatatatccactggatggaccaaaagggggttcaacaaaactt
accgttttgggagaagagcttggtagttgcaataaaacctttattgaaacactttcggtg
aataatacagtaaatgccttgggatgtcaagtaaatcaaagcatctgtaacacaacaatt
catttgaaggaaaaggtcagaactggactgatctgtataacttattatacattgacggag
ccagtaagcgacggcaaaatcaatatgtacaccaaagaagataaatttgaaaataatatc
accagcagcaccaattttatatcgaaggaacctgatttatttgagcctaatattaatcca
gcatttggacccgcaatgggaggaacagtgataacgatgaagggaagtaatatctgcatt
ggtaatggaaggatatctgcatacgttgtagatgataacaaacgaacacatgtgatggat
caatgtctttgtttaaaaggactgagtggcccagatacacttgtttgcaccatgacaaag
actgacaaagagcctcctgtcttagcgaggaaattatatctggttgttgacgataaagaa
ttccatttcgagatttattatgaattcaaaacaaatccaactgtaaaagttatcgatcca
gttataggatttatgagtggtggaacaattataactgtttctggtgatgacctgaaaaat
ggacatgacgcttttataattgcaaaatttgattttgcagagacgaaagaaaaatgtgag
ttcgataataattccacaacaactatgcactgtcccgttccaaaggcacctgaatctgtg
ctgcaaatgttaaacagtaccaattctgaaacaaaacggcgaagaaggcgtgaagcttgc
tcagagtgcttgtctgtggaaatcgtaatcaaaattgatggagtggaaaagacattcagc
ctaacttattatcatgatccgtccttttcaaaatttgatggaaccaaactattttcctct
aaggatcagtatcttacgatcgagggcaatgatttaaatcttgttgctggcacaagtgac
tacaaaataaccattggcatagaagattgtaaaatgatagaggtgaacaagaattacatg
acctgtgctgcaccacgcaaccagcccaaggcatcccagcctggtcagctaccggaggtt
aatgtaaaagttggaaacatccatacgactttaggatacatccaataccaacaagagctg
aacatcattctaatcattgccggagcatcaggtggagcagcggtgtttcttcttgtgatg
gtgatctttgtctgcaagtatcgaaaggtggggtcaaaagctaaagcattggaaaaacaa
ctcaacaaccttgaactggaaatcaaacatgtggcaaaagaagagttccttgacatgcag
acgtccatgtcaacagttaatcgtaacctcattgagcagggattcccctaccactcgtat
caacagtacgcgtgtaatgccatgttcgctaccgactatctgatgtcagatcctgtagta
agtagttacaagatgtctgatgaactgcgggctcgagcgaggacaggaatggaacgtttc
caaggtctgcttgagaacaagttcttcctcgtttccctaataacgaccatggagaaacag
aaacacttctttatcaaagaaaaatccaattttgctggcaatctatgcgccatcatgatg
ggacgtatggactacatgcatgaagtgttacaagttctgatcacccaattggttgaggac
ccttcttccaaaagaggcgtgaaatcattgttcagaaggagtgagagtatcacggagaag
cttctgagcaactggctgtccctctgtttgtaccctcacctaaaggatcacaccggttca
cttctgtacctgttgtacatcgccacgaggaaaacgatggaggctggccctatcgatgct
ttaaccaatgatgccaagtacacactgtcggaagaaaaactgctccggaaataccaaggc
tcggcaacagacgaggaaacgacggatgtgaagtttgaggctaaagcattgacattgaac
gtagtggtcgacaatggagaggaaatctacccatgtaaagctctcgactgcgacacagtt
aaccaggtgaaagcaaagtgcctcgaccagatctatgtcaactacccggcctcgcaactt
cccgtagatcccactgaacttcttcttgagtggcatgccggattcagcggacgtatgata
cttcgtgataaagacaacacgtccaagcgtgatggtgaatggattcgtgttaacacactg
gcgcactacgcagtggccgaccaaagtaacatggccctcgtagatccacggaatgctgag
ctcagtcagcaggaggattatgtgaacttggcacagattgaccctggcttcgatgtcaac
agtatggggtcagaccaaccgttgacggccgagtgttccacttcgcatgacgaagaaaac
ccgatggaactgaaacagtggcacttgttaaaggatgatgatgcaaacaagaaggagaaa
tctgccattgatcagctgtacttgaacaggcttatcacaacaaagttgtcacttgtgaag
tacattgatgacttgttcagcctggtattggagagcagcaagtgtcctccgcctgtcaag
ttcctctatgatttcctggatgatcttgcagaaaaacaaaaaatagatcccgacacacta
catgcgtggaaaagccatagctactccattcgcatctgggccatgcttatcaagacaccg
tcaattctgttcgatatcaatgccccgtcctatgtttcggagagtctggatgtgatcagt
caagtcttcattgagagcttcagtcgcacggaacaggccgtgtcaaaggaatcgccaact
cagaagcttattttccgaaatgagctgacgaatttcagaacacatgttcaggagttctac
aaaaatgtcaaagagaacgtgcagaaacccgatgagctaggacaatacctgacaagtatt
aacagaaaccaacaggaaactactttcaacaagaacgcagcactttacagattatacgag
cagatcaagccatatacagacgagattctagacgacctgtcaatctgccaagagaccaga
tgtctgcagttgaacaagaagatagatgacatattctctatgatggaagaatag
DBGET
integrated database retrieval system