Mya arenaria (softshell): 128217984
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Entry
128217984 CDS
T09995
Name
(RefSeq) cartilage intermediate layer protein 1-like isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
maea04990
]
128217984
Domain-containing proteins not elsewhere classified [BR:
maea04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
128217984
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
CILP_5th
Ig_3
CILP_C
Ig_2
I-set
TSP1_spondin
CILP
CarbopepD_reg_2
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
128217984
NCBI-ProteinID:
XP_052781429
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Position
14:27479448..27490677
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AA seq
1215 aa
AA seq
DB search
MNHGRECPAGNELEGLSEEDYTNLFQTRDDHTYTELSSVELNAISEQVYRNTNENESRHI
DTNASPTEINTTKKKIWIFAFVAILLASVAVVAVVISQTSIDETIIKLASPRPLDVSTEL
TSTLAVTENITTTTTTTSKTTDENLSTSTLTSTSTLSSKSTSIPTTTTDTHTFDTSIVTP
GSTTDLSAVRWSLWGEWTRCSSTCASGIHKRYRQCIASPCSGDYIETEICTSSPCPVFGK
WMTWASWGACDVTCGGGAQTRTRECQKNDPSDIDCVGGNSQQQTCSTWDCPDCSKTCSVG
TLNGECDTCECSLTTKGRVLATSSRNPVSGASIFAATAPTRPLAITNSTGFFILDTTCTG
TDIIIKKDGYNDSLTQITTEYNILNISKIVTPHFIQTPMSKKRLVGESLSLCCQADGLPE
IDYYEWFQNSQLLDTALYPNATLLNIDNVRETHSGQYQCRANSPAGAIMSTAVNIQIRET
PDDFCTKSLRQKAFALPSDCVQEATNTATFEVGECIAQTCRQNGSIDVQTCGEGSHSCCS
VKESKLETVQCSGYTMQVVVVNKCGCGPCSSNTFTISGTALSALDKSPVKYLYVYVNGEF
NSYTDKRGYFTVTVDAFASPLTLNLVDKYNKQFLPAVKRIAISEGFSGTMKVEVNLVPVA
SPIEIDASIENTLNARSESNTHAPNAEIVIPAGSFYDENGEYYNGTVSASFTFLDTSNTS
NIEQLPGVFRSIDAEGETNNLDSLGVFNLYFRDNGGNPLSLGEEIEIKFPVNTSPDILDM
DFQLWSLNTDTGVWEQISIYSQSSRRKKRQLSTEWIGNINLSDFEYYKWFNIDQLRDNYE
TVCYFKTRFYKDRNLTLDVNDPERNYELEMLSTANGILTTIYGYVRHPDDECIPVGCDQS
INMYISSFYNSRTNYEHLYAAGPAINTGQYFHIQEDEKAIKISIQSSSNGPFYDDENVCI
QSSSNPLQFYHGYTGPSRYIPVEFCSQYASSPPDEKEPLCRLAWYPYRDQPKYVEDGYKV
CKAKVKVSLRDGFKLDPGQFISLKVTSYGGNESEIANIYLGSLEYDIDVNDSKNILCVEY
KCSGMYDPGFENRFDKTEVKIVLRYPKSEIHCNVVDKSDDLPFTQVNRSDGIFEFEAPDT
YGPNNGLYSATSGLTGEVKTVYALKIIQRNTELKCKSTEQTKGNTDVVDDGYAVHFRCYR
CGSFNADGIFFFHPC
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacggaagagaatgccctgcggggaatgaacttgaaggacttagtgaagaagac
tataccaatcttttccagacaagagacgatcacacgtacactgaactaagtagtgttgag
cttaacgctatatcggagcaggtctatcggaatacaaatgaaaatgagtccaggcacatc
gacaccaatgcgtcaccaacggaaatcaacaccacgaaaaaaaagatatggatattcgcg
tttgtcgcgattttactagcatctgtggctgttgtggctgtagtgatttcacaaacctca
atagatgaaacaatcatcaaattggcgtcgcctcgacccctggatgtttccactgagctg
acttccacactggcagtaacggaaaatattactactactactactacaacatcgaaaacc
acagacgaaaatttatcgacgtccactttaacaagcacaagtacactttcaagcaaaagt
acaagcataccaactacaacaacggatacacacacatttgacacttcaatagttacacca
ggttcgacaacagatttatcagccgtaagatggtcactatggggtgaatggactcggtgt
tcatctacctgcgcatcagggatccacaagcgataccgccaatgtattgcaagtccgtgc
agcggcgactacatagaaacagagatctgtacttcatctccttgtccagtttttggaaaa
tggatgacctgggcttcgtggggcgcttgtgatgtaacctgcggcggcggtgctcaaacg
cgtacacgagaatgccaaaagaacgatccctccgacatcgattgtgttggtggaaattcg
cagcaacagacatgttcgacttgggattgtccagattgttccaaaacctgttctgttggg
acactaaatggggaatgtgacacgtgtgaatgttctttaacaaccaaaggacgcgtgcta
gcaacttcttcaagaaacccagtgtccggagcatcaattttcgctgctaccgccccgaca
cgaccattggcaataacaaattcgacaggctttttcattcttgataccacatgtactggt
acagacatcatcataaagaaagatggctacaacgactctttgacacagataacaacagaa
tataacattctgaacatttcaaaaatcgtgacccctcactttatccagacaccgatgagc
aagaagcggcttgttggcgaatccctctcactgtgctgccaagctgatggacttcctgaa
atagactactacgaatggtttcagaattcccagcttctagacacagccttgtacccaaac
gcaaccctattgaatatcgataatgttcgtgaaacacattccggacaatatcaatgtcgc
gcaaatagccctgctggagccataatgtcgacagcagttaacattcaaatcagagagact
cctgatgatttctgtacaaagtcgttgcgacaaaaagcatttgctcttccaagcgactgt
gtccaagaggccacaaatacagcaacgttcgaggtaggcgagtgcatcgcacaaacatgt
cgacaaaatggttcaatagatgttcagacttgcggcgaaggttcacattcttgctgctcc
gtaaaagaatcaaaactcgaaactgtgcaatgctcaggttacacaatgcaagttgtcgtt
gtaaacaaatgtggatgtggaccttgttcatcaaacacattcacaatatctggaacggct
ctttcggcacttgataaatctcctgtcaaatacctgtatgtatatgtcaatggggagttt
aattcttacaccgataagaggggttacttcactgtcactgtagacgcatttgcatctcca
ctaactttgaatttggtggataagtacaacaagcagtttctgcccgccgttaaacgaata
gctatatctgagggctttagtggaacaatgaaagttgaagttaatctagttccggtcgct
tcacccatagaaattgatgcttcgattgaaaacacgcttaatgcacgctcagaatcaaac
acgcatgcgcctaatgctgagatagtaattccggcgggctcattttatgacgagaacggt
gaatactataatggtaccgtttctgcaagctttacttttttagatacatcaaacacatct
aatatagaacagttgccaggagtgttcagatcaatagacgctgaaggtgaaacaaataat
cttgactcgttaggcgtttttaatctatattttcgagataacggaggaaaccccttatca
ctcggcgaggaaatagaaatcaaatttccggtaaatacttcacctgacatattagatatg
gattttcaactgtggagtttaaacacagacacaggcgtttgggagcagataagtatttat
tctcaatcttcaagaagaaagaaacgacaattatctacggagtggattgggaatattaat
ttatctgactttgaatattataaatggttcaatattgatcagctaagagacaattatgaa
acagtttgttattttaaaacccggttttacaaggataggaacctaacactcgatgttaac
gaccctgaaaggaactatgagcttgaaatgctatcaactgcaaatgggatactcacaacg
atctacggttatgttaggcaccccgacgacgaatgtataccggtcggttgtgatcaaagt
attaacatgtacatatccagtttttacaacagcaggaccaattatgaacatctctatgcc
gctggccctgccatcaacacaggacagtattttcatatacaagaagacgaaaaagcaatc
aaaatatcaattcagtcatcatcaaatgggccattttatgacgatgagaatgtatgtata
caatcttcatctaaccctttgcaattttaccatgggtacactggtccatctcgatatata
cctgtagagttttgttctcagtatgcttcaagtcctcctgatgagaaagagcccctttgt
cgtctagcatggtatccatacagggatcaacctaaatacgtagaggatggctacaaagtt
tgtaaagcgaaggttaaagtaagccttcgcgatggatttaaactcgatcccggccaattc
atctctttaaaagtaacgagctatggtgggaatgagtctgaaatagcaaatatatacctt
ggttctttagaatacgacatagatgttaacgacagtaaaaatatactctgcgttgagtac
aaatgtagcggaatgtacgatccgggatttgaaaacaggtttgataaaactgaagttaaa
attgttcttagatatccaaaaagtgaaattcattgtaacgtcgttgacaaatcagacgat
ctaccctttacacaagttaaccgaagcgatggcatattcgagttcgaggcacccgacaca
tacggtccaaacaatggcctgtactcggcaacatctgggttaactggcgaggtcaagaca
gtctatgctcttaaaatcatacagagaaataccgaactgaaatgcaaatctacagagcaa
acaaaagggaatactgatgtcgttgatgacgggtatgctgttcattttcgatgctacaga
tgtggttcttttaatgcggacggaatatttttcttccatccttgctga
DBGET
integrated database retrieval system
