Mya arenaria (softshell): 128218054
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Entry
128218054 CDS
T09995
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08532
RAR-related orphan receptor alpha
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128218054
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
maea03310
]
128218054
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128218054
Nuclear receptors [BR:
maea03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
128218054
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7129
Motif
Other DBs
NCBI-GeneID:
128218054
NCBI-ProteinID:
XP_052781533
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All DBs
Position
14:45484903..45503828
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AA seq
653 aa
AA seq
DB search
MSDNQYLPRDVPSATKSRRRRERNVDPGAPSTPLPACRVCGDRSSGLHYGVNTCEACKGF
FKRTLRKTTMDLPCGCKAVVKGQWRQGPVKNGCSACRYQRCLAVGMSRHAIKIGRYSLER
KTNNILESKREKQGLDQGILSDLHPPNGAVGNPPNGAAGKECNSKSCAQEMDNALATDCV
DDIDAFIESLLGVDGQTGENSSTVASGAVCQKRLENTTVGTARVSAEMINGQMPEELAGL
VGTLTAAHLATMEVDARSREEITRLQTSCLEKYQIKTEIFGKMKVLSTTEYNNFFKATGL
DIDGRGEHVQKALTFIQGRISSSVTFAKAIPCFRDLPLPDQVSLIKASRSENELMSSYRN
IYTSIDMERQVVAMPWGREYHLAEVDKSVPAEIVVGRWQAADRIVELALTAQEEALIRAL
SVVSPDRCDLLDPGRVNAIQDRCVMCLHHLFETSPKAWNSPSGAGKSRPGAVKSTPEVGY
SQPGARVSPTETVQSQSERGSKPPEAGNSPLGAGNLLLAAMKSPPEAGNSPLGAGNLLPA
AMKSPLAAEKLPPVVEKSQPGSGESPQEAQKSTPGAVKSPPEEGNSPQGVGKSLLPAEKS
SPVLGNRLGKVFSLLTFCRNLSERESEIAQELIINPPAFIDDRAFPLFKEFFL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaatcaatatcttccacgcgatgtcccgagcgcgacaaagagtcgtcggcgc
cgtgaacgcaatgtggacccgggcgcgccgtcgacgccgcttccggcgtgtcgcgtgtgt
ggggacaggtcatccggtctccattatggcgtcaacacgtgcgaggcatgtaagggattc
tttaagcggacactccgtaaaacgacaatggacttgccatgtggatgcaaggcggtggtc
aagggtcagtggcgccaggggcctgttaagaacggatgttccgcctgtcgctaccagcgc
tgtcttgccgtgggcatgtcgagacacgcaattaaaattggacgatactctttggagcga
aaaaccaacaatattctagaatcaaaacgtgaaaaacaaggacttgaccaaggtatattg
agcgaccttcatcctccgaatggagcggttggcaatcctccgaatggagcggctggcaaa
gagtgcaattctaagtcatgtgctcaagaaatggacaatgccttggcgacggattgtgta
gatgacattgatgcttttatagaaagcttacttggtgtagatggtcaaacgggagaaaat
tcttcaacagtagcaagtggtgcggtgtgtcagaaaagattggaaaatactaccgttgga
acagcaagggtttctgcagaaatgataaatggacagatgccagaggagctggcgggactg
gtggggaccctgacggccgctcacctcgccaccatggaagtggatgccaggagccgggag
gagatcacgcgactacagacttcatgtcttgaaaaataccagattaagacggaaatcttt
gggaaaatgaaggttttatcgacaacggagtacaataatttcttcaaagcaacaggttta
gatatagatggacgtggcgagcacgtgcaaaaagccctgacgtttattcagggcagaatt
tcttcgtctgtgacattcgccaaggccattccctgcttccgggatctgcccttaccggac
caggtcagccttattaaagcgtctcggtcggaaaacgagcttatgagtagctatcgaaac
atttacaccagtattgacatggagcgtcaggtggtcgctatgccttggggacgcgagtac
catctagcggaagtagacaagtccgtgcctgcagaaatcgtcgtcgggcgctggcaggcg
gcggatcgaattgttgagctggcgcttacggcacaggaagaggcgctaatcagggcgctt
tcagtcgtatctccagatcggtgcgatttgttggacccaggtagagttaatgccatacaa
gacagatgtgttatgtgtcttcatcacctttttgagacatcaccgaaggcatggaactca
ccgtcaggcgcggggaagtcacggccgggggcggtgaagtcaacaccggaggtagggtac
tcacaaccaggggcgagagtgtcaccaacagagacggtgcagtcacaatcagagcggggg
agtaaaccaccagaggcgggaaattcaccattaggggctgggaatttactactagcggcg
atgaagtcaccaccagaggcgggaaattcaccattaggggctgggaatttactaccagcg
gcgatgaagtcaccactagcggcggagaagttaccaccagtggttgagaaatcacaaccc
ggatcgggagagtcaccacaagaggcacagaagtcaacaccaggggcggtaaagtcacca
ccagaagaagggaactcaccacaaggggtggggaagtcactactaccggcggagaagtca
tcaccagtattgggaaatcgactaggaaaggtgttctcgttactgaccttttgcaggaat
ttaagtgaaagagaatcagaaatagctcaagagctgatcataaatcctccagcctttata
gatgaccgtgcttttccactgtttaaggagttctttttatga
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