Mya arenaria (softshell): 128218158
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Entry
128218158 CDS
T09995
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128218158
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
Transposable elements
128218158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
HTH_23
DDE_Tnp_1_2
HTH_Tnp_4
HTH_IclR
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
128218158
NCBI-ProteinID:
XP_052781689
LinkDB
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Position
14:complement(38932485..38935949)
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AA seq
258 aa
AA seq
DB search
MFACYSHINIEKLFQVLVGLRCLAKGAFFSEVADTHGVSRSSVCRIIHGFVDAVINNVDN
IKFPVQRDDQMSVKRGFYRKCKFPNIVGAVDGTLVPILAPTANEESFVCRKGFHAINCQA
VASSDLRFIDIVAKWPGSSHDAGVFDNSVLKDYLEADLEAVLLGDSGYPLRRYLITPILH
PSNENEERYNRRHKTAREVVERAFGVLKSRFRCLHRSGGVLPFSPGKSCRVFLACCKLHN
LCIDNNMPLPALCQQFPL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgtgttattctcatattaacattgagaaattatttcaggttcttgttggtctc
cggtgcctggcaaaaggtgcctttttttcggaggttgctgacacacacggagtgagcaga
tcgagtgtctgcagaattatccatggatttgtcgatgctgtaatcaacaacgttgacaat
atcaagtttcctgttcagagggatgaccagatgtcagtgaagaggggtttctacaggaag
tgtaaattcccaaacattgtaggtgctgttgatggtactttagtaccgattctggcccca
acagcaaatgaagagtcattcgtatgccgtaaggggtttcatgccatcaattgccaagca
gtggcttcctcagacttgagattcattgacatagtggcaaagtggcctggttcctcacat
gatgctggtgtttttgacaattcggtgttaaaggactatctagaagcagacttggaggct
gtacttctaggcgacagtgggtacccgctgaggcgttatttaattactcctattctgcac
ccatcaaatgagaatgaggagaggtacaacagacgccacaagactgcaagagaagttgtt
gagagggcttttggtgttttgaagtcaagatttagatgcctacacagatcggggggtgtg
ctgccattttcaccaggaaagagctgtcgggtttttttagcctgctgtaaactacacaat
ctgtgtattgacaacaatatgccacttcctgctctctgccaacagttccctctgtaa
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