Mya arenaria (softshell): 128218168
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Entry
128218168 CDS
T09995
Name
(RefSeq) kinesin-related protein 4-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128218168
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128218168
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128218168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
128218168
NCBI-ProteinID:
XP_052781701
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All DBs
Position
14:62482655..62511653
Genome browser
AA seq
1253 aa
AA seq
DB search
MASVAHKFQEKARTGDVILSEAVTFDGLLLSKQVLNGLKNSGFERPSPIQLKAIPLGRCG
LDLIVQAKSGTGKTCVFSVIALESVRVDTSSTQVLVLAPTREIAVQIWEVINSIGSATSG
LLCHTFIGGLPLQEDRIKLKKCHIAVGTPGRVKQLIEGGVLRTDSIRLFVLDEADKLLEE
SFQEQINWIYSTLPENKQMLALSATYPEYLANHLTAYMRNPTFLRLNITDPALLGIRQFY
TTVPYHPVPHAVFEEKTKVLIHLLSSVSFQQCLVFSNLQTRAQTLADVLNSKGWPTACIA
GCLDQKDRNEAMARLKTYKCRILISTDLTSRGIDADKVNMVINLDVPKDHETYLHRIGRA
GRFGSFGIAVSLISDGQEKLNLDSIQKRCNTQINTLPDPLPSDLAHPDGPVYLDDVVSAE
IINTDLTNYKIQTSSGKFNVTDTTHSMKSASPRKLNVTELSMVLASPEKHVSGRPDKQSQ
NGNEGETEEELDGDDDDDDDDDDDDDKNDVNEFEKDGTYENGFITTNGDICEPYVEDEND
EILNAETDIKLHFEIAGDRSDKSSTLRHKEDAGKNETNDTKGMANDPERELISDIKETEC
LIETPVLSGVNRQKNDGASSSTGTKEQTVSVENKTVSFQNHSLTSVVRERLNNTCSSMEK
VRLTDIYKSNIGFKSLRKSHTYSSAIESLLAFRNDVSGVSSAVAKADSCIIPRCKETHPE
LAKLKENITEIQDTLNDGFSGSRSETVRLLAKNNDIKEGEDSGATHFDGPNQMKVAVEEQ
IEITKNSCQKSRIGIEENDSNQTQNERHVEKTQQSLEKASKENVMIYNIVSTGKFRELTV
EECYKKKVHLLETKQEIGPEISSTKNFMSKENRLRSNGMQKKEQKPRRQKQGYHNKFAIG
YLLQQQTMEEKDDVEDEVSADETLKDSEENIEGGSKGSGSTGSAANLIDKHTRIVEDITP
DLSPEKEICPLKRNEFAETLSSFKQSLDEVKGIQDLKSTELVAETKGCFHQKDDDLLTSS
KEPNDETNDVFKLNDDDLCTSSDDSSDDSSDDSMSSSDESDSEREYRNEIKSLMSKRQNS
TSRKSQSYTDNSQHDDKCYSKVSVNGKSFVLTKENKKTQPKESQIGNHLTNGGNYLCRAK
RETTRDSYQEKMETWYTQFQEWQKLYQTPDPNITARSHSHFDYRQNPYYYQHHHHQFYNP
QMQFYSPYQSGRGGGAFHHQSDNWKGASFNDQNQYIKQMCRQPKPVVKKKKEM
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgttgctcacaaattccaggaaaaggctagaactggtgatgttatattgtca
gaagcagtaacatttgatggtttattattgtctaaacaagtgctgaatggattgaaaaat
tctggttttgaacgtccctcaccaatccagttgaaagcaattcctcttggaagatgtggc
ctagacctgattgttcaagccaaatcagggactgggaagacgtgtgtgttctcggttata
gccctggagagtgtcagggttgatacatcatctacacaggtactggtgctagccccaact
cgagagatagccgttcagatttgggaggttatcaacagcattgggagtgcaacttcaggt
ctgttgtgccatacattcatcggtgggctgcctctgcaagaagacaggatcaagctgaag
aaatgccacatagctgtgggtacacctggtcgtgtaaagcagttgattgaagggggagta
ctacggacagacagtattcgtctgtttgttcttgatgaggctgacaaactgctggaagag
agcttccaggaacaaatcaattggatctattccaccctaccagagaacaagcagatgcta
gccctgtctgccacctatccggaatatctggccaatcatctgacagcatacatgagaaac
cccacatttcttcggctgaacatcactgaccctgccttactcggaatacgccagttctat
accaccgtgccctaccaccccgtgcctcatgccgtgtttgaggagaaaaccaaagttctc
atccatcttctgtcatcagtgagcttccaacagtgtttagtcttctctaaccttcagacc
agggcgcagacgttagctgatgtgttaaacagtaagggttggcccacagcgtgtatagct
ggctgcttggatcagaaggaccggaacgaggcaatggccagactcaagacatacaagtgt
aggatcctcatctcaactgatcttacatctcggggtatagacgcagacaaagtgaacatg
gtgatcaacctagacgtccctaaggaccatgagacctaccttcacaggattggacgagcg
gggcgatttggttcgtttggtattgctgtcagccttatcagtgacggccaggaaaaactg
aacttggactccatacagaaacgctgtaacacccagattaacaccttaccagatcccttg
ccaagtgatcttgctcaccctgatggccctgtgtatctggatgacgttgtctctgctgaa
atcatcaacactgaccttacaaattacaagattcagacctcttctgggaaatttaatgtt
actgatacaacacatagcatgaaatcggccagccctaggaagctaaatgttactgaactt
agcatggttctagctagccctgagaaacatgtgagtggtagacctgataagcaaagccaa
aatggaaatgagggggaaactgaagaagaattggatggtgatgatgatgatgatgatgat
gatgatgatgatgatgataaaaatgatgtgaatgagtttgaaaaagatggaacttatgaa
aatggttttattacaactaatggagacatatgtgaaccttatgttgaagatgaaaatgac
gagattttaaatgctgaaactgacattaagttacattttgagattgcgggtgatagatca
gataaaagctcaactttaagacataaagaagatgcaggaaagaatgaaactaatgataca
aagggaatggcaaatgacccagaaagagaattgatctctgacatcaaagaaactgaatgt
cttatagaaacgccagtgctaagtggtgttaatagacaaaaaaatgatggggctagtagt
tctactggaacaaaagaacaaacagtctctgttgaaaacaaaacagtctcctttcagaac
cattcattaacatctgtggttagagagagactgaacaacacatgttcttctatggaaaag
gttagattgacagatatatataagtcaaatataggttttaaatcacttagaaagtcgcat
acttattcatctgcaatagaatctttgttagcatttagaaatgacgtgtctggagtgagt
tcagctgttgcaaaagcggattcctgtatcattccgagatgtaaagaaacccacccagag
ttggcaaagctgaaagaaaacattactgaaatacaagatacattaaatgatggattttca
ggtagcaggtcagaaactgtgagactccttgctaagaacaatgatataaaagagggtgaa
gactcaggcgctactcactttgatggacccaaccaaatgaaggttgcagtggaggagcaa
atagagataacaaagaacagttgtcaaaaatctaggataggcattgaagagaatgattcg
aaccaaacccagaatgagagacatgttgaaaaaacacagcaaagtttggaaaaagctagt
aaagaaaatgtgatgatatataatattgttagcactggtaaatttcgggaattgacagta
gaagaatgttacaagaaaaaagtacatttgctagaaaccaaacaagaaataggtcctgaa
atatcttcaacaaagaattttatgtcaaaggaaaacagactgcgttctaatggaatgcag
aaaaaagaacagaagccaaggagacaaaagcaaggctaccataacaaatttgccatcggt
tatctgcttcaacagcaaacaatggaagagaaggacgatgttgaagatgaagtaagtgct
gatgagacacttaaagattctgaagaaaatatagaaggtggttctaaaggctcaggtagt
acagggtcagcagcaaatttaatagataagcatactagaatagttgaagatataacacca
gatttatcacctgagaaagaaatttgtccattaaaaagaaatgaatttgcagaaactctg
tcaagctttaaacaaagtctggatgaagttaaaggtatccaagacttgaagagtactgag
ctagttgctgaaacaaagggttgctttcaccaaaaagatgatgatttgttaactagctct
aaagagcctaatgacgaaacaaatgatgttttcaagctcaacgatgatgatttatgtact
agctctgatgattcaagtgatgattcaagtgacgattcaatgtcttcaagtgatgaatct
gattctgaaagggaatacagaaatgaaatcaaatcattaatgtccaagagacaaaacagc
acctcaagaaagtctcaatcatacacggacaacagccagcatgatgacaagtgttattca
aaagtatctgttaatggtaagtcatttgtactaacaaaagaaaacaagaaaactcagcct
aaggaaagtcaaattggaaaccatctcacaaatggtggtaattatttatgcagggcaaaa
agagaaacaacaagggattcttatcaggagaaaatggaaacttggtatacgcaatttcaa
gagtggcaaaagttgtatcaaacacctgacccgaacatcacagccagaagtcattctcat
tttgattacagacaaaatccatactattatcaacatcatcaccatcaattctataatccc
cagatgcagttttatagcccatatcagagtggtcgtggtggaggtgcatttcaccatcag
tcagataactggaaaggtgcaagtttcaatgatcagaatcagtatataaagcaaatgtgt
agacaacccaagcctgtggtcaagaaaaagaaagaaatgtga
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