Mya arenaria (softshell): 128218196
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Entry
128218196 CDS
T09995
Name
(RefSeq) transient receptor potential cation channel subfamily V member 5-like isoform X1
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128218196
Ion channels [BR:
maea04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128218196
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_4
Ank_3
PKD_channel
Ank_5
SLS1_N
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128218196
NCBI-ProteinID:
XP_052781744
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All DBs
Position
14:complement(16365821..16426541)
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AA seq
1048 aa
AA seq
DB search
MGNIIRHFEEEDKDSAWQEQNKEIERNPMYKYADLSCQGKLITAYRKGGVVAVQEIARKE
IQPYLKNGGKGAQLTRLGYVKWIRSKEAAKSGSTVWETKSDEELLQEWDEQEKRSLNKVV
DHEVCWDPDKRGGVGETPLHLLYLTDSAEHTETAKILLNMYPKLALDIYEADEYFGESCL
HLATVYGDFESVKLLVSNGAYINQRATGRFFLPEDQKTGQSNETNYQGYAYYGEYPLAFA
VCFGYMDIYDYLIDNGADPNLQDSFGNTALHMAVISDQAEMYKYMVKHHKKPARREIRNH
ANLTPLTLASKLGRHKLFKEILEIHCIDLWRYSNVACSVYPLTEIDSIQSNGEPNLNSAL
MIVINGEEDEHLEMLEGGVMRQLLDDKWKTFARNRFFKRLVLAFVHLILISVSVYLRPAD
NLNSYTKPADAIRFISEIIVCLFCIGYLVLEVIEIGAQGAMAFIKNCGHAPAHTVFMISC
LLILLCIPVRFSGHQQVEDILLILAVPGSWFFLLFFARSVKLTGPFVTMIYRMCKGDLLR
FGIIYLIFLIGFTQGFYFLFRDINQDSFKTLPSTIMTLFQMTLGEFKYHDFDLTRYALLT
KLVFAVFMILVPILLLNMLIAMMGNTYQSVIIKSEKEWRKQWAKIVVVLERGYTRKQLRK
FHQEYSIKLAGPATEDGKEREEIRALVVIKSSPKTKARQRKIAVGNWKKLGHEIILQLKE
QKKKGKSGPLKLQKVARKSKKDGDSDSEDERKFSNITAQLAWERDIDLAKGQAFMKDTNS
VENRNSKQAGIGQMGNGTGVHDRGPDEHTQIPNGNARTIKKYVKRPNGTPRTSPKLTKQF
STNRITPLPVYDNQDDSMNDLIFDVEDGRGHKTQSQTSRSTISDLYGSVMSTRKSADFVD
SDLMIVKTNDKYVNSVTTVKPGNKQDTKHTLEVETSPERVGSAESNSKYDQWADEIIKSS
REPSPNPSPSKSDVINGSPGKSGKHKSKKKKKEKRYLTGKERDKEVKSSRDRERSKSSER
KEHKMKGSKTPTSDELLLGDSDVNESSL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacataattcggcatttcgaggaggaggataaggactcagcatggcaggaacag
aacaaggagatagaacgcaaccctatgtacaagtatgcagacctgtcgtgccaggggaaa
ctcatcacggcatacaggaaggggggtgtcgtggcggtgcaggagatcgcgcggaaagag
attcagccgtaccttaaaaacggggggaaaggcgctcagctgaccaggttgggttacgtt
aaatggatacgatcaaaagaagccgctaaatcgggatccactgtctgggagacaaagtca
gacgaggagttgttacaggaatgggatgagcaggagaagaggagtctgaacaaagtggta
gaccatgaggtttgctgggacccagacaagaggggtggggttggggagacgcccctccac
ctcctttacctcacagatagtgccgaacacaccgagaccgccaaaatattgctcaacatg
taccccaagctggccttggatatctacgaagctgatgaatattttggtgagagttgcctg
caccttgccactgtgtacggagattttgagtctgtgaaactgcttgtgtcaaacggcgcg
tacatcaatcagcgagcgacggggcgcttcttcctgcccgaggaccagaaaactggccag
tccaatgaaacaaactatcagggctatgcatactacggggagtaccccctagcgtttgcg
gtgtgtttcggctatatggacatctatgactacctcatagacaatggggccgacccaaat
ctccaagactcatttggaaacactgccctccacatggctgtcatatcagaccaggccgag
atgtacaagtatatggtgaagcaccacaagaagcctgcccgtcgcgagatccgtaaccat
gccaacctcacgccacttacccttgccagtaaactaggtcgccataaactcttcaaagaa
atcctagaaatacactgtattgacctgtggcgatacagcaatgtagcgtgttctgtctac
cccctcacagagattgactccatacagtcgaatggagagccaaacttaaactctgcgttg
atgatcgtgataaatggggaggaagatgagcacctggagatgttggagggcggagtcatg
cggcaactcctggatgacaaatggaaaacatttgctaggaaccgatttttcaagcgactg
gtgctggcattcgttcatctcattctgatcagcgtgtctgtctatctgagacccgccgac
aatctcaactcatacacaaaacctgcagacgcgatacggttcatatccgagattatagtt
tgtttgttctgtataggttaccttgttttagaagtgatagaaattggcgcacaaggagca
atggcatttataaaaaattgtggacatgctccagcccacactgtgttcatgatctcatgt
ttattgatattgctgtgcatccctgttcgcttctccggtcaccagcaggtggaggatatt
ctcctgattcttgctgtacccggttcctggttcttcctcctcttctttgcaaggagtgtg
aaactaacgggcccatttgttacgatgatttaccgcatgtgtaagggtgatctccttcga
tttggcatcatttacctcatatttcttattggcttcactcaaggtttctactttctgttc
cgtgatatcaaccaagacagcttcaagacgctgccatccaccattatgaccttgttccag
atgaccttgggagaatttaagtaccatgactttgacctgacgcgctatgctctcctgaca
aagctggtgtttgccgtgttcatgattctggttcccatcctcctgctcaacatgctgatt
gccatgatgggaaacacataccagtctgttatcattaagtcagagaaggagtggagaaaa
cagtgggcaaaaatagtagttgtgttggagcggggttataccaggaagcagctacggaag
ttccatcaggaatactctataaagctggccggcccagcaactgaggatgggaaggaacgg
gaagaaatacgagcacttgtggttatcaaatcctcacctaaaactaaggcccggcagcgc
aagattgctgttgggaactggaagaaactggggcacgagatcatattgcagttgaaagaa
cagaaaaagaagggcaaatctgggccccttaaacttcagaaggtggctcgcaagtcaaag
aaagatggtgattcagactcagaggatgagagaaaattctccaacatcacagctcagctg
gcctgggagagagatattgaccttgctaaaggtcaagcatttatgaaggacacaaattcc
gtggaaaaccggaattctaagcaggcaggtataggtcagatgggcaatgggacgggtgta
catgacagaggtcctgacgaacatactcaaattccaaatggaaatgcaagaactattaaa
aaatatgtcaaaaggccgaatggcaccccacggacaagccctaaattaaccaaacaattt
tccacgaatcgtataacaccccttcctgtgtatgataaccaagacgatagtatgaatgat
cttatatttgatgtagaggatggaaggggtcataaaacacaatcacagacaagtaggtcc
acaatttccgatttatatggttctgtgatgagtactagaaaaagtgccgattttgtggac
agtgatttgatgattgtgaaaacaaacgacaagtatgtgaatagcgtgactacagttaaa
cctgggaataaacaagatacgaaacatactctggaagtggaaacttctcctgaacgtgtt
ggaagtgccgagtccaattcaaaatatgatcagtgggccgatgaaattattaagagtagt
cgagaaccttctccgaatccttccccaagtaaaagtgatgttataaatggctcacctggc
aaatcagggaagcataaaagtaagaaaaaaaagaaagaaaagagatatttgactggcaaa
gagagggataaagaagttaaatcaagtagagacagggagagaagtaagagtagtgaaaga
aaggagcacaaaatgaaggggagcaagactccaacgtcagacgaactgttgctaggagac
tcagatgtaaatgaaagttccctttga
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