KEGG   Mya arenaria (softshell): 128218390
Entry
128218390         CDS       T09995                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
maea  Mya arenaria (softshell)
Pathway
maea03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128218390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128218390
   03036 Chromosome and associated proteins [BR:maea03036]
    128218390
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     128218390
Chromosome and associated proteins [BR:maea03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     128218390
    COMPASS/SET1 complex (yeast)
     128218390
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_NOL10_N PQQ_2
Other DBs
NCBI-GeneID: 128218390
NCBI-ProteinID: XP_052782010
LinkDB
Position
14:45800659..45812456
AA seq 318 aa
MFIDEMKLTENVVRNFRVAKIFRENTDKITSIDFSSNGETLISSSDDDSIVIYDCQGGTP
KRTLNSKKYGVDLIRYTHAVNTALHSSTKIDDTIRYLSLHDNKYIRYFPGHTKKVVCLNM
SPINDTFLSGSLDKTIRLWDLRSQNCQGMMHLPGRPVATFDPEGLIFAAGINSECVKLYD
LRSFDRGPFATFKLPQDKDCDWTGMKFSPDGKFIVVSTNGQVIRLIDAFQGTPLQTFVGH
TNTKGIPLEVSFSPDSLFVFSGSTDGRVHCWSTDTGAKVATMSCDHPGAVQCVGFNPKFM
MLATACTNMAFWLPYIDE
NT seq 957 nt   +upstreamnt  +downstreamnt
atgttcatcgacgaaatgaaactgactgaaaatgttgtacgaaattttagagttgccaaa
atatttcgagaaaatactgataagatcacaagtatagacttttcctcaaatggagagact
ctgatatcaagcagtgatgacgactcgatcgtaatatacgactgtcaaggagggacgcca
aaaagaacattgaacagtaaaaagtatggagttgatcttataagatacacacatgcagtc
aatactgccctacacagttcaacaaaaattgatgacaccatccgatacctatcgctgcat
gataacaagtacatcaggtattttccgggacatacaaaaaaggtggtatgtttgaacatg
tctccaataaatgacactttcttgtcgggatccctggacaagacaatacggctgtgggat
ttacgctcgcagaattgtcagggcatgatgcaccttccaggcaggccggtcgccaccttt
gatccagagggactcatatttgcagcaggcatcaactccgagtgtgtcaaactctacgat
cttaggtcctttgataggggtccgtttgcaacgttcaagcttccccaggacaaggattgt
gactggactgggatgaagtttagtccagacgggaagtttattgtcgtttccacgaatggc
caggttatcagacttattgatgcctttcagggaactccactacagacatttgtgggccac
acaaacactaaagggatcccactggaggtatccttcagcccggactcgctgtttgtgttc
agtgggtcgacagacgggcgtgtgcactgctggagcacagacactggggccaaggtggcc
accatgagctgcgaccatcccggtgctgtacagtgcgtaggcttcaaccccaagtttatg
atgttggccactgcttgtacaaacatggctttctggttaccgtacatagacgaatga

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