Mya arenaria (softshell): 128218422
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Entry
128218422 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128218422 isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
maea
Mya arenaria (softshell)
Pathway
maea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128218422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128218422
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128218422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
ABC_tran
AAA_28
NPHP3_N
AAA_25
nSTAND3
RNA_helicase
AAA_18
Vps4_C
AAA_17
Mg_chelatase
AAA_33
Rad17
ATPase
IstB_IS21
nSTAND_NTPase5
TsaE
NACHT
Viral_helicase1
NB-ARC
AAA_7
Parvo_NS1
Zeta_toxin
DUF815
Motif
Other DBs
NCBI-GeneID:
128218422
NCBI-ProteinID:
XP_052782049
LinkDB
All DBs
Position
2:complement(56723933..56749344)
Genome browser
AA seq
1435 aa
AA seq
DB search
MYLLEERSDCLTYRRHEEFAFRHVVKLGQNDLIFILKSNMAKKKKVRPAQNPSKNLQNNK
VAVVPNTSEENKEKIESHDSGKTEKSITIYQKKEIDTCHSFKDAVVKEQELKPSTNKIKA
NIEKPAYANGVEPDESYDDVFKVPLPPQPQTSGLQEESTGKKSTKKKKKPRSKQDLDDQM
ETSHRLYKKRIKDPKLIHRIVAYLDTVPNKNFISIPSMAEYLQNRYHDYSRKKKGPFREY
VDKAYAVWEKNGGKAKNNRAEKHKGKKGTVPNDLRLEPDDEALEFADSDSDGDIQYDSSQ
GDDDVEVDETQQDDEEMNPGTNAVNNMMSNLYKNSPHHLYKSKEESESRGLKRKHGKEDH
GNKGHVKPEFALLDDEVEELEDKMDEDEEDSLYNEITSKILYPSPNALHRNLSSTGLVGP
RRTQFDKYFLDRKGDSPKKGENSQPISRDTNIKKFLGALPSRTSYSAYVNSKSDPRTKSG
TLYRVQLDDNITEDPSRIHSGISDENQGISGTPPQSPDPTVEVMDTSTVQDIPDPRLTSH
TTVGPGTGPGGDNRLVVVDQSARDRKGSKTPKPSRRSSKRVRRNNGGGSDTEPDGKQEKP
DKGLEVQKSTVTFADVGGNEKCLTEICKLLVHMRHPEVYQQLGVTPPRGFLLHGPPGCGK
TLLANAIAGELDLPLIKLAATEIVSGVSGDSEEKIRDLFEKAQQTAPCVIFIDEIDAITP
KRETASKDMERRIVAQLLACMDDLNANVSCHVLVIGATNRADSLDPALRRAGRFDREIAL
GIPDEEARLRILQVLCRGLRLHEDFAFQPLAHSTPGYVGADLMALTREAAISAVNRVFQM
LQKDKINVTENITNATDDNTNITEDITNITDASPPAEVFVTNNSPSGADSVPAAHVDASC
GGKQIAIDANLTSMKFAKAVSGYALVSVKEAPVGSSLEVSDKTENNSHSDKENEPAIDKP
DMETLNECSIKSFTENMETSDTHEVPADVEAIKDKKSVTDKILLNPVLTNVNGQKFGSCE
NKSSDSSILPCTEGEPKVSGGTDNDTLVSKAVAGSIVDTDMEVDNGEVVGDSVNTPADMV
NTSIVITSNRTVDKVLVNVGKDYLSALSWLKDTPPLTEDQLKDLYITMADFQEALKCVQP
SAKREGFATVPDVTWDDIGALKDVREELQLAILAPVQHPEQFRSLGLNRAQGVLLAGPPG
CGKTLLAKAIANETGINFISVKGPELLNMYVGESERAVRTVFQRARNSSPCVIFFDELDA
LCPKRSGHSEGNSSARVVNQLLTEMDGLEERRQVFIMAATNRPDIIDPAVLRPGRLDKTL
YVGLPTEADRLDILTCITKNGTRPTLDPDVELAVLSGDSRCQCLTGADLAALVREASVFA
LKAAILKHGAQPSDTILVNKQHFELAFRKIRPSVSAKDLERYRSMGHSLSTGPAE
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcttgaagaacgatcagattgcttgacttataggcggcatgaggaatttgct
tttagacatgttgtaaaactgggacagaatgatttgattttcatactaaaatcaaacatg
gcaaaaaagaaaaaggttcgtcctgcacaaaaccccagcaaaaacctgcagaataataaa
gtggctgtagtacccaacacttctgaagagaacaaagagaaaattgagtcccatgattca
ggcaaaactgaaaaatctatcacaatctatcaaaagaaagaaatcgacacatgtcattcc
tttaaagatgctgttgttaaagagcaagaacttaagcccagtacaaataaaatcaaagct
aacattgagaagccagcttatgcaaatggcgtggaaccagacgagtcatacgatgatgtg
ttcaaagtccccctacctccccagccccagacatcgggcttgcaggaagagtcaactggg
aagaaatcaaccaagaagaaaaaaaagccccgttccaaacaggatttggacgatcagatg
gaaacatcacacaggctgtacaagaaacggatcaaggaccctaaactcattcatagaata
gtagcttatttagatactgtccctaacaaaaacttcataagcataccctcaatggctgag
tacctccagaaccgataccatgactactccagaaagaaaaagggtcccttccgagagtat
gttgacaaagcgtatgctgtgtgggagaaaaacggaggcaaggccaaaaataaccgggca
gaaaaacataaggggaagaaaggaactgtccccaacgacctgagacttgagcctgatgat
gaagccctggagttcgctgactctgactctgatggggacatccagtatgactcctcacag
ggagatgacgatgtggaggtagatgagacccaacaagatgacgaagaaatgaacccgggc
acaaatgctgtcaacaacatgatgtcaaatctgtataagaacagtccacaccatttatat
aagagtaaggaagagtcagaaagtagaggtctgaagagaaaacacggaaaggaagatcat
ggaaacaagggccatgtaaaacctgagtttgctttactagatgatgaagtagaagaactt
gaagataagatggatgaagatgaagaagattcattgtataatgaaataacatcaaaaatc
ttgtatcccagcccgaatgcactgcatcgaaacttaagctctactggtttggtagggcca
cgcagaactcaatttgataaatacttcttagataggaaaggagattcaccgaagaaaggg
gaaaactcacaacctatttccagagatacaaatatcaagaagtttttaggggcacttcct
tccagaacctcttacagtgcttatgtaaacagcaaatctgacccacggacaaaatctggg
acgttgtatcgtgtgcaactagatgacaacataacagaggatccgagcaggatacacagt
ggtatctctgatgagaatcaaggtatatctggtacgcctccccagtccccagacccaaca
gtggaagtaatggacacttcaactgttcaggacatcccagaccccagactgacctcacac
accactgtaggaccagggactggcccagggggggacaacagactggtggttgttgaccag
tctgcaagggatagaaaagggtcaaagacaccaaagccatccaggaggagcagcaagagg
gtgcgcagaaataacgggggaggcagtgacacagagcctgatggcaagcaggagaaacct
gacaaaggtctagaagtgcagaagtcaactgtaacctttgctgatgttggaggcaatgag
aaatgtctaacggagatctgtaagttgctggtacacatgcgtcatccagaggtttatcag
cagctgggcgtgaccccaccccgaggatttcttctacatggtccccctggctgtggcaag
actctactcgccaatgccattgctggggagttggaccttcctttgataaagcttgctgcc
acagagatcgtgtctggtgtgtccggtgattctgaggagaagataagagacctctttgag
aaagctcagcaaacagctccatgtgtgattttcatcgatgagattgatgcaataacaccg
aaacgtgagacagcctccaaggatatggaaagacgaattgtggcgcagcttctcgcctgc
atggatgacctgaatgccaatgttagctgtcatgtgctggtgatcggagcgactaatcgg
gcagactccctggacccggcgttacggcgggcgggccggtttgatcgagaaattgctttg
ggaatccctgatgaggaggcaagactcaggattctgcaggtgttgtgtcggggtctaagg
ctgcatgaggactttgcattccaacccctcgcccactcaaccccaggttatgttggggca
gatttgatggctctaactcgcgaggcggccatctctgctgtaaacagggttttccagatg
ctccaaaaagataaaatcaatgttacagagaatataaccaatgcaacagatgataatacc
aatataacagaagacatcaccaatataacagatgcatctcctcctgctgaagtgtttgtt
acaaataattcaccttctggtgctgacagtgtccctgctgcacatgttgatgcttcctgt
ggtggtaaacaaatagcaatagatgcaaaccttaccagcatgaagtttgctaaagcagta
agtggatatgcattagtaagcgttaaagaagctcctgtaggttcttctttagaggttagt
gacaaaactgaaaacaacagtcattctgataaggaaaatgagcctgctattgataaacct
gacatggagacattaaatgaatgttcaataaaaagttttactgaaaacatggaaaccagt
gatacacatgaagtgccagctgatgtagaagcaattaaagataaaaagagtgtaactgat
aaaattcttttgaaccctgttttgacaaatgtgaatggtcagaaatttggatcttgtgaa
aataaaagtagtgattcctcaattttaccatgtacagaaggtgagcccaaagtatcaggt
ggaactgacaatgatacattagtaagtaaagctgtagcaggtagtatagttgacactgat
atggaagttgacaatggagaagttgtgggtgacagtgtaaacactccagctgacatggtt
aataccagcattgtgattacatccaacaggactgtggacaaagtgctggtcaatgtaggc
aaagactatctttcagctctgtcatggctgaaggacacgcccccactgacagaggaccag
ctaaaggatctgtacatcaccatggcagacttccaggaagcattgaagtgtgtgcagccg
tcagccaagcgtgagggttttgcaactgtgcctgatgtcacatgggacgacattggtgct
ctcaaggatgtacgggaagaacttcagctagctatactggcacctgtgcagcacccggag
cagttcaggagtttgggcctaaacagagcccaaggtgtcctccttgcggggcctccgggc
tgcgggaaaacactcctggctaaggcaattgcaaatgaaacggggatcaacttcatctca
gtgaagggcccagagcttcttaatatgtacgttggagagagtgagagagcagtgagaact
gttttccagagggcccgcaactcctctccatgtgtgatattcttcgatgagttagatgcc
ctttgtccaaaacgttctggccactctgagggcaactcaagtgcgcgtgtagtgaatcag
ctgttgactgaaatggacggtctggaggagcgacgtcaggtcttcattatggccgccaca
aacaggcctgatatcatagacccggcagtgttacgtcctgggagactggacaagacactg
tatgtgggcctcccaaccgaggcggaccgtctggacattctcacctgtatcaccaagaat
gggacacggcctaccctggatccggatgtcgaactagctgtactctcgggtgactctcgc
tgtcaatgcttgacaggggctgatctggctgcgttggtccgtgaggcctcagtgtttgcc
ctgaaggctgccatcttgaaacatggggcacaacccagtgacaccatcctggttaataag
caacactttgagttagccttccgtaaaataaggccatcagtatcagcaaaggacctggag
cggtacagatcaatgggtcactctctttctactgggcctgctgagtag
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