Mya arenaria (softshell): 128218804
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Entry
128218804 CDS
T09995
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
maea04990
]
128218804
Domain-containing proteins not elsewhere classified [BR:
maea04990
]
Other domain-containing proteins
Patched domain-containing proteins
128218804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
NPC1_MLD
ACR_tran
Motif
Other DBs
NCBI-GeneID:
128218804
NCBI-ProteinID:
XP_052782467
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All DBs
Position
15:complement(18946059..18959398)
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AA seq
895 aa
AA seq
DB search
MPQVNFLYEFVEGKFGSLFARYGRFVARHPWHVLIIAVVVNLALGIGMVRFRIDIDAEHV
YLPQDSQSKKDQHLIESTFPDLTGRNYNPLYDVYFDSLWARVIVRAKSGNLLSRTSLEAV
KDFNTFLQTMNATADDGTIVTFNDICARAYGICAVDGSIFWNNEFLAAVDAGNVTFPVFV
SSIVGNVYYALNVDKSATTDANGFLKQMKYIHLNYELRKDTSDDYIKKWMDAFVDHMEAY
NSDKLDIAYGHHTSIDEELDRNVTGDIKWFAVTILLMVLYACLATLSIRDVVSQRAMLGL
AGISAAALAIFASFGFCSAIGLEFVSIVGTVPFLIIGIGIDDMFLLLSALAGAQGEATVE
DKMATTLQTSCVSITISSLTDLIAFMSGAGSSFIAVRNFCVYTGVAVVFCYLNNITIVTA
ALTLNERRVDANRHFFTCRRVKTEQSLEVERKSRSYIICCSGSPPSNREEAESLLDKFPR
WLFPKIVLKLPFKIVIILLFLGYLAAGIYGCVHLKQGLEFTQLVQEDSYFYKYSDLLQTK
FKRQYPISFLTTQTYKYTDPNTTALIDGILSTAKANDYFDDSFESNWLKVYMASAYYDGT
SELNFINGFKSFITNPKFTRYENDIVIDSSGTKITASRYYVLSRVLSDSQEEGKMMLKAR
EIAKNAQMNCLAFSPYFDVFEQYVSVLGQTLQSVGIALAAVFVVTCLLMPHPVLIIFVTV
AVTMIMVGVFGYMLYVDIALSAITMVQLIMCIGFSIDFTAHICHGYIVAPGADKNLRVEQ
AIDEVGAPIFHGAFSSLCGVVILFAATSYIFKTFATIMCFVLLFGIAHALLLLPVVLSWI
GPGHLKLKREVTPQNSQRNRNTFDHGVRNEGAVMDDEASETSPNEIKLRNNERRQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagtaaacttcctttacgagtttgttgagggaaagtttggctcgctgtttgcc
cggtatggtcgttttgttgcccggcacccttggcatgtccttattattgctgttgtggtg
aacctcgctcttggaataggcatggtcagatttcgaatcgacattgacgcagagcacgtc
tatctaccccaagattctcagtcaaagaaagaccagcacttaatcgagagtacatttcct
gatctaaccggaagaaactacaacccactgtatgacgtttatttcgacagcctctgggct
cgcgtaattgttcgggcaaaatcagggaaccttctttctagaacgtctcttgaagcagtc
aaagactttaacacctttttacaaacaatgaatgctacagccgacgatggaaccattgtc
acgttcaatgacatatgtgcccgtgcatatggtatctgtgccgtggatggctcaattttc
tggaacaacgaattcctcgctgccgtcgatgctggcaatgtgacgtttccggtctttgtt
tcatccatagtcggaaacgtctactacgctttaaatgtagacaagtctgcaaccacggat
gccaatggattcttgaagcaaatgaagtacatacatctaaactatgagcttcgtaaagac
acttctgacgattacataaagaaatggatggatgcttttgttgatcacatggaggcgtac
aactccgataaactggacattgcctatggtcatcacacttcaattgatgaagaattagac
agaaatgtaactggtgatatcaaatggtttgctgttaccattcttcttatggtcctatat
gcctgtcttgcaacgttatctataagggacgtagtgagtcaacgagctatgctggggttg
gctggtatatctgcagcggctcttgctatttttgccagttttgggttctgttcagcaatc
ggattggagtttgtcagtattgttgggacggtcccttttcttattatcgggattggtatt
gacgacatgtttttgttgttatcggctctggcgggagcgcaaggagaagcaactgttgaa
gacaaaatggcgacaacactgcagacctcgtgtgtcagtatcacaatttcatccctcaca
gaccttattgcctttatgtctggtgcagggtccagctttatagctgtcaggaatttttgt
gtctatactggtgtcgcggttgtgttctgctacttaaacaacatcaccattgtcaccgcg
gctcttacactcaacgaaagacgtgttgatgcaaaccggcatttctttacgtgtaggcgc
gttaaaacagaacaaagcctagaggtcgaaagaaaatcaagatcctacatcatttgctgt
agtggttccccacccagtaatcgtgaagaggcagaaagtctacttgacaaatttccgagg
tggttgtttccaaagattgtgctaaaattaccgtttaaaatcgttattattttgctattt
cttggatatctggcagcaggaatttacggatgtgtccatctaaaacaaggactcgaattt
acccaattggttcaggaagattcgtatttctataaatattcggatttactccaaacaaag
tttaaacgtcaatatccaatatcgtttttgacaacgcaaacatataaatacactgatccg
aatacaacggcactaatagatggtattttaagcacagccaaagcgaatgactattttgac
gattcatttgaatccaactggcttaaagtttacatggcaagtgcgtattatgatggaact
agcgaattgaatttcataaacggtttcaaaagctttattaccaaccccaagtttactcga
tatgaaaacgacattgtgattgactctagcggaacgaaaataactgcgtcaaggtattat
gtgctatcaagggttctttcggacagtcaagaagaaggaaaaatgatgctaaaggcgcga
gaaatagccaaaaatgctcagatgaactgtctagcattctccccatactttgatgttttt
gaacagtatgtaagtgttcttggccagactctacaatcagtgggtatagcattagctgca
gtgtttgttgtgacatgtttacttatgcctcatccagtcctgattatatttgtaaccgtt
gctgtaacaatgataatggtcggggtgttcggttatatgctttatgttgatatagcactt
agcgccatcactatggtacagctaatcatgtgtattggtttctctatagacttcacagca
catatatgtcacggttatatagtagctccaggagctgacaaaaatcttagagtggaacaa
gcaatagacgaagtcggtgcgccaatattccatggggcattttcatcattatgtggagta
gttatactttttgccgccacatcctatatatttaaaacgttcgcaacaattatgtgtttc
gttctcctttttggaatcgcacatgcacttttgttacttccggtagtgttgtcttggata
gggcctggtcatctaaaactaaaacgtgaggtaacgccgcaaaactctcaacggaatagg
aatacattcgatcacggtgtaaggaacgagggcgctgtcatggatgacgaagcaagtgaa
acatcacctaacgagatcaagcttcgcaacaatgaaagacgacaatga
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