Mya arenaria (softshell): 128219073
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Entry
128219073 CDS
T09995
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03030
DNA replication
maea03410
Base excision repair
maea03420
Nucleotide excision repair
maea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128219073
03410 Base excision repair
128219073
03420 Nucleotide excision repair
128219073
03430 Mismatch repair
128219073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128219073
03036 Chromosome and associated proteins [BR:
maea03036
]
128219073
03400 DNA repair and recombination proteins [BR:
maea03400
]
128219073
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128219073
DNA Replication Termination Factors
ELG1-RFC complex
128219073
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128219073
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128219073
Check point factors
HRAD17(Rad24)-RFC complex
128219073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_assoc_2
DNAX_ATPase_lid
AAA_24
AAA_22
AAA_30
AAA_11
Mg_chelatase
SLFN-g3_helicase
DUF815
Gp44_lid
RuvB_N
ResIII
AAA_5
AAA_7
Kinesin
AAA_19
MCM
Cdc6_lid
bpMoxR
AAA_3
Motif
Other DBs
NCBI-GeneID:
128219073
NCBI-ProteinID:
XP_052782852
LinkDB
All DBs
Position
15:45530103..45547966
Genome browser
AA seq
361 aa
AA seq
DB search
MHAFLKTGTIGPGNKEKTDQPAGTSKDSKKKTKHVPWVEKYRPRTMDDVAYQDEVVAVLK
KSLQGSDLPNLLFYGPPGTGKTSTILAASRDLFGDIYKTRVLELNASDERGISVVREKVK
NFSQQSASAVRPDGKPCPPFKIIILDEADSMTNAAQSALRRTMEKQSKSTRFCLICNYVS
RIIEPIASRCAKFRFKPLAEEILTKRLRHICEEEKIACEDEALTALLNTSEGDLRKAITF
LQSAGRLKSEATITQADIYEIAGVIPDDVIDGLITVCHSNSYEKLQSCVQDLMNEGHAAS
QLILQLHDKLVEMDSLGDKQKSLVLDKLAVVDKCLMDGADEFLQLMALCSVLMKQICQPD
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccttcctgaagacaggaaccattggtccgggcaacaaggagaaaacagatcag
ccggcaggcacatcgaaagactccaaaaagaagaccaaacatgtaccatgggtggaaaaa
tatcgaccaaggacgatggatgatgtggcttaccaggatgaagttgtggctgttctgaag
aagtctttgcagggatcagatcttcccaacttgctgttctatggtccccctggtacgggg
aaaacttctaccatcctggcagcatccagggatctgtttggagatatatacaagacaagg
gtgctggagctcaacgcctctgacgagcgaggaatcagtgtggtacgagagaaggtgaaa
aacttctcccaacaatccgccagcgctgtcagaccagatggtaaaccctgtccaccgttc
aagataatcatccttgatgaggctgactccatgacaaatgcagcacagtcagccttaaga
agaaccatggaaaaacaatccaagtccacacgcttctgtctgatctgcaactacgtcagt
cgtataatagaacccattgcttctcggtgtgctaagtttcgcttcaagccactcgctgag
gaaatcttgacgaaaagactgcggcatatctgtgaggaggaaaaaatagcttgtgaagat
gaggcactgacagcgctgctgaacacatcggaaggtgacttgcggaaagccatcacattt
ctacagagtgctgggaggctgaagtcagaggctacaatcacacaggcagacatatatgag
atcgctggggttataccagatgacgttatagacggtctcatcactgtttgtcattccaac
tcttacgagaaacttcagtcctgtgtacaggacctgatgaatgaaggccacgctgcgtcc
cagttgatactccagctgcatgataaactggtggagatggactcgctaggggacaaacag
aagtctcttgtcctcgacaaactcgcagttgttgacaaatgtttgatggatggagcagat
gagttcctccagctgatggccctgtgttcagtgcttatgaagcagatttgtcagcctgat
cagtga
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