Mya arenaria (softshell): 128219939
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Entry
128219939 CDS
T09995
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03420
Nucleotide excision repair
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128219939
09124 Replication and repair
03420 Nucleotide excision repair
128219939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128219939
03400 DNA repair and recombination proteins [BR:
maea03400
]
128219939
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128219939
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
128219939
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128219939
TCR (transcription coupled repair) factors
Cul4-CSA complex
128219939
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128219939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Nnf1
OSCP
Motif
Other DBs
NCBI-GeneID:
128219939
NCBI-ProteinID:
XP_052784086
LinkDB
All DBs
Position
15:complement(52168248..52191898)
Genome browser
AA seq
805 aa
AA seq
DB search
MPLSNANKRVLHEQQRKEDGKVSKKRRLSDADSQQNKKSKPNPEDVMTDSQKRANFSAIP
SPGSNGVHRHAAPLGTSKPGTTKKLVIKNFKEKPKLPENYQQEAWGKLREAVEAIHTRRA
IRSSLEELYQAVENMCSYKMSSMLYEQLKQVCESHVKCNISKFLEENVGYEEFLKKIDNC
WQAHCQQMIMIRSIFLFLDRTYVLQNSAILSIWDMGLDLFRTHIVGHRIVQNRTVEGLLQ
LIERERTGEAVDRGRLKSLLRMLSDLQIYVDAFEKRFLEATDDLYRAEGQRLMEERDVPE
YLHHVEKRLEEENERLLHYLDQSTKKPVISLVEKQLLEQHISQMLQKGLNQLLSENRISD
LTRIFNLLSRVKNGQKELCAATALYIKNTGRMIVLNTNNDPDKDRDMVQTMLDFKDKIDN
VISTCFAKHEQFMNAMRESFESFINARQNKPAEYIAKYVDNKLRAGNKEATEEELERLLD
KIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGSAFTVKLEGM
FKDMELSKDIMLAFKQSIQAEKTPTGLELTVNILTMGHWPTYTPMEVHLPPEMVKLQEVF
KKFYLGKHSGRKLQWQPTLGHCVLKAGFTGGKKELQVSLFQTLCLLLFNEGDLFSLEEIK
QATAIEDSELRRTLQSLACGKAKVLLKAPKGKDVEDGDKFKFNDDFKHKLYRIKINQIQM
KETQEENVSTTERVFQDRQYQVDAAIVRIMKTRKALTHNLLISELYNQLKFPVKPADLKK
RIESLIDRDYMERDKDNPNSYNYVA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcaaatgcaaataagcgtgttctgcatgaacagcaacgtaaagaggacgga
aaggtttctaaaaagaggcgactgagcgacgcagattctcaacaaaataaaaaatctaaa
cctaacccagaggacgttatgacagactctcagaaacgtgctaatttctcagctattcca
agccctgggagtaatggggttcacaggcatgcagctccccttggaactagcaaaccaggg
acaacaaagaaactagttatcaaaaattttaaagagaagccaaaattaccagagaattat
cagcaggaagcatggggcaagctacgggaagcagtggaagctattcacacgaggagagca
atacgctcaagtctcgaagaactgtatcaggctgtggaaaatatgtgctcatacaagatg
tcatcaatgttatacgaacagttgaaacaagtctgtgaatcacatgtgaagtgcaacatc
tcaaagttcttggaagaaaacgtaggttatgaggagttcctgaagaaaatagataattgt
tggcaagcccattgtcaacagatgataatgatcagaagtatattccttttcctagataga
acatatgttttgcagaattctgcaatattgtctatatgggatatgggcctagacttgttt
cgcacacacatcgtaggacaccgaattgtgcagaatcgaacagtagaagggctgttacag
ttgattgagcgcgagagaactggtgaggcagttgataggggccgtctcaaaagtcttctg
cgtatgctgtctgatcttcagatctatgtggacgcatttgagaagcgcttcctggaggca
acagatgacctttaccgggcagaggggcagcgacttatggaggagagagatgtgcctgaa
tacctccatcatgtggaaaagagactggaagaggagaatgagcgcctgctgcattaccta
gaccagtctacaaagaaacctgtgatatcattggtggagaagcagctgttggaacagcac
atttcacagatgcttcagaaaggattaaaccagttgctatcagaaaaccggatctctgac
ttaacacgaatatttaacctgttgtctcgtgtaaaaaacggccagaaagaattatgtgct
gctactgcactatatatcaaaaacactggtcgtatgatagttctgaacaccaacaatgat
cctgacaaggatagagacatggtccagacaatgctggatttcaaagacaagatagacaat
gtaattagcacatgttttgcaaagcatgaacagtttatgaatgccatgagggagagtttt
gagagcttcattaacgccagacaaaacaaacctgcagagtacatagcaaaatatgtggac
aacaagctgcgagcgggaaacaaggaggcaacagaagaagagttggagagactgttggac
aaaatcatggtcctgttcagattcatacatggtaaagatgtgtttgaggcgttttacaag
aaggaccttgccaagcgattgttggtgggcaagtcagcctcagtggatgcagaaaagtcc
atgctctctaaacttaaacaagaatgtggcagtgctttcacagtgaagctggaaggaatg
ttcaaagacatggagctgtccaaagatatcatgctggctttcaaacagtcaatccaagca
gagaagactcccacaggtcttgaactgactgtgaacattttgacgatgggccattggcca
acatatacacccatggaggtccatctgccaccggagatggtgaaactacaggaggtgttt
aagaagttttaccttggcaagcacagcggccgtaaacttcaatggcagccaactctcggg
cattgtgtactgaaggctggcttcacagggggtaagaaagagctgcaggtgtccctattc
cagaccctgtgtctgctgctcttcaacgagggagatttgttttccctggaagagatcaaa
caagccactgccatagaggacagtgaattacggagaactctgcagtcacttgcctgtggg
aaggccaaggttcttctgaaggctcctaagggaaaggatgtagaagatggtgacaagttc
aagttcaatgatgacttcaagcacaagctgtaccgtatcaagatcaatcagatccagatg
aaagaaacgcaagaggaaaacgtgagcaccacggagcgtgtgttccaagatcggcagtac
caggtggatgcggccattgtacgcatcatgaagacgcggaaagcactcacacacaatctt
cttatctccgagctctataaccagctcaaatttcccgtcaaacctgcagacctgaagaag
cgaattgagagccttatagatcgggattacatggagcgcgacaaggataatccgaactcc
tacaactacgtcgcatag
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