KEGG   Mya arenaria (softshell): 128219948
Entry
128219948         CDS       T09995                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
maea  Mya arenaria (softshell)
Pathway
maea03013  Nucleocytoplasmic transport
maea03015  mRNA surveillance pathway
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128219948
  09122 Translation
   03013 Nucleocytoplasmic transport
    128219948
   03015 mRNA surveillance pathway
    128219948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128219948
   03041 Spliceosome [BR:maea03041]
    128219948
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     128219948
Spliceosome [BR:maea03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    128219948
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 128219948
NCBI-ProteinID: XP_052784106
LinkDB
Position
15:complement(46992082..46998680)
AA seq 159 aa
MSLLKPALGSADISAYRDQHFKGSRTEQERLLLESSTLYVGNLSFYTTEEQIHELFSRCG
DIKRIVMGLDKIRKTPCGFCFVEYYTRTDAEMAIRYVNGTRLDDRIVRTDWDVGFKEGRQ
YGRGKSGGQVRDEYRSDYDEGRGGYGKIVANKIRPRESL
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtctcttttaaagcctgcactagggtctgcggatattagcgcctacagagatcagcat
ttcaagggaagtcgtacagagcaggagagactccttcttgagagcagcaccttatatgta
ggcaatctctccttctacaccacagaagaacagatacatgaactctttagccgatgtggg
gatataaagcgcattgtcatgggcttggacaaaatcagaaagaccccatgtggattctgt
tttgttgaatattacacaagaacagatgcggagatggccatacgatacgtcaatggtacc
cgacttgatgacagaatcgtgagaacagactgggatgttggtttcaaagagggaaggcag
tatggtcgtgggaaatctggaggacaggttcgagacgagtacagatcagactatgatgag
ggaagaggcgggtacgggaaaattgtcgccaacaaaatacgaccccgggagtcattgtga

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