Mya arenaria (softshell): 128220317
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Entry
128220317 CDS
T09995
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
maea
Mya arenaria (softshell)
Pathway
maea04136
Autophagy - other
maea04140
Autophagy - animal
maea04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128220317
04140 Autophagy - animal
128220317
04136 Autophagy - other
128220317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128220317
03029 Mitochondrial biogenesis [BR:
maea03029
]
128220317
Membrane trafficking [BR:
maea04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
128220317
Others
Specific organelles associated proteins
Auto phagosome
128220317
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128220317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
ATG16
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_Aladin
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR75_1st
ASA1
Beta-prop_WDR19_1st
Tricorn_2nd
eIF2A
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_NWD2_C
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_DCAF4
PAC11
CLIP1
KASH_CCD
CCDC89
Beta-prop_NUP159_NUP214
bHLH_IRO3
DUF7260
Fez1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
128220317
NCBI-ProteinID:
XP_052784636
LinkDB
All DBs
Position
15:37802237..37821736
Genome browser
AA seq
551 aa
AA seq
DB search
MAKSTDWKKNISQSLKLRNKKERHEFADLIESQNKLFEQVASLKTRNMQLTIETERLKSD
NLSLQIRADSGGGGGGPGGSEKVALLEQRLWKLSEELTEMHRRRGENAQQIIDLTAAMKE
KEKELQTKDAKLMDALAVENSLRAEMKHLERTITELEATNQTLKDEHQALQMAFTSLEEK
FRKLQSDNDELMARWLQQKMEQAEVLNRENDNFIKHRQLLLQKELAEAAKENVNVPEGDE
NIRGIPQICLSASIPTKAQCKLDAHDGEVNAVLWSPTGSMFATGGSDRKIKLWDYNAGQC
SCKGMLTGSNAGITSLEYDLDESHILGASNDYACRLWSIADQRLRHTLTGHSGKVLSAKF
LGENSKVVSGSHDRTLKIWDLHTKACIKTIFAGSSCNDLVTLHGTHIISGHFDKRVRFWD
TKSDNTSNEIGLHGRITSLALSPDRTSLLVCTREDTLKVIDLRQNQVIYTLCDDNFKVGY
DWSRAVFSPDGTYACAGSSDGTLFIWNIARGKVEKTLKEHTHSILACSWHPAGSYILSSE
KQKKVVLWSDI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcgactgattggaagaaaaatatatcacagagtttgaaattacgaaataaa
aaagagcgacatgaattcgcagatttaattgaatcacaaaataagttgtttgagcaagtg
gcctctctcaagaccaggaatatgcagctcaccattgagacagagagactcaagtcagac
aatctcagcttgcagatacgagcagacagtggtggaggaggagggggccctggtggcagt
gagaaagtggcactcctggagcagagactctggaaactaagcgaggagctgacagagatg
cacaggcgaagaggggagaatgctcaacaaatcatagacctaactgctgccatgaaagaa
aaagagaaagaacttcaaacaaaagatgccaagctgatggatgctttggctgtagagaac
agtctacgagcagagatgaaacatttggagagaaccattacagagttggaggctacaaac
cagacccttaaagatgaacaccaggcactacaaatggcgtttacatcccttgaggagaaa
tttcgcaaactccagagtgacaatgatgaacttatggcgcgatggcttcaacaaaagatg
gaacaggccgaagttttaaatcgtgaaaatgacaactttataaaacacagacaattactt
ctacaaaaggaattggccgaggcagctaaagaaaatgtgaatgtccctgaaggagatgag
aacataagggggattccacagatctgccttagtgcttccatacctacaaaagctcaatgc
aaactggacgcccacgacggtgaagtaaacgccgtattgtggagtccaacaggcagcatg
tttgccaccggcggctccgaccgaaaaattaaactttgggactacaatgctggtcagtgt
tcatgtaaaggcatgttgacgggaagtaacgcaggtattactagtcttgaatatgacctt
gatgagagccatatactcggagcgtcaaacgattacgcgtgtaggctttggtcaattgca
gaccagagattgcggcacacattgacgggccatagtggaaaagttttgtcagcaaaattc
cttggagaaaatagcaaggttgtgtcaggcagccatgacaggacactcaaaatatgggac
ctccatactaaagcatgtattaaaaccatatttgccgggtcaagttgcaatgatttagtc
acgctacatgggacgcacataatcagcggccattttgacaagcgtgtacggttctgggac
acaaaatcagataacacgagcaacgagataggacttcatggcagaattacctcccttgct
ttgtcaccggaccgcacatcattattagtttgtacacgagaagacaccttaaaagtgata
gatttacgccaaaatcaagttatttatactctatgtgatgacaatttcaaagtgggctac
gactggtcacgtgcggtgttcagcccggatggcacgtatgcgtgtgcagggtccagtgac
gggacgctcttcatctggaacatcgcacgaggcaaggtggagaaaactcttaaggaacat
acgcactcaatcctggcctgttcctggcatccagctggctcgtacattctcagttccgag
aaacagaagaaagttgttctatggtcagacatctag
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