Entry |
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Name |
(RefSeq) THO complex subunit 4-A-like
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KO |
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Organism |
maea Mya arenaria (softshell)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:maea00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128220319
09122 Translation
03013 Nucleocytoplasmic transport
128220319
03015 mRNA surveillance pathway
128220319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:maea03019]
128220319
03041 Spliceosome [BR:maea03041]
128220319
Messenger RNA biogenesis [BR:maea03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128220319
TREX complex
128220319
Spliceosome [BR:maea03041]
Complex C
Other components
EJC/TREX
128220319
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128220319
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
2:58347908..58359276
|
AA seq |
281 aa
MGDKIDMSLDDIIKSNKKPGRGGGRGGRGAGGRGNRGRQSRGAGGGGRGVFRGGVQKRRQ
GGRGGNRSFGRTPPKGNTDDVWQHDMYDGSGAAAIKRLRSPGGGLQTGSGKLHISNLDFG
VSESDIQELFAEFGPLKKAAVHYDRSGRSLGTAEVIYERRSDAAKALKQYNNVPLDGRPM
SIQLIGASESILSGGSVGGGGGSQGQRFRGGGGRGGGSRRGDGASGGGQRRSNGFGSGRG
GRGGGRGRGRGGRGGGGDRKPLTAEELDAQLDAYNAKMETD |
NT seq |
846 nt +upstreamnt +downstreamnt
atgggagataaaattgatatgagccttgatgacattattaaatccaacaaaaaacctgga
cggggcggtggacgcggaggtcgaggggctgggggaaggggaaatagaggaagacaaagc
agaggcgccggtggtggtggacgcggagtattcagaggtggagttcagaaacgtcgacag
ggtggtcgaggaggcaatagatcatttgggcgcactcctccaaaaggaaatacagatgat
gtatggcaacatgacatgtatgatggaagtggagctgctgctataaagcgattgaggtct
ccaggcggaggactccagacaggctctggcaagctgcacatatccaatctagattttggt
gtcagtgaatctgacattcaggaactgtttgctgagtttggcccactgaagaaagctgct
gttcactatgacagatcaggacgatcactaggaactgcagaagtaatctatgaacgaaga
tcagatgctgccaaagctttaaaacagtacaataacgtccctcttgatgggcgtccaatg
agcatccagttgataggtgcaagtgagagcatcctaagtggtggaagtgttggtggcggt
ggtggtagtcagggccagcggttcagaggtggcggtgggcgcggtggcggcagtaggcgt
ggtgatggtgccagtggtggcggacagagacgatcaaacggctttggaagtggtcgaggt
gggcgtggtggaggacggggtcgcggacgaggaggacgtggcgggggtggtgaccgtaaa
cctctcactgcagaggaacttgatgctcagttagatgcttacaatgccaagatggaaact
gattga |