KEGG   Mya arenaria (softshell): 128220319
Entry
128220319         CDS       T09995                                 
Name
(RefSeq) THO complex subunit 4-A-like
  KO
K12881  THO complex subunit 4
Organism
maea  Mya arenaria (softshell)
Pathway
maea03013  Nucleocytoplasmic transport
maea03015  mRNA surveillance pathway
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128220319
  09122 Translation
   03013 Nucleocytoplasmic transport
    128220319
   03015 mRNA surveillance pathway
    128220319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128220319
   03041 Spliceosome [BR:maea03041]
    128220319
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     128220319
    TREX complex
     128220319
Spliceosome [BR:maea03041]
 Complex C
  Other components
   EJC/TREX
    128220319
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128220319
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_occluded Btz
Other DBs
NCBI-GeneID: 128220319
NCBI-ProteinID: XP_052784641
LinkDB
Position
2:58347908..58359276
AA seq 281 aa
MGDKIDMSLDDIIKSNKKPGRGGGRGGRGAGGRGNRGRQSRGAGGGGRGVFRGGVQKRRQ
GGRGGNRSFGRTPPKGNTDDVWQHDMYDGSGAAAIKRLRSPGGGLQTGSGKLHISNLDFG
VSESDIQELFAEFGPLKKAAVHYDRSGRSLGTAEVIYERRSDAAKALKQYNNVPLDGRPM
SIQLIGASESILSGGSVGGGGGSQGQRFRGGGGRGGGSRRGDGASGGGQRRSNGFGSGRG
GRGGGRGRGRGGRGGGGDRKPLTAEELDAQLDAYNAKMETD
NT seq 846 nt   +upstreamnt  +downstreamnt
atgggagataaaattgatatgagccttgatgacattattaaatccaacaaaaaacctgga
cggggcggtggacgcggaggtcgaggggctgggggaaggggaaatagaggaagacaaagc
agaggcgccggtggtggtggacgcggagtattcagaggtggagttcagaaacgtcgacag
ggtggtcgaggaggcaatagatcatttgggcgcactcctccaaaaggaaatacagatgat
gtatggcaacatgacatgtatgatggaagtggagctgctgctataaagcgattgaggtct
ccaggcggaggactccagacaggctctggcaagctgcacatatccaatctagattttggt
gtcagtgaatctgacattcaggaactgtttgctgagtttggcccactgaagaaagctgct
gttcactatgacagatcaggacgatcactaggaactgcagaagtaatctatgaacgaaga
tcagatgctgccaaagctttaaaacagtacaataacgtccctcttgatgggcgtccaatg
agcatccagttgataggtgcaagtgagagcatcctaagtggtggaagtgttggtggcggt
ggtggtagtcagggccagcggttcagaggtggcggtgggcgcggtggcggcagtaggcgt
ggtgatggtgccagtggtggcggacagagacgatcaaacggctttggaagtggtcgaggt
gggcgtggtggaggacggggtcgcggacgaggaggacgtggcgggggtggtgaccgtaaa
cctctcactgcagaggaacttgatgctcagttagatgcttacaatgccaagatggaaact
gattga

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