Mya arenaria (softshell): 128220392
Help
Entry
128220392 CDS
T09995
Name
(RefSeq) transcription factor Sox-3-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128220392
Transcription factors [BR:
maea03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128220392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128220392
NCBI-ProteinID:
XP_052784720
LinkDB
All DBs
Position
15:complement(55056903..55060517)
Genome browser
AA seq
346 aa
AA seq
DB search
MEYTEMEPDMQSLKNQGGPPQTALPATSQHHGMNGPVSHGLNNNHDEDDHSPGTSPGGGG
GVGGKGGSAADRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEQEKR
PFIDEAKRLRAIHMKVIAEHPDYKYRPRRKTKTLMKKDKYALPGMPHGGPGMQAMGQMGR
DPSGMYMNGYMPNGYPMITDPNAYQQMQHMGAAMQSQYGQYLPTQGMAGPQSMTSGSYMN
GASSYTMSMAPYGMPPQSHSTKRDSNTPTGHSGGGVPSQGGRPNGVPAGDLREMISMYLP
PGSDPNDPSAQQRLHQQMQAMQGHYQMAPPISSESVNSNTVPLTHM
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagtacaccgaaatggaaccggacatgcagtctctcaagaatcaaggagggccgcct
cagacggctcttccggccaccagtcagcaccatggtatgaacggccccgtctcacacggc
ctcaacaacaatcacgacgaggacgaccactcaccggggacttcccctggtggaggcggc
ggtgtaggaggaaagggcgggagtgccgccgacagagtcaagcgtccaatgaacgcattc
atggtgtggtcccgcggacagcgccgaaaaatggcacaggagaacccgaaaatgcacaac
tcggaaatcagcaagcgtctaggtgccgagtggaaactcctaacggaacaagaaaagcgt
cccttcatagatgaggcgaagaggttgcgggccattcacatgaaggtaatagcggaacac
cctgactacaaataccgcccccgccggaagaccaagactttgatgaagaaggacaagtac
gcgcttccggggatgccccatggcggccccgggatgcaggccatgggtcagatgggcagg
gacccctccggtatgtacatgaacggatacatgccaaatggctaccctatgatcacggac
ccgaatgcctaccagcagatgcagcacatgggagcggccatgcaatctcaatatggacag
tatttacccacccaggggatggccgggcctcagagcatgacttccggttcctacatgaac
ggcgcatcaagctacacaatgtccatggcaccttatgggatgccaccacagtctcactcc
acgaaacgtgactctaacactcccacaggacactcaggtggcggcgttccttcccagggg
ggtcgccccaacggggtgccggcaggagacttacgtgaaatgataagcatgtatttacca
cccggaagtgatcccaatgaccccagtgctcagcaaagacttcatcaacaaatgcaagcc
atgcagggacactatcagatggctcccccaatctcgtcagaatccgttaattccaatact
gtgccgcttacgcacatgtga
DBGET
integrated database retrieval system
