Mya arenaria (softshell): 128220648
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Entry
128220648 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128220648
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128220648
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128220648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_Vps41
PHD
RINGv
PHDvar_NSD
zf-RING_4
zf-C3H2C3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
128220648
NCBI-ProteinID:
XP_052785089
LinkDB
All DBs
Position
15:complement(7776286..7798392)
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AA seq
462 aa
AA seq
DB search
MSGPTLVAVILVVLGLAGQVLGDILVRKENETITYFDDMMSMFGPSISSKGVRGYVYVAS
PLDGCSAVQPPPIKNLSWIALIARDNCSFVEKVRKAQNANYSAAIVYNSYSDDDVLSMAG
DGSDIIIPSVFVGWTDGELLRTQYCFNCLNLEHKSGTYNLFIDNHEPQYYNPYVLWPFAA
VVGTCFILMIIFMVIKWCRDINRRRKSRLPKKQLKKIPTKKFKKGDEYDCCAICLDDYEE
GDKLRLLPCSHAYHTKCIDPWLTKNKRSCPICKRKVFPGDDPDTESDSSDDERPTERTPL
LGNSSEPSGQTNRRSTFDSSGLPPPTGVVRVNPGHTCSHDSDQSESEEGAAGGVRHLNLG
QENPLLSLGRAPVHEKRPANQKVGSEEKLTNENQAAPSSSTYQDKHETVVTVTNEGADNS
GFRNDDFSSEEEDGDFGNPGDADDVMYVGKGKVDEKKNNGVV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggccaacactggtggctgttatattggtggtccttggacttgccggccaagtg
ttaggtgatatccttgtgagaaaagaaaatgagaccattacttactttgatgatatgatg
tccatgtttggcccaagtattagcagtaaaggtgtaaggggttatgtgtatgtagcgagc
ccgctggatggatgtagcgcagtacaaccaccacccatcaagaaccttagctggatagca
cttattgcccgcgataactgcagctttgtggagaaagtgagaaaggctcagaacgccaat
tatagtgcggccatagtttacaacagctattccgacgatgatgtgctatcaatggcaggc
gatgggagcgacatcatcatcccatctgtgtttgtgggctggacagacggggagttgctg
aggacgcagtactgcttcaactgtttaaaccttgaacacaagtctggcacgtacaacctc
ttcattgacaaccatgagccccagtattataacccctacgtcctgtggccctttgcagct
gtcgtgggaacatgcttcatccttatgatcatatttatggttatcaagtggtgcagggac
attaaccgtagacgcaagtcacgactgccaaagaaacaactcaagaaaatacctacaaaa
aaattcaagaaaggtgatgagtatgactgttgtgctatctgcctggatgactatgaagaa
ggagataaactccgcctactgccctgcagtcatgcttaccacacaaagtgtatagaccca
tggcttaccaagaacaaacgctcgtgtccgatctgcaagaggaaggtctttcctggggat
gacccagacacagaatcagacagctcggatgatgagagaccaacagagagaactccgttg
ctaggcaacagtagcgagccgagtgggcagactaacagaagatccacgtttgacagttca
ggtttaccccctcctactggtgttgtccgagtgaatccaggtcacacctgcagccatgat
tccgaccaatcagagagtgaggagggggcagcaggtggagtcaggcatcttaatctgggc
caagagaatcctcttctctcattgggcagggcaccagtgcatgaaaaaaggccagccaat
cagaaagtaggatctgaagagaagctgaccaatgagaaccaagctgctccaagtagctca
acctatcaggacaagcatgaaactgtggtcactgtaaccaatgaaggggcagataattct
ggttttaggaatgatgatttctcttcagaagaggaggatggagattttggtaaccctggt
gatgctgatgatgttatgtatgttgggaagggcaaagtggatgaaaagaaaaacaacggt
gttgtctga
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