Mya arenaria (softshell): 128221379
Help
Entry
128221379 CDS
T09995
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
maea
Mya arenaria (softshell)
Pathway
maea04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128221379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128221379
Cell adhesion molecules [BR:
maea04515
]
Immunoglobulin superfamily
DCC/UNC5 family
128221379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Neogenin_C
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
Interfer-bind
V-set
C2-set_2
NDNF
Ig_5
TM_ErbB1
Mid2
Kre9_KNH
Cmyb_C
Motif
Other DBs
NCBI-GeneID:
128221379
NCBI-ProteinID:
XP_052785948
LinkDB
All DBs
Position
16:7444343..7540990
Genome browser
AA seq
1543 aa
AA seq
DB search
MGFTHKKKNGPQEISVFFLLTLLLVHINEVSGVPSFTDFFFSTEPTDVIGYKGKSLRMPC
SVVHANRGAPIIDWYKNGAKLDISLDRRLSIEVDGTLVISDIVDRKVETDAGSYHCSATW
EGQIIHSRKCSVQVAGMERNFYIEPEDVEVYLSDTAMFQCAIDSIPAANISWFKDNQPVS
DRPGKFRSYPEGVLEIYNVEFGDLGSYLCSAEGVERSRRSPEVKLSQKRAVISDEFEGNI
PDFTLKPRDTSTLVGSKVILFCGSFGLGSDMSKPTITWLKNEREIDLNKDGRVTMIGGGN
LQILDVKYSNLEGQESDDATYTCRAENDVDSSDAEARLEVLVPPVFTTQPQNLFANEKRD
IIVPCQASGHPKPKITWYKNGEIIAGEAGDYVRVIEDENLQFLGLVMSDSGYYQCFAENS
VGTIQATMQLKVVQQNSPLPISPSTPSIYYHVQRSGAYSATNPDDVPSQPTSLMVAIVST
RYVTLTWSEPDRIGPSEIIAYMIKWVETGSERERVTNTTQREVNILHLRPNSEYQFWVSA
FNRYGGTIVPANIKIRTQEEDDVPTEPQNVQAVPLSPKSVELTWELPTQTKGRLLNYAIF
YYTDNGVEEDQEVHVDSSKTEHLFTDLEEYTEYTFRVVANNTNGVGLASPEVTARTFSDM
PSDMPQNFTLETASSTSLVVRWQPPLLQHCNGKITGYKIRYKKKGAKQGATVTTAGDRVL
YALTDLRKDTQYQVRISAQTVNGSGPPTNWLNGKTYADDLDESHVPEMPDRLVVRPGTNS
LIVQWVPNRRSQYLVRGYYLGYGKGIPDVYRQLFDATTFFYTIENLQPASEYVVSIRGFN
QAGEGPPRYETVFTLEETAEEPITPMLPPIGLKALVLSSQTIVLTWTDNSLGKIQRITDN
RYYTIRYTTIPSKGRYKYSNSTELVHHIEGLKPNAMYEFSVKVTKGRRKSSWSMAVANKT
QEAAPSSIPRDLTAVPVEGDPLAVTLNWQPPQRPNGQITGYLVFYTTDNTKEDLDWVVEG
VLGEKLSLTITELTPDTTYYFKVQARNSKGYGPMSPTKIYKTPKVSVYGGVRPNSGVGGK
VYNGVDGKNYVNEGEDPKEGTTEEKKGGLGGLSQNVMIIIIACVVGATFCIVVAVITVFL
CRRRDHAERNRMARIYKDPVQKAKSPKPSAPPREGQPPDLWIDHDHLELKSIGKDDRGES
SVSIASTRRNSLSSVHTNIPADIYNLSGSEAEERLLPPSYNQLTNSQQRNIIRPKPLKLP
VDAQTHREPVAMVAGYPNSNIMTRYTPAPPRPGSPGEDSGVIPMRPVYPRTQYQMQYAAQ
GPPRVNAGDISNTASSGHAGYPMEYGYRLVPCMEGDDHGHPEAYDESQMHRVGYGGFTTP
SHHGSLNRRHKARTPITGIASPVKHMSSNDISITESTCMTPGIVHSNSGTFAFGRTRSPL
RSFSVPDSPTGKSSTPKHIVKPQQTATPFKKVHTAPPISSGPIKPRAMMAPMVSPKSAPD
VLKTEAEEDIQKSVSTEELTAEMANLEGLMKDLNAITQQDFEC
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgggttttacccacaagaaaaaaaatgggccacaagaaatctcagtcttcttcctgttg
accttgttgctggttcatataaatgaagtctcaggagtcccgtcatttacagactttttc
ttctccaccgaaccgacagacgtgattggctacaaagggaaatcactccgcatgccttgc
tccgtcgtccatgccaaccgtggagctccaatcatagactggtacaaaaatggcgctaaa
ctggacatcagtctcgatagaagactctccattgaggtggatgggaccttggttatttct
gacattgtggacagaaaggtggagacggacgctggcagctaccactgttctgctacatgg
gaagggcagataattcactctaggaaatgcagtgtccaggtggcaggcatggagaggaat
ttctacattgaaccagaagatgtagaagtctacctgtctgacacagcaatgttccaatgt
gctatagattccatacctgcagcaaacatatcatggtttaaagacaaccaaccagtcagt
gatagaccaggaaagtttcgaagctacccagagggggtgttagagatctacaatgtggaa
ttcggggacctgggctcgtatttatgctctgccgagggtgtggaacgcagtcggaggagc
ccggaggtgaaactgtcacagaaaagagcggtgatcagcgacgaatttgaaggaaacatt
ccggatttcaccctgaaaccacgtgacacgtccaccctggtggggtcaaaggtcattctc
ttctgtggctcatttggtctcggctccgacatgagcaagcctacgataacatggctgaaa
aatgagagagaaatagacttaaacaaggacgggcgggttacgatgatcggtggagggaac
ctgcagattttggacgttaaatactccaacctcgagggtcaggaatccgatgacgctacg
tatacgtgccgggcggagaatgacgtcgattccagcgatgcagaggctcgattagaagtt
ttagttcccccagtgttcaccacccagccacagaatctgtttgccaatgagaaacgcgac
atcatcgtaccatgtcaggcatcagggcatccgaaaccaaaaattacttggtacaaaaat
ggcgaaataatcgcgggcgaggcgggcgattatgtccgtgtgattgaggacgaaaattta
cagttcctcggactggttatgtcggattctggatactaccagtgttttgctgagaattct
gtcggaaccattcaggcgacaatgcagctgaaagttgtacaacaaaactccccattaccc
ataagtcctagcactccctctatatattaccacgttcaacgctcaggtgcatacagtgca
acgaaccccgatgacgttccatcccagcccaccagtttgatggttgcgattgtttctacc
agatatgtcacactcacatggtcagaacccgacagaatcgggccgtcagagattattgcg
tacatgatcaaatgggtggagactggctcggaaagagagagagtgacgaacactacacaa
cgagaggtgaacattctccacctgaggcccaactcagagtaccagttctgggtgtcggca
tttaaccgatacgggggaactattgtaccagcgaatataaaaatccggacacaagaagaa
gatgatgtgcctacagaaccacagaatgttcaagctgtgccgttatcgcccaagagcgtt
gaattaacgtgggaacttccgacccagaccaaggggagattgctcaactacgctatcttc
tactatacagacaacggagtggaggaggatcaggaggttcatgttgacagctcgaaaaca
gagcacctgtttactgacctagaagaatacactgagtatacattccgggttgtcgctaac
aacactaacggtgtggggctggcctcgcctgaagttacagcacggacgttctcagacatg
ccatcagacatgccacaaaacttcaccctggagacagcgagctctacgagcctcgttgtg
agatggcagcctccattattacaacactgcaatggaaaaatcaccggttacaagatccgc
tacaagaagaagggcgccaagcagggtgcaacagtcacaactgcaggagatcgagtgctt
tacgcgctgactgacttacggaaagacacgcaatatcaagtcagaatctctgcccagaca
gtgaacggcagtggacctccgacaaattggttaaatggcaagacttatgccgatgatctc
gatgaatcccacgtcccggagatgccagaccgtctagtcgtccgtcccggcacaaactcc
ctgattgtgcagtgggtccctaacaggcgttcacagtacctcgtgcgagggtattacctt
ggttacggcaagggcattcccgatgtgtaccgccaactgtttgatgcaaccacgttcttc
tatacaattgaaaatctgcagccagcctcagagtatgttgtctccatccgaggttttaac
caggctggtgaagggccgccaagatatgaaactgtctttaccttggaggaaacagccgag
gagcccatcactccaatgcttcctccgataggactcaaggcgctggtgttatcctcccag
acgattgtactcacatggaccgataactcactgggaaagattcagaggataacggataac
cgatattatacgattaggtataccacgattccaagcaaggggcgttacaaatattccaac
agtaccgagctggtccaccacatcgagggcctgaaacccaacgccatgtatgagttcagt
gttaaagttacgaaggggcgacgaaagagtagctggtccatggcggtggccaataaaacc
caggaagctgcaccaagctcgataccccgtgatttaacagctgtcccggtggagggcgac
ccgctggctgtgaccctgaactggcagcccccccagaggcccaatggtcagatcacaggg
tacctggtgttctacacaacagacaacaccaaggaggacctggactgggtggtggaggga
gttctaggggaaaaactctccctcaccataaccgaactcacacccgatactacgtactat
ttcaaggttcaagccaggaacagcaagggttatggccccatgtctcctaccaagatctac
aagacccctaaagtgtcagtttatggcggtgttcggcccaactctggagtcggaggaaag
gtgtataatggagtcgatgggaagaattacgtcaacgagggtgaagatccgaaagaggga
actactgaagagaagaaaggtggactgggaggattatctcagaatgtcatgatcatcatc
atcgcgtgcgttgttggggcgacgttttgtatcgttgttgcagtgatcactgtgttcctt
tgtcgtcgtagagaccacgcagagagaaaccgaatggctcgaatttacaaagacccagtc
caaaaagccaaaagccccaaaccatctgcccctccacgagagggccagccccctgacctg
tggattgatcatgaccacttggagttgaagagtataggtaaagatgatcgaggggagtcg
tctgtgtccattgcatcgacgaggaggaattcactcagtagtgtgcacacaaatattcca
gctgacatctacaacctatcaggaagcgaggcagaagagaggctacttcctccaagctat
aaccagctcacaaattcacaacaacgaaacattattcggccaaaaccattaaaattacca
gtagacgcacaaacacacagggaacctgttgcaatggtagctggttatccgaatagcaac
ataatgacgcggtacacgcccgccccacccaggcccgggagcccaggggaagactcaggt
gtgatacccatgaggcccgtgtacccacggacccagtatcagatgcagtacgccgcccag
ggccctccaagggtgaacgcgggtgacatctcaaacactgcctcatctgggcatgctggg
taccccatggaatatggctatcgcctggttccctgcatggaaggagatgatcatggtcac
ccagaagcttatgatgaatcacaaatgcacagagttggctatggcggattcactactcca
tctcatcatggctctctcaatcgaagacacaaagctcgcacccctattactggaatagcc
tcgcccgttaaacacatgtcatccaatgatatttcaataactgaaagtacatgtatgaca
cctggaatagtccattccaattcggggacctttgcttttggtcgtacccgatcccctctt
aggagttttagtgtacctgactcccctactggaaagtcgagcactcccaaacatatagtg
aagccacaacagacagcgaccccatttaaaaaggttcacacggcccctcccatttctagt
ggaccaatcaaaccccgcgccatgatggcccctatggtgtcccctaaatctgctccagat
gttctgaaaacagaagcagaagaagacattcagaagtcagtgagtacagaggaattgaca
gctgaaatggcgaacttggaaggacttatgaaagacttaaatgccataacacaacaagac
tttgagtgctag
DBGET
integrated database retrieval system
