Mya arenaria (softshell): 128221912
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Entry
128221912 CDS
T09995
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128221912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128221912
Spliceosome [BR:
maea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128221912
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
128221912
NCBI-ProteinID:
XP_052786535
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Position
2:complement(43487507..43511655)
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AA seq
645 aa
AA seq
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MADNSTLVEQNNPSKASNSPLKRKLDSQDSTSRNNVENKKTKTEDSVKSNRKSSPERKER
KKEKKSKKSKEEKKKLKQALKKEVDEAFFEVEIAPVQDPKVDKSRICPYLDTINRSLLDF
DFEKLCSVSLSHINVYACLVCGKYFQGRGNKSHAYTHSVQDAHHVFLNLSTHKFYCIPDN
YEIIDSSLDDIIYVLNPTFTSEHISSLDSSSKLSRAYDGTTYLPGIVGLNNIKANDYCNV
VLQALSHVMPLRNYFLQEASYKTIKRPPGDQMFLVVQRFGELLRKLWNPRNFKAHVSPHE
MLQSVVLCSKKRFQITSQGDALDFLSWFLNAMHGALNGTKKLSSSIINKTFRGKMKVFSR
KVPPLEMAEHEKQKLLLTPEYQEREEEMPWLYLTCDLPPTPLFPDELQENIIPQVPFHSI
LAKFNGVFEKEYKTSKDSTLKRFQLTKLPPYIIVYVKRFTKNFFVQEKNPTIVNFPIKNI
DFGDLLSTEVRARHRNTTYDLMANIVHDGEPGPGKGTYRVHILHKGSGKWYELQDLHVAD
ILPQMITLSESYIQIFELRTDIPNPSYEPSRQAASGNKKPIRKSADQSAGSGNQAGKSKS
QSESSGKQKGTSDNQSENSGNQSASNGDNAGDNAEEQSDDMDTGE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaattcgacgttggtcgagcaaaataatccgtctaaggcttcaaacagtcct
ttaaaacgaaaacttgacagtcaggacagtacaagcagaaataatgttgaaaataaaaag
acaaaaaccgaagattctgtgaaaagcaacaggaaatcttcgccagagcgtaaagaacga
aagaaagaaaagaagtcgaagaaaagtaaagaagaaaagaagaagctgaaacaagctttg
aagaaagaggtagacgaagcatttttcgaagtggaaatagcacctgtccaggatccaaag
gttgataagagcaggatatgtccctaccttgatacaatcaacagatctttgttggatttt
gactttgagaagctatgctctgtctcactttcacacatcaacgtgtacgcctgtcttgtt
tgtggaaaatactttcaagggcgtgggaacaagtcccatgcatacacccacagtgttcag
gatgcacaccatgtatttctgaatctttccacccacaagttctactgtatccctgacaac
tatgagatcattgactcttctcttgatgacatcatctatgttttgaaccctacatttaca
agtgagcatatatccagtctggatagttcatccaaattgtcaagggcatacgatggcaca
acatatctccctggtattgttgggctgaacaatatcaaagcaaacgattactgcaacgtg
gtcttacaggctctctcacatgtgatgcctctgaggaactactttcttcaagaggcgagc
tacaagactatcaaacgtccgcctggtgaccagatgttcctggtcgtgcagaggtttggt
gagctgctacggaaattgtggaacccacgtaacttcaaggcccatgttagtccacatgag
atgttacagtcggtagtgctgtgcagcaagaagagattccagatcacaagccagggtgat
gccctagattttctgtcctggttcctgaatgcgatgcacggcgcacttaatggaacaaag
aaactctccagctccataatcaacaagacgttccgtgggaaaatgaaagtcttctctcgg
aaagtccctcctcttgaaatggctgaacatgagaaacagaagttgttgctgaccccggag
tatcaggagcgggaagaggaaatgccctggttgtacctgacctgtgacctgccgccaacg
ccactctttcctgatgagcttcaggagaatatcatcccccaggtgcccttccactcaatc
ttggctaagttcaacggggtgttcgagaaagagtacaagacaagtaaggactcaacgctc
aagaggttccagctaaccaaactaccaccatacatcatcgtctatgtaaagagatttaca
aaaaacttctttgtgcaggagaagaacccaacaattgtaaacttccccatcaagaacata
gactttggtgacttgttgtcaacagaggtgcgtgcccgccacaggaacacgacctatgat
ctcatggcaaacattgtacatgatggggagccggggccaggcaagggcacgtacagggtc
catatactccacaagggttcgggcaagtggtatgaacttcaggatcttcatgtggccgat
atcctgccccagatgatcacgctgtcagagagctacatacagatatttgaacttaggaca
gacataccaaacccttcatatgagccttcaagacaggcagccagtggtaacaagaaacca
atcagaaaaagtgctgaccaatcagcaggcagtggaaaccaggcaggaaaatcaaagagc
caatcagagtcaagtggtaaacagaaaggaacatctgataaccaatcagaaaatagtggg
aaccagtcagctagcaatggggataatgcaggtgacaatgctgaggaacagtcagatgat
atggatactggagaatga
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