Mya arenaria (softshell): 128222152
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Entry
128222152 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128222152 isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128222152
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
128222152
3'-5' decay
Other 3'-5' decay factors
128222152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
DUF4559
PAM2
ResIII
zf-CCCH
AAA_19
UvrD-helicase
RT_RNaseH
Bac_DnaA
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
128222152
NCBI-ProteinID:
XP_052786984
LinkDB
All DBs
Position
16:complement(50523344..50552399)
Genome browser
AA seq
2177 aa
AA seq
DB search
MTFESQLKLGQFRNWVRSSIGLRCLKDGLLDYVSTKTEEQYETFVTYVKGRAKIDTFTCE
KCELCNLLPHHALEKRPCNQKNVKSCNCKRQGGRRICPEGGACGIFYDCVIDEHSQKDPS
WCNTSVELWSTNSFEFLKCYISTPGYKNKISLSQIDASGLLSICLNNMGLNAAFNNILDL
LKKVKDYRNEILHSGDLKISNERLKEYLNDMKGILQHSELDENEAAQRELKQLQMLETDE
IVITSQEGINMRKDALKAVIEREIELKLNLSDEYSSLSTDDDTTTVKTPLTNGDTSVVKA
TLTAEERDKIEKELAQLVCIENKHYRCIEASLQEVEKEMLSVKDTIRTHRSDLEEIKTGL
LSQHNVLRSLSEEQQKQSKVLVETHTLLEDVCATGIETHSTAQATHKVALQSSNDIKELT
EQIRRMNAPNVVPELKLTVNISNTDKNGEKQLSQRLVEVGTSIVNMEKIPPEKKTQLRHC
LKMALNEIEKDENEVTALKEECLAIYVRSKSLIAWADLCERCLAKEFTQTFRSVEREVRR
LTGLKNVELDVVVYEEDFLKSVNAIVSGSTRSETIQENDNANTNREVEEVRTVQTSSGRR
RYQICFTFESSSDSDESSTARKETSSNDNTVTADFLDGLDEDEDNETNEDEYDKDVIEMI
EIDTRNTIMKESHMGQADIPNELVCNSCRKKFHASEELSDHLSEYSNISHRLSDERSKWT
QRSPPRGVKLENFTLCERYSKKKACPYGDKCTRPHTDSELKEWNKRLESMRQLVLHIGEN
IEGLALGYSLHKLFKEEKQMKATRQELDFVFIQSLSDLNVHTITKRFKNKWTFKINSEYS
LKSVCLTDQEASTYYSISNITDSTDNRDDCYERFQQKDEWKNPKYLLDRGVYKYTIKVAF
QTEIYGSFYQNIIFDFGKPELLLKQVAVESAPVTSVDEVRDKFEKQCKVRWQEENVNVME
FFERTEEDDIGIKLMKQYPLKELLSEEFPDSLNRENYTTWMHMMLYSEEQAGLEEISRFN
IKTYLILEDCLKPIDNPTSETLYAQDGELFARISLNDELSVDSKIGKMILRQTHMIWIAP
VAAESGYAHSKMTVYEARIEHRERDFIDVELSRQCVQGLKLKCGLEIQVEIQFQLDRVVF
CEMHRAVDNLHHLDFVFPPLLHTHDFQKAASVLERTFDNEGMGDLNQNQITAVVKSSCTL
KKVTPPLLIVGPYGTGKTYTIAQAVKYIITQSMKSPQEPKSRVLISTSSNSEADAYIKDY
MHQFVEAGISEARPLRIYYKYRWKQTVPKTVLAYCTLEENDGKKGTFRSPTKAEVSQHRV
IVTTLHTAKLLTYLDLPEDFFTHIFIDEAAQSLECDLLIPISLAGAKTRIILAGDHMQIS
PDVCSKIAQQEQFQMSMLERLAEYYLVDSPFVVTLGDNYRSNKAIIDFTSALFYDSRLKA
VKNPAPHKVYYPLTFFTARGKEIMPDLKIGYYNMSELYEVVDQVQQLCKHWPREWGRFDR
KSICVVSTYTMQIWCIRAELRRRGIYYVPVEMVTNVQGKQFRVIIMSTVRTKHTCSVNTV
DNDDYDLGFLSNLKLLNTVITRAQSLVIAVGDPVALCLIGRCSKVWEYYLEICNDHGSFF
GLTWKHFKSLLENTEVEETYRLNPLAKEFVPRTCINSIRVPPNSPVSAVESVARPLSQEN
KFGDLKQPAVTHPLQSIAVPPCVDRTAVELLTEQIPSIDNVQFGLPAPHANMNVVPSTTM
TESSMFSIHSEINVEQALPLKTQQDTVFNRDPGYIRSQRYHGMNPDATLFKPGIAKISRT
SIDLPPSPGSFKMNPEATEFIYEQTNIVQTSIDPLPSQGSDKGNSDATENMHGSTNIPPE
SIYCLPTWDKGSLPHLNYLNPCGGLNQLPSTVEGTSDASFEQHAVFPSEVENTAENPEIV
HDLYGKDNNDSLIHLLGTQNDNKETKKDQLTTKTFETRADHYNIAFSDEITSLIESKSSA
TGHLLSKDKADLKRNDNPYRLQTIREKESFQFDNADGFIMRRHRSNPTTRNEQSWYRKTD
DARLESVGIKSYDETPSKNSSRTKQIGKKIGVIRYVPGFVKPDAGECSEDWIKSILNPSI
DIFNPNVNSPQYPRQAVRSGNIGIVKSAESLNKTDDQKVFREAEYTSAVPSKEKPEEDGF
EKLSYAEIVKKRAEKNL
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgaaagtcaactgaagcttgggcagttccgaaattgggtgagatcgtcgatc
ggtcttcgttgcttaaaggatggtctcttggactacgtttcgacgaagactgaagaacaa
tatgaaacatttgtgacatacgtgaaaggcagagccaaaatcgacacgttcacttgtgaa
aagtgtgaattatgcaaccttttacctcaccatgcgctagaaaaacggccatgtaaccaa
aaaaatgtcaaatcttgtaattgcaagcggcaggggggcagacggatttgtcctgagggc
ggggcttgtggcatattctatgactgtgtcattgatgaacattctcaaaaagacccaagt
tggtgcaacacttcagttgaactctggtcgactaatagctttgaatttttgaaatgttat
atttcaacacccggatacaagaacaaaatatctctttctcaaatagatgcgtctgggctg
ttgagcatatgtctgaacaatatgggattgaatgctgctttcaataatattcttgacttg
ttaaagaaggttaaagattataggaatgaaatacttcattcaggcgatctcaagatcagt
aacgagaggttgaaagaatacctcaacgacatgaaaggaattttgcaacattccgaactg
gatgaaaacgaagctgcgcaaagagaactaaaacagcttcaaatgctagaaaccgacgag
attgtcatcacatcccaggaaggtatcaatatgagaaaggatgcattaaaggcagttatt
gaaagagaaatcgaattgaagcttaatctctccgacgaatattcatccttatcaacagac
gatgacacgacgactgtgaaaacgcctttaaccaatggcgacacatctgttgtgaaggcg
actttaacagcagaagagagggacaaaatagaaaaagaactcgctcagctagtttgtatt
gaaaacaagcactacaggtgcatagaggcttcgcttcaggaagtggaaaaagagatgctg
agtgtaaaagatactataagaacgcacagatcagatttagaagaaatcaaaacgggcctt
ctttctcaacataatgttttgcgttctttgtcagaggaacaacagaaacaaagtaaggtt
ttggtggagacacatactttgctcgaagatgtttgtgcgacaggaattgaaacacattct
acggcccaagcaactcataaagttgccctacaatcaagcaacgatatcaaagaacttacc
gaacagattcgacgaatgaatgctccgaatgtcgtgccagaactgaagctgacagttaac
atctctaacactgacaaaaatggcgaaaagcagctgtcacagaggctcgttgaggtcggt
accagtatcgtaaatatggagaaaattcctcctgaaaagaaaacacagcttagacattgt
ctgaagatggcattaaatgaaattgaaaaagatgaaaacgaagttacggcattgaaagaa
gaatgtttagctatttatgtacgaagcaagtctttgatagcctgggctgacctttgtgaa
aggtgtcttgcaaaggagtttacacagacatttagatcagtagaaagggaagtaagacgc
ctgactggtttaaaaaacgttgaattggacgtagttgtctacgaagaggactttttgaaa
tctgttaacgcaatagtctcaggttcaacgagaagcgaaactattcaggaaaatgataat
gcaaacaccaacagagaggtcgaagaagtgagaactgttcaaacgtcatccggaagaaga
cgataccagatttgcttcacttttgaatcgtcaagtgattcagatgaaagttcaaccgcc
agaaaagagacgtcctcaaatgacaatactgtgacggcagatttcctggatggcttagac
gaagatgaagataatgaaacaaatgaagacgaatatgacaaggatgtgattgaaatgatt
gaaatcgacacacgcaacactattatgaaagaatcacacatgggacaagctgatattccg
aatgaattggtctgtaactcatgcaggaaaaagttccatgcaagtgaagaactttccgac
catctatcagagtactccaatatcagccaccgtctctccgatgagcgttctaagtggaca
caaaggtctcctcctagaggagtgaaacttgaaaacttcactctttgtgaaaggtattca
aagaagaaagcatgtccgtacggagataaatgcactagacctcacactgatagcgaatta
aaagaatggaataagcgactggaatcaatgagacaacttgttcttcatattggagaaaat
attgagggtctagcgttgggttattctttgcacaagctttttaaagaagaaaagcagatg
aaagcgacaaggcaagagcttgattttgtattcatccaatctctctctgatttgaatgta
cataccatcacaaagaggttcaagaataaatggacgttcaaaataaacagcgagtattct
ctgaaaagtgtgtgtctaactgaccaggaagcttcgacgtactacagtataagtaatata
acagacagcacagacaaccgtgacgattgttacgaaaggtttcaacaaaaagatgagtgg
aaaaacccaaaatatttgttggaccgaggtgtatacaaatatacgataaaggttgcattc
caaacagaaatatacggatcgttttatcaaaacatcatctttgattttggaaagccggaa
cttcttctcaaacaggtagctgtagaatctgcgcctgtgacaagcgttgatgaagttcgt
gacaagtttgaaaaacagtgcaaagtgagatggcaggaagaaaatgtgaacgttatggag
ttctttgaaagaacggaggaagatgatataggaatcaaacttatgaagcagtatccgctt
aaagagctcctatcagaagaattcccggattctcttaatagggaaaactacacgacatgg
atgcacatgatgttgtattcagaggaacaggctggactggaggaaatttcaagattcaat
atcaagacatacttgatcttggaagattgtcttaaaccaattgacaacccgacgtctgaa
acactctatgctcaagatggagaactgtttgcgcgaatttctctaaacgacgagttgtct
gtcgattcgaaaattggaaaaatgattctgagacagactcatatgatatggattgcacca
gttgcggctgaaagtggatatgcacattcaaaaatgacggtttatgaagcccgaatagaa
catagagagcgtgatttcatagatgtagaattgtccagacaatgcgtacagggacttaaa
cttaaatgtggactggaaattcaggtcgagatacaatttcaactcgaccgcgtcgtattt
tgtgaaatgcatcgggctgtggacaacttacatcacctagactttgtttttccgcctctc
ctccacacacacgattttcaaaaggcagcgtcggttctagaaaggacattcgataacgaa
gggatgggagatcttaatcaaaaccaaattactgccgtggtcaagtcttcctgcacccta
aagaaagtgacgccaccgcttcttattgttgggccctacgggacgggaaagacatatacg
attgcacaggcagtgaaatacatcatcacccaaagcatgaagtctccacaagaaccaaag
tctcgagtgctcataagcactagttcaaacagcgaggctgacgcgtacatcaaagattac
atgcaccagtttgttgaagctggcatctctgaagcccggccactgagaatttactacaag
tatcgatggaaacagactgttccaaaaactgtcctggcttactgtacactggaagagaac
gacggaaaaaaggggacatttcgatcaccaaccaaggccgaggtttctcaacacagggtt
attgtgactaccttgcatactgcaaagctgcttacctatctagatcttccagaagatttc
ttcacgcatatattcatcgacgaagcagcgcaatccctggaatgtgacttgctaatacca
atttcattggctggagcaaaaacacggattatacttgctggtgatcatatgcagataagc
cctgacgtttgttcaaagattgcccagcaagaacaatttcagatgtcaatgctagagcga
cttgcagagtattaccttgttgacagcccgtttgttgttactcttggtgacaattatcgc
tctaacaaggctatcattgacttcacctcagctctcttttatgacagccgtttgaaagca
gtcaaaaatcctgcacctcataaggtttactatccgctcacgtttttcactgccagagga
aaagaaatcatgcctgacttgaagattggatattacaacatgtctgagttgtacgaagtt
gttgatcaggtccaacaactttgtaaacactggccgcgagaatggggaaggtttgacaga
aaaagcatctgtgttgtctcgacatacaccatgcagatatggtgcatacgagcagagttg
cggagacgagggatttactacgtcccagtcgagatggttaccaacgttcaaggcaaacag
tttcgtgtgatcatcatgagcactgtacgcaccaagcacacctgttctgtgaataccgta
gacaatgatgactatgatctcggattcttgtcgaacctaaagctgttgaacacggtcatt
acaagggcacagtcgttggtcattgctgttggtgatcctgttgctctatgcctcatagga
cgctgcagcaaagtatgggaatattacctggaaatatgcaacgaccatggaagctttttt
ggcctgacatggaaacattttaagtcgttgctggaaaatactgaagttgaggaaacatac
aggctgaatccactagccaaagagttcgtaccaaggacgtgtatcaacagcatccgagtt
cctcccaacagtcctgtatctgcggttgaatcagtcgctcggccattatcacaagaaaac
aagtttggagatctaaagcagccagctgtgacacatccgttgcaaagcattgcagtgcca
ccttgtgtagatcgaacagcagtggaattgctaacagagcaaataccttcaattgacaat
gttcaatttggactacctgcaccccacgcgaatatgaatgttgtaccgtcaacaacaatg
accgaatcctcaatgttttcaatacacagcgagataaacgtcgagcaagcgttgccatta
aaaacacagcaagataccgttttcaatagagacccgggctatataagaagtcaacgatat
catggtatgaatccagatgcaacattgttcaaacctggcattgcgaaaatctcacgaacc
tcaattgatcttccgccatcaccgggatcgtttaagatgaacccagaagcaacagaattt
atttacgaacagacaaacatcgttcaaacatcgattgatccattgccatcacaaggatct
gataaaggaaactcagatgcgaccgaaaatatgcatggtagtacgaacatcccaccagaa
tccatttattgcttgccaacatgggataagggaagtttgcctcatttgaactatctaaat
ccttgtggtgggcttaatcaattgccgtcaactgttgaaggtaccagtgatgcgtcgttt
gaacaacatgcagtgtttccttctgaggtcgaaaatactgccgagaacccggaaatcgtc
catgacctttatggaaaagataacaatgattctttgattcatttgcttggaacacaaaac
gacaacaaggaaaccaaaaaggatcaattgaccaccaagacatttgagacacgagcagat
cattacaatattgcattttctgatgagataacgtccctgatagaatcaaagtcgagcgcc
acaggtcatttgctgtcaaaagacaaggccgatcttaagaggaacgacaacccgtatcga
ctgcagacaataagagagaaagaaagtttccagttcgataatgctgatgggtttataatg
cgtcgtcaccgatcgaatccaaccacaagaaatgaacagtcctggtatcgtaaaacagac
gacgctcgcttagaatcggtcggaataaaaagttatgatgagacgccatcaaagaattcg
agcagaacaaagcaaatcggaaaaaaaatcggcgttattcgttatgtaccaggtttcgta
aaaccagacgccggtgaatgctcagaagattggataaaatctattttgaatccgtccata
gatatatttaatccaaacgtaaacagtccgcaatatccacgacaggccgtgcgttctgga
aacatcggtattgtgaaatccgcggaaagtttaaacaaaactgacgatcagaaggttttt
agagaggcagaatatacatcggcagtgccttcaaaagagaagccagaagaagatggtttt
gagaaattatcttacgccgaaatagtgaaaaagagagcagagaaaaatctgtga
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integrated database retrieval system
