KEGG   Mya arenaria (softshell): 128222154
Entry
128222154         CDS       T09995                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
maea  Mya arenaria (softshell)
Pathway
maea03018  RNA degradation
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128222154
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128222154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128222154
   03041 Spliceosome [BR:maea03041]
    128222154
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128222154
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     128222154
Spliceosome [BR:maea03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    128222154
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 128222154
NCBI-ProteinID: XP_052786990
LinkDB
Position
16:complement(37888927..37898284)
AA seq 118 aa
MSAQSVPKQQQGDRGGGGDKEKKKKETILDLSKYLEKAIRVKFSGGREASGILKGFDPLL
NLVLDDTTEFLRDPDDPYKLTEDTRSLGLVVCRGTSVVLICPSDGMEAIANPFIQQEG
NT seq 357 nt   +upstreamnt  +downstreamnt
atgtcagcacagagtgtaccaaaacaacagcagggagatagaggtggtggtggtgacaaa
gaaaagaagaaaaaggaaaccattctcgatctctccaaatatctggaaaaggctatcagg
gtcaagtttagtggtggaagggaggccagtggaattttgaagggttttgatcctctcctg
aatcttgtgttagacgacactacagaattcttgcgagaccctgatgatccatacaaactc
acagaagacaccagaagcctggggctggttgtgtgtagagggacttcagttgtgttgata
tgcccatcagacggtatggaggcaatcgcaaatcctttcattcagcaggaggggtga

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