Mya arenaria (softshell): 128222189
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Entry
128222189 CDS
T09995
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128222189
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
128222189
3'-5' decay
Other 3'-5' decay factors
128222189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
PhoH
PAM2
ResIII
AAA_22
SRP54
AAA_5
Motif
Other DBs
NCBI-GeneID:
128222189
NCBI-ProteinID:
XP_052787048
LinkDB
All DBs
Position
16:complement(50237962..50261231)
Genome browser
AA seq
1404 aa
AA seq
DB search
MEKVAANFPPFDLPDTVESVQYATINQTSDLNISLPKKPLTHKWVFEIQSSIFLRRVTLA
NDSAIDVFLIHRVFDKTEDTIVYPTSLDWENKNKSRKRDSFQYEIEVAFSSEVYGCFRGR
VIFDFGHTPVVFKQLTVRTTESTDVRAPKRSQSKDQHTRWQAKDVKVVEFQLRNQEERQL
IEEYSIDKFDEGTYPSTPSPTKRDYTNLKRAMEISSPEIFSKTDDEKTDSKTSNTGEDYE
QTRGVNRPTLSEYKRRMHKLLYFEEKTQLSVISKFDGKREMTIENELPPVIEISSDAIYA
TNGALFTSIELKDELSEDTTAGRLVLRNSDSVWLTPVFEHAVGSRKIPEKVYEAGVHHRQ
RNFLDFELSPVCVSELGLETKQTRNFEVQLQLNRIWLCEMHKAVDELQNLEIVFPNSVSS
CDVDTSITDNDHFQNDLSLKTCNDNQYIAIIKAASVPKVLSPPLLLVGPFGTGKTFTLAQ
AAKVVIQKDCTRVLICTHSNSEADIYVEDYFHPYCKDNHPEAKPLRIYYQHRWPNTVSKT
VRQYCLQEGHSFRKPRREDILRHRIVVTTFSTAKMLTKFPEDMFTHIYLDEAAQVLECEA
LIPLSKATQSTRVVLAGDQMQMSPEIYSLEGKKEGFQKSLLERLNDLYPDDCGYKVMLHV
NYRTHDVILKFTSNLFYDYKLSCAMPQKGHPELYPLAFYTVLGEDELCGLKEGFCNKAEV
CEVVDQVALLKEKWPSNHWGEFSSKSIGVVAPYRMQVKLIRDGLRKINIKDVSVERVANV
QGKEFRVVIMSTVRTKETCTEGYEETDQVDFGFLSNVKFLTTVITRAKSLVMTIGDPITL
CLVGQCRKVWETYLNDCNTHGSFYGLKWEQYLKMRNIELTTLNPMADEFYPKVPPASVEE
AKNENKAEPKSSTKSSHVTFEQEQFRTSELPNTKEETSIPINGTLMDSAKSGVLQSAIEI
EHADNCLDATKAVEALTHHDSHLNADSCKSLHQSDGQKENVSMTGTSTVPSFKYIYEKED
NPSAYQGSMKYHCPSIVSLGESIETGYGSGIGIESDDISPELKQCISTDTHKVDDHPVKR
LTVDSISPESKSDETGKSSKNSRKIKTKRPQPEVTEIKQQPVFEPKVASCTEENLHSKQK
IYNIEQERIGQGKGARKKKGKLQSTETVSPLKEIAEIPDWRKLAMPKANFESRFKEPVLS
KTEQADSKNKEEAIRISNYFELSSKNKPNESENDLSFPRAEKHTSNKTSAGKDETKTTTG
KKKTKRPKFVSLHEFYKAPQTERTLRPPAWVNPAPADVPNWESVWDPEPYSFEDERPYRP
VNTGLSFADATKSAPARHQGILTPVTYTEERSLASYLWPEQDQVYMNRGPSQGNNHNYSS
LLYNQSIGPSRGPSSGYGVFGRRK
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggttgctgctaatttccctccgtttgatttgccagacacggtggaaagtgtg
cagtatgcaaccatcaaccagacctcagatcttaacatcagtctaccgaaaaaaccacta
actcataagtgggtgtttgaaatacaaagtagcatatttcttcgaagagtgacgctagcc
aacgatagtgcaatcgacgtgtttttgatccatcgtgtctttgacaaaacggaagacacc
atcgtttatcctacttcacttgactgggaaaacaaaaacaaatccaggaaaagagattca
tttcaatacgaaattgaggtggctttttcttcagaggtgtacggttgtttccgtgggagg
gttatctttgattttggccatacgcctgttgttttcaagcagctaaccgtaaggacaaca
gaaagcaccgatgtcagggcaccaaaacgttcacaaagtaaagatcaacatacgcgttgg
caggcaaaagacgtcaaggttgttgagtttcaactaagaaaccaggaagaaagacagctg
atagaggagtattcgattgataaatttgatgaaggtacatacccgtctacgccatcgcca
actaaacgtgattacacaaacctaaaaagagccatggagatttcatcacctgaaatattc
tccaaaacggacgacgaaaagacggattcaaaaacgtccaatactggagaagattacgaa
cagacacgtggggtaaatagaccaaccttgagtgaatacaaacggcgcatgcataaactc
ctgtacttcgaagagaaaacgcaactctctgtcatttcaaaatttgatgggaaaagagaa
atgacaattgaaaacgagttgccacctgtgattgaaattagctcagatgcaatttacgca
acaaacggcgctttgttcacaagtattgagctgaaagatgagctgtccgaagataccact
gctgggagattagtcctccgaaattctgattctgtttggttgacccctgtctttgaacat
gccgttggatcacgaaaaatacccgaaaaggtatatgaagccggtgtgcatcatcgtcaa
aggaatttcctagactttgagctatccccggtgtgtgtttccgaacttggtttagagacg
aaacagacgaggaattttgaggtgcagcttcaactgaatagaatatggttatgcgaaatg
cacaaggcagtggatgaactccaaaacctcgagattgtctttccaaattccgtctcgagc
tgtgatgttgacaccagtattactgataatgatcattttcaaaatgatttgtcgctgaaa
acgtgcaacgataaccaatacatagcaataataaaagctgcaagtgtgccgaaagtactg
tctccacccctgctccttgttggtccgtttggaacgggtaaaacattcacactcgcccag
gcagcaaaggtcgttatccagaaagattgcacacgcgtactcatatgtacgcattcgaac
agcgaagccgacatatatgttgaagactactttcatccctactgcaaagacaatcaccca
gaagcaaaacctctccgtatctactatcaacacagatggccaaataccgtgtctaaaact
gtccgacaatactgtctacaggaaggccattcatttagaaagccaagaagggaggatata
ttgcgtcacagaatcgttgtaactacattcagcaccgctaaaatgctaacgaaatttccg
gaagatatgttcacacacatataccttgacgaggcagcacaggtgttggaatgcgaggca
ctcatacctctatctaaggcaacgcagtccactagggttgtgttagcaggagaccaaatg
cagatgagtcctgagatatattcattagaagggaaaaaagaaggatttcagaagtcatta
ctagagagattaaatgacctttatccggacgattgcggatacaaagtcatgttgcacgta
aactacagaactcatgacgtcattttgaagttcacatctaaccttttctatgactacaaa
ttgtcatgcgcaatgccacagaagggacatcccgaactttaccctctggcgttttacacc
gtgttaggcgaggacgagctgtgcggtctgaaagaaggattttgcaacaaagcagaggta
tgcgaagttgttgaccaagttgcactgctaaaagagaaatggccttcaaaccactggggt
gaattcagttcaaagagtataggcgttgttgcaccgtatagaatgcaggtgaagctaatc
cgagatggactgcgaaaaataaacatcaaagacgtttccgtagaaagggttgctaacgtg
caaggaaaggagtttcgagttgttataatgagcacagtcaggacaaaggaaacatgtaca
gagggctatgaggagactgatcaagtcgactttgggtttctttcaaacgtgaagttcctg
acaacagtaataacaagagcgaaatcgcttgtgatgactatcggagacccaattacactg
tgtttggtgggacaatgtcgaaaggtgtgggaaacgtaccttaacgactgcaacacacat
ggaagtttctatggactaaaatgggagcaataccttaagatgagaaatatagagctgacc
actcttaatccaatggcggacgaattctacccgaaggtaccacctgcttcggtagaggaa
gcaaaaaatgaaaataaagcagaacctaaaagttcaacgaagtcatcacatgtgacattc
gaacaagaacagtttagaacaagcgagttgccaaatacaaaggaggaaactagtatacca
attaatggaactttgatggacagtgccaagtccggtgttttacaaagtgctatagagatt
gaacatgctgacaattgtcttgacgcaacaaaagcagtagaggctttaacacaccacgac
agtcatttaaatgcagatagttgcaaatcattacaccagtcagacggacaaaaagagaat
gtatccatgactggtaccagcactgttccaagctttaaatatatctacgaaaaggaagat
aacccatctgcttaccaaggatcaatgaaataccactgtccttcgatagtgagtttaggg
gaaagtatagaaaccggttatggtagtgggattggaatcgagtccgacgacatctctccg
gaattaaaacagtgtatttcaacagacactcataaagttgacgaccatccggtgaaaagg
ttgactgtcgactcgatttcccctgaaagcaagagcgatgaaaccggcaaatcatccaaa
aatagtaggaagataaagacgaaaagaccacaaccggaggtcactgaaattaaacagcag
ccagtttttgaacctaaagttgcaagctgtacagaggagaatttacattctaaacaaaag
atttataacatcgagcaagaaaggatcggtcaaggaaagggcgcaagaaaaaagaaggga
aaacttcaatcaacggaaactgtttcaccactgaaagaaatagctgaaatccccgattgg
agaaaattagcgatgccgaaagcaaactttgagtctcgcttcaaagagcctgtcttgagc
aaaactgaacaagctgacagtaaaaataaggaggaggcgatacgtatttcgaattatttt
gaacttagcagtaaaaataaaccaaatgaaagcgaaaacgatttatcatttccccgtgca
gaaaaacatacttcaaataaaacctcggctggtaaagacgaaacaaaaacaaccacagga
aagaaaaagacaaaacggccgaaatttgtttcattacatgaattttacaaagcccctcaa
accgaaaggacacttcggccaccggcgtgggtaaatccagctcctgcagatgttccgaat
tgggaaagtgtttgggatcctgaaccatattcatttgaggatgaacgaccatatcgtcct
gtaaatacaggtctatcctttgctgacgctacaaaatctgcaccagcgaggcatcaaggg
atccttacaccggtcacctataccgaggaacgttctttggcctcttatctatggccagaa
caagatcaggtttacatgaatcgaggtccttcgcaggggaataatcataattactcatcc
ttgctctacaatcaaagtataggtccctcacgcggtccgtcgagtggatacggagtgttt
ggaagacgtaaataa
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