Mya arenaria (softshell): 128222360
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Entry
128222360 CDS
T09995
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128222360
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
Transposable elements
128222360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
DUF3450
DDE_Tnp_1_2
FtsX
LMBR1
Pex24p
DUF4131
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
128222360
NCBI-ProteinID:
XP_052787297
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All DBs
Position
16:complement(3141672..3174700)
Genome browser
AA seq
468 aa
AA seq
DB search
MSRRKESFRMDPVLYLPFPPLFLVVLIGVVILCVFLWLRSPGPSSTKNEETIRMDPVLYL
PFLPLFLVVIVGVVTVCVFIRIRPPGPPSTENEETIRQTQQKEKEIEDRTRERADLLDTI
RARDREIQKAREKERNLRMKIEKLEEEYDRMKLEELAIRMDDDRKKHVVEMEEYTVKAVQ
VSFTNDGVAFLEDILNDDIKRETHRNRALSVRQMVLITLRFLATGPFFSVVGDSMGYHKS
TVSRVVTHVTEIICKSMKRFIVWPSDEEKNRVKSGFFTSAGFPHVVGCVDGTHIRIQALS
VDEPAYVNRKGYHSINMQAVCDHEGLFTSVNASWPGSCHDSHVFRTSGLCNRLQRDNQCL
EDGVLLGDSGYPLRPFLMTPFMNADTPAKERYQLAHTRTRVCIERAFGRLKRRFHVLQSE
IRLSPDKACRIATACAILHNVAVMFNMPEVDDVDVIQNIDNNVQDDVE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcgtaaagaaagtttcaggatggatccagtgctatatctccctttcccacct
ttattccttgttgtcctgattggcgttgtgattttgtgtgttttcctttggttacggtca
cctggaccatcttccaccaaaaatgaagaaaccataagaatggatccagtgctatatctc
cctttcttacctttattccttgttgtcattgttggcgttgtgactgtgtgtgttttcatt
cggatacgaccacctggtccaccttccaccgaaaatgaagaaaccataagacaaacacaa
caaaaggagaaagagattgaggatcgtacaagggaaagagctgaccttttagatacgatt
cgtgctcgggacagagaaatacagaaagctagggaaaaggaaagaaacctgcgaatgaaa
attgagaaactggaggaggaatatgatcgaatgaaactggaggaacttgcaataaggatg
gatgatgaccgaaaaaaacatgtggtggaaatggaagagtacacggtcaaagctgtccaa
gtatcgtttacaaatgatggcgtagcatttttggaggacatcttgaatgatgacataaaa
agagaaactcaccggaacagggccctcagtgtgcgacagatggttcttataacccttcgg
ttcctcgccacagggccgtttttcagtgttgtaggagacagcatgggttaccacaaatca
acagtttctcgtgtggtaacccacgtgacggagattatttgcaaaagcatgaaacgattc
attgtatggccttccgacgaagagaagaacagagtgaagagcggatttttcacatcggca
ggcttccctcacgtagtggggtgcgttgacgggacacacatccgtatccaggccctttct
gttgatgagccagcttatgtcaaccgaaaaggctatcatagtatcaacatgcaggcagtt
tgcgatcatgaaggattgttcacaagtgtcaacgccagttggccgggctcgtgccatgat
tcacacgtgttcaggacatcagggctgtgcaacaggctacaacgagacaatcaatgtctg
gaagatggggtgcttcttggagatagtgggtatcctttacggccattcctcatgacgccg
tttatgaacgctgacactcctgccaaggagaggtaccagctagcccatactagaacccgg
gtttgcatagaaagggcctttggtaggctcaagcggcgcttccacgtgctgcaaagtgag
atcagactaagtccagacaaggcctgtcgcatagctacagcctgtgcaattttacataat
gtagcagtcatgtttaatatgccagaggtagatgatgtagatgtcatacaaaacattgat
aataatgtgcaggatgatgttgaataa
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