Mya arenaria (softshell): 128222471 Help Entry 128222471         CDS       T09995                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism maea  Mya arenaria (softshell) Pathway maea03030   DNA replication maea03410   Base excision repair maea03420   Nucleotide excision repair maea03430   Mismatch repair Brite KEGG Orthology (KO) [BR:maea00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     128222471    03410 Base excision repair     128222471    03420 Nucleotide excision repair     128222471    03430 Mismatch repair     128222471  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:maea03032]     128222471    03400 DNA repair and recombination proteins [BR:maea03400]     128222471 Enzymes [BR:maea01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      128222471     6.5.1.6  DNA ligase (ATP or NAD+)      128222471     6.5.1.7  DNA ligase (ATP, ADP or GTP)      128222471 DNA replication proteins [BR:maea03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     128222471  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      128222471 DNA repair and recombination proteins [BR:maea03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      128222471    NER (nucleotide excision repair)     Other NER factors      128222471    MMR (mismatch excision repair)     Other MMR factors      128222471 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  128222471 NCBI-ProteinID:  XP_052787449 LinkDB All DBs Position 2:45257692..45297418 Genome browser AA seq 1023 aa AA seqDB search MLSALIGGGKVNVVYRLCTAYSKTTTMQRSIASFFSSGPKKESGVKDKEPLKQKNVSPSK LDDSPIKGPARKRARVIESDEEEENSVGSAARDSQAKSPASKPACPSPENKHVAQRLEKI NEEKTERESQDSGVGLQSPVRSATVTPVKSPFPARKTARKSIGGSARKKIPSTINEGREE METDSPPTTQESTLVSIKTEPASTDTTEEMTKEITKDNTEGGNVSDNAVMDKEMSNSKAD EQEDEAMTAEDSMEEEEAPSGHQKKSKAGKGVDTPKGQKRKNSKKEETPKEKKTKTTTPT SKKKGKQSPVKVKEEPKSAVSSEDQKNTDSGTETTNVKTEQTDKKPAVNPFASMMGGAKV GGGQEDGYNPTKANYHPIDDACWKQGDKVPYLALAKTFEAIENVSARLKIIEILCNFFRS VIVLSPEELLPCVYLCLNKLAPAYAGVELGIGETVLMKAIAQSTGRSMDKIKADAQEKGD LGIVAESSRSTQRTMFQPAKLTVPAVFAKLKEIATMTGNSVMSKKIDKIKGMFVACRQSE ARYLIRSLGGKLRIGLAEQSVLTALGNAIYLTPPGQDFPPAVLNKGKGVNSETLKQRMEE AALTVKTTYCECPNYDAIIACILEHGLEELPKRCKLTPGVPLKPMLAHPTKGISEVLTRF EGNDFTCEYKYDGERAQIHLLEGGEIHIYSRNSEDNTSKYPDIISRLPRCLKKGVTTCVL DCEAVAWDAEKQQILPFQVLTTRKRKDADASEIKVQVCVYAFDLLYHNGESLVREPLRRR RQLLRDSFQEVAGEFVFATSMVSSNTEEISEFLEESIKGNCEGLMVKTLDVDATYEIAKR SHNWLKVKKDYLEGVGDTLDVLVMGAYLGTGKRTGRYGGFLLGCYDEENEEYQCICKIGT GFKDEDLEQHSTFFKDHVIAKPKSYYKWDKSVECDHWFEPVQVWEIKAADLSISPVHKAA AGMVDPEKGISLRFPRFLRIRDDKKPEEATQATQVAEMYRGQSQIQNQKENKSAKPGDEE DFY NT seq 3072 nt NT seq  +upstreamnt  +downstreamnt atgctttctgccctgataggtggcgggaaagtaaatgttgtttaccgtttgtgtacagcc tacagtaaaaccactacaatgcagcgatcaatagcgtcatttttctcatcaggtccaaag aaggaatctggtgtcaaagacaaggaacccttgaaacagaagaatgtgtcgccatcaaag ctagatgactcaccaataaagggccctgcaagaaaacgagcccgtgtcatagagagtgat gaggaggaagaaaacagtgttgggtctgctgcccgcgactcccaggcaaagtcacctgca agtaaacccgcctgcccatctcctgaaaacaagcatgttgcacagaggcttgaaaaaatt aatgaagaaaagacagagagagaaagccaggactctggggtggggttacagtctccagtg agatcagccacagtcacacctgtcaagtcacccttccccgccaggaaaacagcccgtaag agtataggaggaagcgctcggaaaaagattccaagtacgatcaacgagggtcgtgaggag atggagacagactcaccaccgacaacacaggagtcaacattagtttctataaagactgag ccagccagtacagatacaaccgaggaaatgaccaaggaaattaccaaagacaacacagag ggaggcaatgtctcggataacgctgtcatggacaaggagatgtcaaacagcaaggcagat gagcaggaggatgaagccatgacggcagaagacagtatggaggaggaagaggcaccatca ggccaccagaagaagagcaaggccggtaaaggagtggacacaccaaaaggccagaagaga aagaacagtaaaaaggaggaaactccaaaagagaaaaagacaaaaacaactactccaaca tcaaaaaagaaaggtaaacagagccctgtgaaagtgaaagaggagcccaagtctgcggtg agctcagaggatcagaaaaatacagacagtggcacggagacaacaaatgtcaaaacagaa cagacagacaaaaagcctgctgtgaatccatttgccagcatgatgggtggggcaaaggtg gggggtggacaggaggatgggtacaacccaaccaaggccaactaccaccccatagacgat gcttgctggaaacaaggagacaaagtaccatatttggcgctggctaagacttttgaagct atagaaaacgtttcagctaggttgaaaatcatagagattctgtgcaactttttccgttcg gtgattgtgttgtcgccagaggagctgttgccatgtgtgtacttgtgcctgaacaagctg gcaccagcgtatgcaggggttgagctggggattggggaaacagtgcttatgaaggccatt gcgcagagcacaggtcggagtatggacaaaatcaaggcagatgcccaggagaagggagac ctgggtattgtagctgagagtagtcgaagcacccagaggacgatgttccagcccgccaag ctcactgtacccgctgtttttgctaaactaaaggaaatagctaccatgaccggaaattct gtgatgagtaagaagatagataagatcaaggggatgtttgtggcgtgtcgccagtcagaa gcccgctacctcatccgatccctgggaggcaaactgcggattggccttgcagaacagagc gtgctcaccgcccttggcaacgccatttacctcacacctcctggacaggacttccctccc gccgtgctgaacaaagggaagggagttaactctgagacccttaaacagaggatggaggag gctgctctcaccgtcaaaactacctactgtgagtgtccaaactatgatgccattattgcg tgtatccttgaacatggtctggaggagctgccaaagagatgtaaactcacaccaggcgtt ccacttaagccaatgttggctcatccaacgaagggcatcagtgaggttctgacgaggttt gaaggcaatgattttacctgtgaatacaagtatgacggagagagagctcagatccatctg ttggagggtggggagattcacatctacagtcggaactcagaggacaacacaagcaaatac cccgatatcatctcccggctaccccgctgccttaagaagggggtcacaacatgtgtactt gactgcgaggccgttgcctgggacgcagagaaacaacagatccttcccttccaggtcctc accacccgaaagaggaaggatgcagatgcgtcagagatcaaggttcaggtttgtgtatac gcgtttgacctgctctaccataacggtgagtcactggtgcgtgaacccctgcgtcgacgc cgtcagctgctgcgggactccttccaggaagtggcaggagagtttgtattcgcaacgtcc atggtgtcctccaacacagaggagatatcagagttcctagaggaatccatcaaaggaaac tgtgagggcttgatggtgaaaaccctggatgttgatgccacatatgagatcgccaagagg tcccataactggctcaaggttaagaaggattacctggagggtgtgggtgacaccctggac gtgcttgtgatgggagcctacctgggcacaggaaagaggacagggcgttatgggggattc ctcctcggttgctacgacgaggaaaacgaggagtaccagtgcatatgcaagattggtaca gggttcaaggacgaggaccttgaacagcactctacattcttcaaggaccatgtgatagcg aagcccaagtcttactacaagtgggacaagtctgtggagtgtgaccattggttcgagcca gtacaggtgtgggagatcaaggccgccgacctctccatctcccctgtacacaaggccgca gctggaatggttgaccctgagaaggggatctctttgcggttcccaagatttctgaggatc agggatgacaagaagccagaggaggccacacaggcgacacaggtagcggagatgtaccgc gggcaatcacagattcagaaccagaaggaaaacaagtcagccaaacctggcgatgaagaa gacttctactga

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