Mya arenaria (softshell): 128223699
Help
Entry
128223699 CDS
T09995
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128223699
Enzymes [BR:
maea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
128223699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
Motif
Other DBs
NCBI-GeneID:
128223699
NCBI-ProteinID:
XP_052788975
LinkDB
All DBs
Position
17:46092547..46150916
Genome browser
AA seq
680 aa
AA seq
DB search
MEGAGRPHGPACSAISVAMLVRAKTRPGETVCLVGDSPELGTWDPHRAIILRQETKKLIH
TDSEACFEECSEDGDIWSKTLQLEGFKTHYYRYFICRLFQSDSEDDGGRSVLVKWWEGHI
KPRRFSPKEAMSETEEGAEKMLDVFGNFDGIRSINRGWLIDQVEVQLQLHGEPLAFWKPK
YSGQTYSIKCTPIDHSYKKTLDDKYEMEMLGDSLPECHKTELLVSVLEKGRSKPRPQSKF
GPVVQQNSFVTFHAQTSDPESLGFQLDLYVDEDNKENETARHVGSSFILPLSMKKSRGSK
NIPINGNNNRPIGQLTYTYLLIKPMYGPNTRISMERTFQRYWKSTRKPVDVGHRGLGSSY
KCKKLAIVQENTIRSFQTAANHGADFVEFDVHLTKDEIPIIYHDFKVLITYRKKKREDLE
LFEIPVKDITFAELQQMKLSHPASTPEYKYEGIQDDDVEPEDTQPFPSLEQVFRSVDIHT
GFNIEIKYPQAKVDGSGKIKDYFDLNRFVDIILSDVFKNHGGRRIVFSSFEPDICSMLRL
KQNVFPVLFLSQADTSRYVPYAGIRTQSVVMATEFALSAGLLGVDVISDMLVKDMSQIRY
VKDAGLVLFVWGEGCNDKEFIIQLKENKVDGIIYDRIDFYKTGPKESIFKLEEKQKRHLL
ETLGSLTITEESLDSGTDSP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcggggcgaccacatggccccgcctgttctgctatcagtgttgcaatgctg
gttcgtgcgaaaacccgccctggtgagacggtgtgcctggtgggggactccccggagctg
ggaacatgggatccacaccgggccattatattgaggcaagaaactaagaagctcatacac
acagacagtgaggcatgcttcgaggagtgctctgaagatggtgacatctggtcaaagacg
cttcaacttgagggtttcaaaacccactactatcgctatttcatctgccgactcttccag
tctgatagcgaagatgacggaggtcggagcgttcttgtgaagtggtgggagggccatata
aagccacgcaggttttcaccaaaagaggccatgtcggaaactgaggaaggtgcggaaaaa
atgttagacgtgtttggaaactttgatggtataaggtcgatcaaccgtggctggctgatt
gaccaagttgaggtgcagttacagttacatggtgaaccactcgccttctggaagcctaaa
tactccggtcagacctacagcatcaaatgtacacccatagatcatagttacaagaagaca
ctggatgacaagtatgagatggaaatgttgggggactcactgccagaatgtcacaagaca
gaactgctggtctctgttttggagaagggaagatccaagccccgaccccaatccaagttt
ggtccagtggtccagcaaaactcttttgtaaccttccatgctcagacatcagacccagag
tccctgggtttccagctagacctatatgtagatgaggataacaaagaaaacgagacagcc
aggcatgttgggtcaagttttatcttgcccctcagtatgaagaaatctcggggctcaaag
aatataccgattaatgggaacaataataggcccatcggacagcttacatatacgtacctc
ctcataaagccaatgtatggaccaaatacaaggattagtatggagcgcacctttcaacgt
tactggaagtccacacgtaaaccagtcgatgttgggcacaggggacttgggtcatcatat
aagtgcaaaaaattagccattgtgcaggaaaatacaataagatcattccagacagcagcc
aaccatggagcagactttgtggagtttgatgtccacctcaccaaggatgaaataccaatt
atctaccacgatttcaaggtgctgattacctaccgaaagaaaaagcgtgaagacctggaa
ctgtttgagattccggtaaaggacatcacgtttgctgaactccaacaaatgaagttgtca
caccctgcctccacaccagagtataaatatgagggaatacaggacgatgatgttgaacca
gaggacacccaaccattcccgtctcttgaacaagtcttccgctcagttgatatacatacg
ggcttcaacatcgagatcaagtacccgcaagctaaagtggatggctctgggaagatcaag
gactattttgacttgaatcgtttcgtggacatcattttgtccgacgtcttcaaaaaccat
ggtggacgaaggattgtgttttccagctttgagccagatatctgttccatgttacgactg
aagcagaacgtgtttccggtgttgtttctttcccaggccgatacttcgagatatgttccg
tatgctggaattcgtacacagtctgttgtcatggcaactgagtttgctcttagtgctgga
ctgctgggtgttgatgtcatatcagacatgctagtgaaggacatgtcacagattcggtac
gtgaaggatgcgggactggtgctgtttgtctggggagagggctgtaatgacaaggaattc
attatacaactcaaggagaacaaagttgatggaatcatctatgacagaattgacttctac
aagaccggccccaaggagagtatctttaagctggaggagaagcagaagcgacatctgctg
gagactctaggctccctgaccattactgaagaatcactcgactctgggactgactctcct
tga
DBGET
integrated database retrieval system
