Mya arenaria (softshell): 128223833
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Entry
128223833 CDS
T09995
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128223833
Membrane trafficking [BR:
maea04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128223833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
128223833
NCBI-ProteinID:
XP_052789211
LinkDB
All DBs
Position
17:52937251..52978960
Genome browser
AA seq
1623 aa
AA seq
DB search
MALGPDLAQLSRHLRQERLYVTSEREQLQSLYEQVKTAAEQLYHQSWIGRQQKTFLDLLV
SASQQVTPTECCAKTSQLEATNFIDSYKQLSYHDSKYGEFLKYILDNPVFIGTVIAIAEK
SNVPNVADVIKTLVRSVFGNCILQEDETAMLHVLKSLLELQLSSSVDPRRLLRRGSCAFS
VAFKQLFDMVFSAKLFLTAALHDPVMRLLMEDEWFYDIDPGKALVRFPPAERLRRFGEPG
TDQYKEKLVKYRTTIVDKLVLMANRFITSIKNNMHCFPQSLGWIVSQVYQVLAKSGKAEM
GEVRSVCADLVFALFICPAICDPEPHGITTDVPISHIARHNLMQMAQIIQVLAISQWEEI
DPKLHDLYGKFEKGCMSTLLDSLLDGIGMELPSVTSSQLPCLSRTSSLITLRGLNQLVTF
MRAALPFVEDSSDRKALDEMLAGLVPITPVTPVMPPQGMLPCASTPPGTPSTAKKMKGKK
KPVLGNQMPDDAVSVSSVTIETEALPSNAVEEVLVISLGNDQDCPGMMSEQKVMVCEQEN
KRRRVKHQTVQWDYEGPPGEIQEKRTRFSLSHDQESIGEGNTSDIPEGMSEDASSHSVGS
QDLENEDDNDDNFSDMISANVSGRGTPNISGRDTPLSQAEMEQEHVHVPPIQPALPETVR
KKNREDVTDKFGKFDIKPELDYDLKSTVSDTWSTDVLASDSEPPEMPQQVRLEEIAEEMS
RQFLTTGENVPGLSKAPSEAWSMDVMPSDTEDKQCETFSELDDMSVGGGGSNLDDVRSEP
DTTDGNEITPLASGFQSPTDTAPVDIFSTGRAGRQGTSINSDNISMSPTFSDSVFSDIDV
ESGRNSREPRAISGPAQGNMQFPSIDSNKLFVPIKKKRGQSPSGSSPDRNSETGSTRNRL
VDFDLEPRYESYQHRPASDTGILNGARPKQIFNDRNRNHKNVVSNFKTKDSSYRFNGVNS
VNLIPDEIRPISNDSGVGSTQYIDAAPSDDVRILEQQNTNVDETRFSAALSLFDPLAEGE
GLGGGDLLEGPSSPHERSPFQGFSNPNFVEVATNAILPNSRGKNKSDNADLPSRTKEQAQ
SATLIDTGDVFLQTDGPPKPRRGSTDSNRSSGSSLSKDGSNSGDRASLQNEKELSGEQDG
ATPGKKRGLFRTFREKIHKVVDVTQQTAAESTNTLVDSEGAVGGDTTDKAAPEPNIVITE
TSDDILAKYRKKSILTSAPSSEPAQSERALRLTLKENDDSTPLYDPDNLEKCLAFLDAKR
KLRIVLGSADFQQVGYSLFCQPSVPYSPREVSSTRDNDLVNMLRAQLSEAINLQNKDTIA
QLHEALRCVRQFDNEGCKKLVRSLQEDYRTRASYISYLVRCKQGLLCTLSHLRKLQDRAR
REKEIYNKHMTSVCIRMFLETWEKALQGFIQDFQKLTMADEKVDLLERFLQYLYQKMNVD
SIWLAANESQLEDGQLAIERYIMSRIYTHAMFPNGDGDIHRDQLFQAHIKELSKMITPEH
KDLTIPKMYHLECPWPAAQRELYMINAYKTPRDKLYCIQRCATTIMNLLSMANEKSVPAA
DEFTPVFIFVIIKANPPCLLSTIQYVTSLYQDRLQGEEQYWWMQFVAAVEFIKTMDYPRD
SSA
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggctctaggccctgacctggcgcagctgtctaggcatctgcgacaagagaggctgtat
gtcacatctgagagggaacagctacagagtctctatgagcaggtgaaaactgctgcagaa
cagctttaccatcagtcttggattggtcgtcaacagaagacattccttgatctgcttgtg
tctgcatcccaacaagtcacgcccacagagtgttgtgccaagacgagccagcttgaagct
acaaacttcatagatagctacaaacagctgagctatcatgattcaaagtatggagagttc
ttgaaatatatcttggataatccggtcttcattggcacagtgatagccattgctgagaaa
agcaatgttccaaatgtggctgatgtcataaagacattggtacggtcggtttttggtaac
tgcatcttacaagaagatgaaacagcaatgttacatgtgctgaaaagtttgttagagtta
caattgtcatcaagtgttgatccaagaagactgttgagacgaggctcatgtgcatttagt
gtagcatttaaacaactgtttgacatggtgttctctgccaaattattcctgaccgccgcg
ttacatgaccccgttatgagacttttgatggaggatgagtggttctatgacatcgaccca
gggaaagcactcgttcgcttcccaccagcagagcggctgcgaaggtttggagagccgggt
accgaccaatacaaagagaagttggtgaaatatcggacaactattgtagacaaactggtg
cttatggcgaataggtttatcacgtccatcaagaacaatatgcactgctttcctcagagt
cttggctggattgtgtctcaggtgtatcaagtgctggccaagtcgggtaaagctgagatg
ggtgaggtgagatcggtttgtgccgaccttgtgtttgccctgttcatctgtcctgcaata
tgtgaccccgaaccacatggcattaccacagatgtgcccatcagccatatagcgcgccac
aacctgatgcagatggcccagattatccaggtattggcaatatcccagtgggaagagatt
gaccccaaactgcatgacctctatggcaaatttgaaaagggttgtatgtcgacactgcta
gactctctgctggacggtattggcatggagttaccatctgtgacctcgtctcagcttccg
tgtctgtcacgaacatctagtctcatcacactcagagggctaaaccagctggtaacattt
atgagagcagccctaccatttgtagaggacagctcagacaggaaggccctagatgagatg
ttagctgggcttgtccctataaccccggtgacccctgttatgccccctcaggggatgctg
ccatgcgcctcgaccccaccagggacacctagcactgccaaaaaaatgaaaggaaagaaa
aagcctgtcttaggaaaccaaatgccagacgatgcagttagtgtgtcttctgttaccata
gaaacagaagcgttgcctagtaatgcagtggaagaggtgctagttatttcccttggtaac
gaccaggactgcccgggcatgatgtcagaacagaaggtgatggtatgtgaacaagagaac
aagcgacgccgggtgaagcaccagactgttcagtgggattacgagggtccgccaggggag
atacaagaaaagaggacacgcttctcactgtcccatgatcaggagtcaattggtgaaggt
aacacaagtgacatccctgaaggcatgtctgaggatgccagtagccactctgtcggctcc
caggacctggagaacgaggatgacaatgatgacaacttctccgacatgatttctgccaat
gtcagtggtcgcgggaccccaaacatcagtggtagagatactcctctctcgcaggccgag
atggagcaggaacatgtgcatgtacccccgatccagcccgcgctgccagagaccgtacgc
aagaagaacagagaggatgttacagacaagttcggcaagttcgacatcaagccagaactt
gattatgatctgaaatccaccgtcagtgacacatggagtacagatgtcttggccagtgac
tctgaaccacctgagatgccacagcaggtgcgacttgaagaaatagctgaggaaatgagc
agacaatttctcactactggagagaatgttccgggcttgtcaaaggcacccagtgaggct
tggagtatggacgtaatgccatctgatacagaagacaagcagtgcgagacgttctcagag
cttgacgacatgtcagtgggcgggggagggagtaaccttgacgatgtgcgaagtgagcct
gacaccacagatggaaatgagattactccccttgcttcaggtttccagagcccaactgac
actgctccggtcgatattttctcaacaggccgtgcaggtcggcagggaacatcgataaac
tctgacaacatcagcatgtccccaacgttctctgatagtgtcttttccgatattgatgtt
gaaagcggaagaaacagtcgtgagcctcgagcaataagtggccctgcgcagggaaatatg
cagtttccctctattgactctaataaattatttgtgccaatcaagaaaaaacgtggacaa
tcaccgtccggttcatctccagatcggaatagtgaaacagggtcaaccagaaatcgattg
gtcgattttgacttagagcctcgttatgagagttatcagcacaggcctgcgagtgatact
gggattttgaatggtgctaggccaaaacaaatttttaatgataggaataggaatcataaa
aatgttgtgtcaaattttaaaacgaaggatagtagttatagatttaatggggtcaatagt
gttaatttaattcctgatgaaattaggccaatatccaatgattccggtgtagggtctaca
caatatatagatgcggcaccaagtgatgatgtgcgaatattagaacaacagaacacaaat
gtcgatgaaacccgattttccgccgctttaagtttatttgacccgttagcagagggggaa
ggattaggaggtggggatttactagagggtccaagcagcccacatgaacggtcccccttt
caaggtttttccaatccaaactttgtagaagttgccacaaatgcaatactgcccaacagc
cgaggcaaaaacaaaagtgataatgcagatcttcctagtcggaccaaggaacaggcccaa
agtgctacattaatagacactggggatgtgtttttacaaaccgatgggccaccaaaacca
agaaggggtagtactgatagtaatcggtcgtcggggtctagtctatctaaggatgggtca
aattcaggggacagggccagccttcagaatgaaaaggaattatccggggaacaagacggt
gccactccagggaagaaacgagggttgttcaggacatttagggaaaaaattcataaagtg
gtggatgtcacccagcagactgcagcagagagtaccaacacgcttgtagatagtgagggg
gctgttggtggggatacaacagacaaggctgcacccgagcccaacattgtcatcactgag
acttcagatgacattttggccaagtatcgcaaaaagtcaatcctgacgagtgcgcccagc
tcagagcccgcccagtcggagagagcccttcgcctaactctgaaggagaatgatgactct
acccctctgtacgatccagacaacctggagaaatgtcttgcattcctggacgccaagagg
aaactgaggattgtgcttggatctgctgacttccagcaggtgggatacagcctgttctgt
cagccaagtgtgccctacagtccccgggaagtgtcttctacacgtgataatgaccttgtc
aacatgctgagggcacagctgtctgaggcgattaatctacagaacaaagacaccatagca
cagctacatgaggctcttagatgcgtcaggcagtttgacaacgaagggtgtaagaagcta
gtcaggtccctccaggaggactatcgtaccagggcgagctacatttcctatctggtgagg
tgtaaacagggccttttgtgtaccctgtcacacctgagaaagcttcaggatagggccagg
cgggagaaagagatttacaacaagcacatgacgagtgtgtgcatccgtatgttcctagaa
acctgggagaaggcactgcaagggttcatacaggactttcagaagctgacaatggctgac
gagaaagtggacctgctggagaggtttctacagtatctgtaccagaagatgaacgttgat
tcaatctggcttgcagccaatgaaagccagctggaggacggtcaactagcaatagagcgt
tacattatgtctcgaatctacacccatgccatgtttcccaacggtgatggggacattcac
agggatcagttattccaagcgcatatcaaagagttaagtaagatgatcacgccagaacac
aaggatctgaccatacccaagatgtatcacctagaatgtccctggcccgctgcacagagg
gaactgtacatgatcaatgcttacaagacaccaagggataagctgtattgtattcagcgg
tgtgctacaaccatcatgaacctactgagtatggcaaacgagaaatcagtccctgctgct
gacgaatttacaccagtcttcatctttgtgataattaaagccaatcccccatgcctgctg
tcaactatacagtatgtaactagcctataccaggacagactgcagggagaggaacagtac
tggtggatgcagtttgtggctgctgtagagttcatcaaaaccatggactacccacgggat
agcagtgcatag
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