Mya arenaria (softshell): 128224227
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Entry
128224227 CDS
T09995
Name
(RefSeq) N-glycosylase/DNA lyase-like
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128224227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128224227
Enzymes [BR:
maea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128224227
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128224227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
128224227
NCBI-ProteinID:
XP_052789979
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All DBs
Position
17:54958127..54967275
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AA seq
394 aa
AA seq
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MSAPLSSTFLSFPCKIAEIRLDRALACGQNFRWKQTTQGEWTGVIGNAVWRLKQSETEIF
YQTFRNVHSTLPMIHPMHKFSSEDSLESCCKCVSNGKKSEDIMCNCQKTDLNILRDYLQL
NVSLENMYELWSESDENFRNVARTFTGIRMLRQDPIECLFSFICSSNNNISRITSMVEKL
ASNYGEKIMELDGQEYFSFPQVSSLAKDGVEERLRTLGFGYRAKYIQRSAEYIIGQGGEK
WLYDLREMDYPDAKASLLKLCGVGAKVADCVLLMCLDKPGAIPVDTHVWQIAARDYMPKL
KQAKSLTDTLYNEIGDHFRSLWGPYAGWAHSVLFTADLRQFQEPGSKKPMVPSPGKRRQT
MKMDKQPVKRSHYEETDEKPVTKISKKGKKKSNA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccttatcatccacttttctgagttttccgtgtaaaattgcggaaattcga
ttagacagagcccttgcatgtggccaaaacttcagatggaagcagacaacacaaggggaa
tggacaggggttattggcaatgcagtatggcgattgaagcagtctgaaacagagattttc
taccaaaccttccgcaacgttcactccacattgccaatgatacacccaatgcacaagttt
tcttcggaggacagcttagagagctgctgcaagtgtgtttcaaatggcaagaaatctgaa
gacattatgtgcaattgccaaaaaactgacttaaatattctaagagattacttacagctt
aatgtcagcttagaaaatatgtatgaactgtggtcagaaagtgacgaaaacttcagaaat
gttgcaagaacttttactggtattagaatgctaaggcaagacccgattgaatgcctcttt
tccttcatatgttcttctaataataacatttcacggataacatctatggtagaaaaactg
gcttctaattatggcgaaaaaatcatggaattagatggtcaggagtacttttcatttcca
caagtgtcgtcattggcaaaagatggggttgaagagcgtttaagaacccttgggtttgga
tacagagctaaatatatacagaggtctgctgaatacataataggacagggtggggaaaaa
tggctgtatgacttacgggaaatggactatccagatgcaaaggctagcctgctgaaattg
tgtggagttggggctaaggtagctgactgtgtgttactgatgtgtttggacaagccggga
gccattcctgtggacacccatgtatggcagatagctgcacgagattacatgccaaagctg
aagcaagcaaagtctctcactgatacactgtataatgagattggagatcacttcagaagt
ttatgggggccttatgctggatgggctcacagtgtactctttactgctgacctccgccag
ttccaagaacctggatcaaagaagccaatggtaccatcacctggtaaaagaagacagaca
atgaaaatggacaagcaaccagtcaaaagatcacactatgaagaaacagacgagaaacca
gtcacaaagatatcaaagaaaggaaagaaaaaatcaaacgcatga
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