Mya arenaria (softshell): 128224740
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Entry
128224740 CDS
T09995
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128224740
03041 Spliceosome [BR:
maea03041
]
128224740
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128224740
Spliceosome [BR:
maea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128224740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
128224740
NCBI-ProteinID:
XP_052790690
LinkDB
All DBs
Position
17:47254275..47281144
Genome browser
AA seq
699 aa
AA seq
DB search
MDPQAAFADAVARARQVSLNIAAKINQPGQPGSGDGIGSGKRPLDADPINFDEPEAKRSP
FLQDPAGSYSGLNQPRNTEAAAAAAQAAARINQQLGVSSPGGGGNMQSGGGDQMGLGMVI
TEEFKVPDRMVGLIIGKGGEQITRLQAETSCKIQIAPDSAGMPDRSTTLTGTPQSIGKVK
DEINKIIQRAQGTEQGHFGMGGGGGGGGEMSGNIEIMVPGNKVGLVIGKSGETIKQLQEK
CGVKMVMIQDSNTPSAYEKPLRISGDQMKCQRAKEMVMELLASKDDNMDGGYSNGGGMGG
FGRGGIDIPVPRAAVGIVIGKGGEMIKKIQQETGAKVQFKQDDGQSEDRLCSISGPPDKV
QAAQSMIQDLLNNSNQYGDGMGRGGGFRGGRGGGRGGFNQGPGRGMGGYNDGFQDQTSFA
VPADKCGLVIGKGGETIKNINSTSGAHVELQRNPGPNPNEKNFNIRGEPSQIQHAIQMIC
EKAGLPYDGPGGDFDNMMDENDDGPGGDMFQGGPGGPGGPGGPGGPPPGGPGGPYGGPGP
QGPGYDQYGNPQGGPGPNQSGYGGAPQGWGGNYNQQFPGQGQQQGAPGAGDPSKGQDPNA
AAWAAYYAQYYAQYGQQGAAAGGFGQQPQQPQQPMQQSTPQPSAAINPQTGQPDYSQAWA
EYYRQQGMYQQANAILAQHQQQQGGGSAAPGGQGGQPQQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggacccacaggctgcctttgctgacgctgttgctagagctagacaggtatcattgaat
atcgccgctaaaatcaatcaaccaggacagccgggttcaggggatggtataggatcaggt
aaaagaccattagacgctgatccaatcaattttgacgaaccagaagcaaaaaggagccca
tttctacaagatcctgcaggcagctactcaggacttaatcaaccaagaaacacagaagca
gcggcggcagcagcccaagcagcagctagaatcaaccagcagttaggtgtgtcatcccca
gggggaggaggaaacatgcagtcaggtggtggagatcagatgggcctgggaatggtcatc
actgaggaatttaaggtgccggacaggatggtcggattgatcatcggcaaaggtggggag
cagatcacaagactccaggcggagacaagctgtaaaatacagattgccccagacagtgct
ggcatgcctgatcggtcaacaacactcaccggcactccacagtctattggcaaggtgaag
gatgaaatcaacaagatcatccagcgtgctcagggcacagaacagggtcactttggcatg
ggtggcggtggaggtggtggtggggagatgtcgggtaacatcgagatcatggtccctggg
aacaaggtcggccttgtgattggcaagagcggtgaaaccatcaaacaactacaggaaaaa
tgtggtgtaaagatggtgatgatccaggacagtaacacgccctcggcatatgagaagcct
ctccgtatctctggcgaccagatgaagtgtcagcgggccaaggagatggttatggagctc
ttggcctccaaggacgataacatggatggtggctattccaacggaggaggtatgggagga
ttcggtcggggtggtatcgacattccggttccccgtgccgcagtgggcatcgtgattggc
aagggtggagagatgattaagaagatacagcaagagacaggtgccaaggtccaatttaaa
caggacgatggtcagtctgaggaccggctttgttctatatctggccctccagacaaggtg
caagctgcccagtccatgatccaggacctgctcaataactctaatcagtatggtgacggt
atgggccgaggtggtggattcagagggggtcgtggtgggggccgtggtggattcaaccaa
ggtccgggcaggggcatgggaggttataatgacgggttccaagaccagaccagctttgct
gtccctgctgacaagtgtggccttgttattggcaaaggtggggagactattaagaacatc
aacagcacatccggagcccatgtagagctccagagaaacccaggacccaacccgaacgag
aagaacttcaacatccgtggggagcctagtcagatccaacatgccatacagatgatctgt
gaaaaagctggtctgccctatgacggtcctggtggtgactttgacaatatgatggacgaa
aatgatgatggtccaggcggtgacatgttccagggagggccaggtggtcctggcggtcct
ggtgggccaggaggtccacccccaggagggccgggaggaccatatggtggtcccggaccc
cagggccccggatatgatcaatatggcaacccacagggagggccagggcctaaccagtct
ggttatggtggagctccacagggctggggcggtaactacaaccagcagttccccggacag
ggtcaacagcaaggggcaccaggagcaggagatccaagcaagggtcaagatccaaatgct
gcagcttgggcagcctactatgcccaatactatgcgcagtacggacagcagggggcagca
gctggaggattcggtcaacagccccagcagcctcaacaaccaatgcagcagtccactcct
caacccagtgcagccatcaatccccagacaggtcagcccgactactcccaggcatgggcc
gagtactacagacaacagggcatgtaccagcaggccaacgctatccttgcccagcatcag
caacaacaagggggtggtagtgccgctcccggtggccagggaggacaacctcaacagtag
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