Mya arenaria (softshell): 128226048
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Entry
128226048 CDS
T09995
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
maea
Mya arenaria (softshell)
Pathway
maea03030
DNA replication
maea03410
Base excision repair
maea03420
Nucleotide excision repair
maea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128226048
03410 Base excision repair
128226048
03420 Nucleotide excision repair
128226048
03430 Mismatch repair
128226048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128226048
03036 Chromosome and associated proteins [BR:
maea03036
]
128226048
03400 DNA repair and recombination proteins [BR:
maea03400
]
128226048
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128226048
DNA Replication Termination Factors
ELG1-RFC complex
128226048
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128226048
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128226048
Check point factors
HRAD17(Rad24)-RFC complex
128226048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA
AAA_16
Sigma54_activ_2
AAA_22
ATPgrasp_ST
ABC_tran
Rad17
nSTAND6
SLFN-g3_helicase
AAA_5
Motif
Other DBs
NCBI-GeneID:
128226048
NCBI-ProteinID:
XP_052791906
LinkDB
All DBs
Position
3:44762355..44771153
Genome browser
AA seq
484 aa
AA seq
DB search
MVPLTIVDGSFDDRVLLRELMVPLTIVDGSFDDRVLLRELMVPLTIADGSFDDRVLFREL
MVPLTIVDGSFDDRILFRELMIPLTIVDGSFDDRILLRELMIPLTIVDGSFDDRILLREL
MIPLTIVDGSFDDRILLRELLASLTSVLMRFVTASLKKVAGGDFPHLLVYGPSGAGKKTR
IMCILKELYGSGVEKLRIEQHHFTTPSKKKLEISTISSNYHIEVNPSDVGNNDRVVIQEL
IKTVAQVNQLESSTQRDFKVVVLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKV
IPAIKSRCLGIRVAAPSLDEVCQILQIVCKKEGLNLPMELAKRIAEKSNRNLRRALLMCE
ACRVQHYPFTADQAVSEPDWEVYLRDTAHMIVQQQSPKRLFEVRGRLYELLTHCIPADII
MKGLLQNLINSCDGELKTEVIQTAAYYEHRLQLGQKAIYHLEAFVAKFMAIYKRFLEEGI
ADIF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggttcctttgacgatagtagatggctcctttgacgaccgtgtattgctccgtgaactg
atggttcctttgacgatagtagatggctcctttgacgaccgtgtattgctccgtgaactg
atggttcctttgacgatagcagatggctcctttgacgaccgtgtattgttccgtgaacta
atggttcctttgacgatagtagatggctcctttgacgaccgtatattgttccgtgaactg
atgattcctttgacgatagtagatggctcctttgacgaccgtatattgctccgtgaactg
atgattcctttgacgatagtagatggctcctttgacgaccgtatattgctccgtgaactg
atgattcctttgacgatagtagatggctcctttgacgaccgtatattgctccgtgaactg
ctggcttctttaacctccgttttgatgcggtttgtgactgcgtcacttaagaaggtcgct
ggaggtgacttcccccatctgttagtgtatggtccatcaggggctggaaagaagacgagg
atcatgtgtattttgaaagaactgtatgggtctggagtggagaaactccgcattgaacaa
catcactttaccactccatctaagaagaagctggaaatctcaacaatatccagtaactac
cacattgaagttaatccgagtgatgttggtaataatgatcgcgtagtgattcaggaactc
atcaagactgtggctcaggttaatcagctggaatcttctacacagagggactttaaagtg
gttgtgctgacagaggttgaccgtctgacaaaggacgcccaacacgcccttcgtcgtacc
atggagaagtacatggccacctgtcgcctcatcttgtgctgtaattccaccagtaaggtt
atccctgccattaagagcaggtgtctgggcattcgcgttgctgcgccttcattggatgag
gtgtgtcagatcctacagattgtttgtaagaaggaaggtctgaatctccctatggaacta
gcaaagagaatcgcagagaagagcaaccgtaatctcagacgagcacttctcatgtgtgag
gcctgcagagttcaacactaccctttcaccgctgaccaggcagtgagtgaaccagactgg
gaggtctatctgcgcgacactgcacacatgatcgttcaacaacagagtcctaaaagactg
tttgaagtgagaggtcgactttacgagttgctcacccactgtattccagctgacatcatt
atgaagggcttattacaaaacttgatcaacagctgtgatggtgagctgaagacagaggtg
attcagacagcagcgtactatgagcaccgtctacagcttggtcagaaggccatctaccat
cttgaggcatttgtagccaagtttatggccatctataaacgtttccttgaggaaggcata
gcagacattttctga
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