Mya arenaria (softshell): 128226182
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Entry
128226182 CDS
T09995
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128226182
04091 Lectins [BR:
maea04091
]
128226182
Ion channels [BR:
maea04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128226182
Lectins [BR:
maea04091
]
C-Type lectins
Others
128226182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
REJ
PLAT
GPS
Ion_trans
GPR128_GAIN_subdomA
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
128226182
NCBI-ProteinID:
XP_052792033
LinkDB
All DBs
Position
3:62506107..62539926
Genome browser
AA seq
1864 aa
AA seq
DB search
MDIGSNKCSADTWHFDSVNNSCTPSECLNLKDPNNCFLSQAVCENACSGEKVSLQIRCSS
NCDDEANPQEEVKLYLDCVECNSTVVTVTWRVFSCPDGPTSCEDDPEFVHIGGMVYTLDP
SDEHIVNSTQFRVTATGRLLTDEVGSAAQLVKYSPMPVAGTCAVSPNIGYSLITDFNITC
NGFLAGNHSLTYTMTAIKNANNNRIYQVYRGPYSHVEGIKLANGRKKLDFMLEVEVKAAL
SNGAAVSFSTYVQVYRSGASPVQMKSADVVKGLIDVTNTGQDSALATLVNNGDTDGAVEL
MDDIMSTVNEDTGPETEDRALIRTAVVDTLAGVMGNETSTDEVNQIAGVLSKITQAPAEL
TEETQDVAAEVAQELALSFDTQSSSVSSAEVVETAGLILSSVSQLLDVKTDTGQVQMKNT
TSSTERLLGVIDILSKTLITKQVLGTASTNMYTDSLTLGVSKVDSAGLGSEELSIGLKTQ
SITAGVKLSPAIDLGLLSEAGLQLVYMEKNPYVWDDSATSVKGPVVSIELKDDTSSPILV
KNLLQPITVNIPTQNVEIENSTLVLNLVKDGNNVTFDFDQANILTFNFTIQPGQTTVLSI
DTVTNISNLLLYITDKGKPTLDDIQLFGFKYPEMAYVHAQDFSSFNLSANIDWNELQDSK
LIFFTYNSSALENATGEFNVGVSVDLNDNLTLGQLSGVAPECLGQGEGVACQARVELHLH
IYTHSLTCKYWNKHAQAWLHDGCEVSPGSSPSMLQCLCNHMTAFSGGVFVLPNFVDPIAD
AALFLTFFDNPIVVTTVIIVWILYFFVIHWARRADKQDQELAGVLLCGEENQHYLYLVCV
VTGWWTSAGTTANVFFSITGSEQSSPKRRLTTSVRPCFQTGYEDWFIFTTENSLGDLKEL
CLWHDNTGTSPHWYLSHVYIKDLQAGSSWTFIYKDWLAVDRGSLLHTSATVTATSQTELR
KKRQHNFMVKTSQDLRDGHLWISIFSKRARSTFTRVQRLTCALSLLLTTMLTNIMFYGVS
TDDPSDQVGAAGGWVISLSAIVIGIESSLIMFPVNLLVLQLFLKLKSRPTEAEVRATSRR
YKERAGFIDRLMDAGQEMAEQVTEKLSSMIHGFATQSEELEFEDAKSSLDIPCAHVQPDV
ESAGHRGIPDIQVGSDSTMDIFESTNSFLPTIQEVDETQADAVISPSMSPGDFGLADTEM
AENTGSKTTFPKIRVTSESKNNGKFLPWWFLYVAWVLVLMVSLVSSYFVMLYGLKYGYQR
SLEWLVSFLTGFTQSAFLTQPLKVFAIAMVLTLLFKKTVEFDDFGPEISIDEDEKYVNGV
CELPEVNIPYNKPLSESLLKQIKDRIKLEWLMDMTLRDLLLYFVYLGVLLVVVHGHREVR
TAYLNTLALEDVLVNPGCVNTNLCFFLEKVNKVETFYQYLHEVAIPSLADMSEADHEFAT
PGSSHFLLGPWRIRQTRVTKDSCYSGAERIVERFGMRVDCSGEYWLGLEETGDYNSSWAH
RLPKGSGAGTWWGYQSAWQLKTLPITGSLATYYGGGYVITMPADTTLHAGIVEEMWNSDW
LDEHTRAVMIEFTLYNPNADLFSPMVLLFEFSRSGAILPSHQFFSTNLFHYSTDFATFVA
VCEVMFLCFNISFTYFEWKKLKVLGRKAYFEDFWNYIELLQMGLSYSVVGLFFQRMLSVS
SALEEYGASGETTYISFTTAIFWNSVLNYVMAFLVGLVTLKSIKLLQFNKRTFMIFDTLN
HTKGMIGSFIMMAVLFTVAYASLGVLAFGTVQHGYREMFTSLMTVFNFALGVSDLPGLQG
TNRILGPAFFVSFVFLVQFCFMTIFVAILNFGISESKALFEKRKNKFELVEYVLSKIKTI
ADSS
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggacattggttctaataagtgctctgctgatacttggcattttgacagtgtaaacaac
tcgtgtacgccgtccgagtgtctcaacttgaaagaccctaacaactgcttcctctctcag
gccgtgtgtgaaaacgcatgctcaggagaaaaggtttctttgcaaataaggtgttcgtcc
aactgtgatgatgaggctaacccacaggaggaggtcaagctatacctggattgtgtggag
tgtaattccactgttgtcacggtcacatggcgggtcttctcatgcccagatggccccacc
tcctgtgaggatgaccctgagtttgtgcacattggtggaatggtttacaccttagaccca
tcggatgagcacattgtcaacagcacgcaatttagggtgacagcaacagggagactgtta
acagatgaggtaggcagtgcagcccagctggtgaagtacagccccatgcctgtggcgggc
acgtgtgcagtctcacccaatattggctactccctcatcacagactttaacatcacgtgc
aatggcttcttagctggaaaccattccctcacttataccatgacagctataaaaaatgcc
aataataatagaatttatcaggtgtacagaggcccctacagtcatgtggaggggatcaaa
cttgctaatggccgtaagaaattggacttcatgcttgaagtagaagtcaaggcagcactc
agcaacggggcagcagtctctttcagtacatatgtgcaggtatatcgatctggtgcctcg
ccggtgcagatgaaatctgctgatgttgttaagggcctgattgatgtgaccaacactgga
caggactccgctttggccacccttgtcaacaatggggacacagatggtgccgtggagttg
atggatgacataatgtccacagtgaatgaagatactggaccagagactgaagacagagca
ttgattcgtacagcggtggtggataccctagcaggagtaatgggcaatgagacgagtaca
gatgaggtcaatcagatagccggtgtcctgtccaagatcacacaggctcctgcagaactt
acagaagaaacacaggatgttgctgcagaagtggcacaagaacttgcactctcctttgat
acccagagcagctcggtgtcatccgctgaagtggttgaaacagcaggtttaatcctgtct
agtgtgagccaacttctggatgtgaagacagacactggtcaagttcagatgaagaacacc
actagcagcacagaacgtctgctgggagtgatagacatcctgagcaaaacactgataaca
aaacaggtccttggcacggccagcactaacatgtacacagacagcctcacccttggggtg
agcaaggtcgacagtgccgggctgggctccgaagagttgtccattgggctgaagacacag
agtattacagcaggggtcaagctgtcacctgctatagacttagggctactttcagaggct
gggctccagttggtgtacatggagaagaacccgtatgtgtgggacgatagtgccacatca
gtgaaaggccctgtggtgtccatagagttaaaggatgacacaagcagtccaatccttgtt
aaaaatcttctccagcctatcactgtcaacatacccactcaaaacgttgagattgaaaac
agcactttggttttaaatttggtgaaggacggaaacaatgtgacatttgactttgaccag
gcaaatatcctcaccttcaacttcacaattcagccaggtcaaacaacggtgctttccatt
gacacagtgaccaacatttccaacctactgctctacatcactgacaagggcaaacccaca
ctggatgacatacagttgtttggctttaagtaccctgagatggcttatgtgcacgcccag
gacttctccagttttaatttatcagcaaacattgattggaatgagttacaggactctaag
ttgatcttcttcacctacaacagttccgccttagaaaatgctactggggagtttaatgtg
ggagtaagtgttgacctaaatgacaatttgacgctggggcagctgtctggtgtggctcct
gaatgcttggggcaaggggagggggtggcatgtcaggccagggtagagctccacctccac
atatacacacacagtctaacctgcaagtattggaacaaacacgcacaggcatggctacat
gatggttgtgaggtttctcccggaagctctcccagtatgctgcagtgcctgtgtaatcac
atgacggcattctccggtggggtgtttgttctacccaactttgtagatccaatagcagac
gcagctctatttctcacattctttgacaaccctattgttgtgactaccgtcatcattgtg
tggatactgtacttctttgtcattcactgggccagacgggctgacaaacaagaccaagaa
ctggcgggtgtgttactatgtggggaggagaaccagcactatctctaccttgtctgcgtg
gtcacaggctggtggacatcggcaggaacaactgctaacgtttttttctccatcacaggc
agtgaacaaagcagcccaaagcgaaggttaactaccagtgtgcggccatgtttccagact
ggttatgaggactggttcattttcaccaccgaaaacagtttgggggatctgaaggagctc
tgcctctggcatgacaacacaggcacaagcccacactggtacctgagtcatgtgtacatc
aaagacttgcaggcaggcagttcatggacattcatctacaaagattggctggcagttgac
cggggatcgctacttcacacttccgccactgtcactgcaacatcacagacagagctacgg
aagaaacgccagcacaacttcatggtaaagacctcccaggatctcagagatggtcacctg
tggatcagtatattctccaaacgagctcgcagcacattcactcgggtccaaagactgacc
tgtgccctgtctctcctgttgactacaatgctgactaacatcatgttctatggagtatca
acagatgacccctcagatcaggtgggtgcagcaggaggctgggttatctcactctcagct
attgtgattggtatagagagcagcctgattatgttccctgtgaacctactggtactacag
ctgtttctaaaactgaagtctcgccccactgaggccgaagtaagggccacatctaggaga
tacaaggagagagcaggcttcattgacaggcttatggatgcgggccaggagatggcagaa
caagtgactgaaaaactgtccagcatgattcatggctttgcaactcagtctgaagagctt
gaatttgaagatgctaaatcatccttggacataccatgcgcacatgtgcagcctgatgtg
gagagtgctggtcaccgaggcataccagacattcaagttgggagtgactctactatggac
atctttgagagcaccaattcctttctacccacaatacaggaggtggatgagacccaggcc
gacgctgtcattagtccctccatgtctcctggagacttcggactggctgatacagagatg
gcagaaaatactggatcgaagaccacttttccaaaaatcagggtaaccagtgaaagcaag
aacaatggaaaatttctgccatggtggttcctatatgtggcatgggtgctggttttgatg
gtctccctagtctcctcctactttgtgatgctctacggcctcaagtatggctaccagcgc
agccttgagtggcttgtctccttcctcactggcttcactcagagcgccttcctcacacaa
cctctcaaggtttttgcaattgccatggtgttaacattgctgttcaagaaaacagttgaa
tttgatgactttggaccggagatttctattgatgaggatgagaagtatgtgaatggtgta
tgtgagctgcccgaggtcaatatcccatataacaagccactgtctgaatcccttctcaaa
cagatcaaggatagaatcaagttggagtggttaatggacatgaccctacgtgacctccta
ctgtattttgtgtacctgggggtcttgctggtggtggtgcacgggcaccgagaagtacgc
accgcctatctcaacacactggccttggaggacgtcctcgttaacccaggctgcgtcaat
accaacctgtgcttcttcttggaaaaggtaaataaggttgagacattttaccagtacctg
catgaggtggccatccccagcctggcagacatgtccgaggctgaccacgagtttgctaca
cctggctcctcccacttcctgctcgggccatggaggatacgacagacacgtgtcactaaa
gattcctgctatagtggggcagagaggatagtagagaggtttggtatgcgagtggactgc
tctggtgaatactggttgggcttggaggagacaggggattacaatagctcctgggcccac
aggcttcccaaggggtcgggggcaggcacctggtggggttatcagtctgcctggcagctc
aagaccctccctatcactggcagcctagccacatactatggaggtggctatgttatcacg
atgcctgctgatacaaccctccatgcaggtatagtggaggagatgtggaattctgactgg
ctggatgagcatacaagagctgtgatgatagagttcactctgtataacccgaatgctgat
ctcttcagtcccatggtcctgctgtttgagttctccaggtccggagctatcctgccatca
caccagttcttctccaccaacctttttcactactccacagactttgccacgtttgtagca
gtgtgtgaagtaatgtttctgtgtttcaatatcagctttacctactttgaatggaagaaa
ttgaaggtacttggaaggaaagcatatttcgaggacttttggaactatattgaactattg
caaatggggctctcatattctgtagttggcttgttcttccagcgcatgttgtcagtcagc
tcagcattggaagagtatggagctagtggagagaccacgtacattagctttaccaccgca
atattctggaacagtgtgctcaactatgtgatggcattcctagttggtctggtcaccctc
aagtccatcaagcttctacagttcaacaagagaacttttatgatttttgatactctcaat
cacactaaagggatgatagggagcttcatcatgatggctgttctgttcacagtggcctat
gcaagcttgggtgtgctggcatttgggactgtacagcatggctaccgagagatgtttacc
tcactgatgacagtgttcaactttgccctcggtgtatctgaccttcctggtctacaggga
accaataggatcctgggaccagcattctttgtctctttcgtgtttttggtacagttttgc
ttcatgacaatatttgtggccattttgaactttggcatcagtgaatctaaagctttgttt
gaaaagagaaagaataagtttgaactagtggaatatgtgctttcaaaaattaaaaccatt
gctgatagcagctag
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