Mya arenaria (softshell): 128226435
Help
Entry
128226435 CDS
T09995
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128226435
04121 Ubiquitin system [BR:
maea04121
]
128226435
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128226435
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128226435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
DUF659
DBD_Tnp_Hermes
DUF8247
FAM200-ZBED5_RNase-like
Microp_apicomplexa
Motif
Other DBs
NCBI-GeneID:
128226435
NCBI-ProteinID:
XP_052792270
LinkDB
All DBs
Position
3:complement(92079634..92085015)
Genome browser
AA seq
563 aa
AA seq
DB search
MLPEADVGLSMIAVSPETSGDGPQIDSCIPYRPARVTTCETCVLWWDFKSKESHEEASCV
QSAINSVRDCLPLSVVDGQGFRDMMALAAPSYTVPTRPTVRARVEKRYADERSNIISRLE
KATSVSLTTDTWTSNSTESFITVTAHYLDAEWILHSDVLMTRAMPERHTAENIASRLLEC
VREFGLTGKVECCVHDNARNIQKAGTLCPDWGDHSCFAHTLQLCIKPVLELPSVSKVLSK
CRKLVGHFKHSTTVTAELHRRQERMRKEGEKQPTLALIQDVPTRWNSTQLMCSRLDKLRR
VVTDIMLDDDVTKEADCDLLLRDGEWGIVADISTVLGPFTHVTTFMSKDKDVSIGEMFPI
VYSLVGKVLQPCNNETALVASMKTTLRDEMTERFQPGRDETVESLPMLASLLDSRYKKLS
FLPRQLRRRTHTMLEGRLDDVPFKVSSRDDGDCATPAKRPRLEFMVTAPESSVEDDLQLY
LAGKMDDATPALEWWRRNENRFPKVAQVARSVLAVPATSVPSERVFSSAGLVLNKLRNRL
NSDIVGAILFLNKNMRSVKCDTE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttacctgaggccgatgttggattgtcaatgatcgccgtgtccccggagacaagcggc
gatggaccacagatcgatagctgcattccataccgacctgcccgggttaccacgtgtgaa
acttgtgtattgtggtgggacttcaaatctaaggaatcacatgaagaagcatcctgtgtg
cagtccgccatcaactccgtacgtgactgccttccactcagcgtcgtcgacggccagggg
ttccgtgatatgatggccttggcggcaccgtcttatacagtacctacccggccgacagtt
cgtgcgagggttgagaagaggtacgcagacgaacgctccaacatcatctcccggctcgag
aaggcgacgtctgtctccctcacgacagacacgtggacgtccaactctaccgagagtttt
atcaccgtgacagcccactaccttgacgccgaatggatcctccattcggacgtcttgatg
accagagcaatgccagagcgtcacacagccgagaacatcgcgtcccgcctactagaatgc
gtaagggagttcggtctcacgggcaaggtggaatgctgcgtccatgacaacgcccgcaac
atacagaaggccggcacactctgtccagattggggagaccactcctgcttcgcccacact
ctccagctctgcatcaagccagtcctcgaacttccttctgtctccaaggtcctgagcaag
tgtcgaaagctggtagggcatttcaagcactcaacgacagtcaccgctgagctacaccgt
cgccaggagcggatgcggaaggagggcgagaagcaaccgacactggccctcatccaggac
gtccccacgaggtggaattccacgcagctgatgtgtagccgcctcgacaagctacgccgg
gtggtcactgacatcatgcttgacgatgacgtcacgaaggaggccgactgcgatctcctt
ctgagagacggcgagtggggcatcgttgccgacatatccacagtccttgggccgttcacc
cacgtgaccaccttcatgagtaaggacaaggacgtatccatcggggagatgtttcccatc
gtgtatagtttggttgggaaagtgttgcagccctgcaacaatgaaacagcactggtcgcc
tcgatgaagaccactctccgggatgagatgacggagaggttccagccaggccgagatgaa
actgtcgagtccctcccgatgctcgcctcacttctggactctcgatataagaagttaagc
ttcctgcccaggcagctacgacgaaggacacacaccatgctggagggccgccttgacgat
gtcccgttcaaggtcagctcgcgcgatgacggtgactgtgccacacctgctaagcgacca
cggcttgagttcatggtcacagccccggagtcatcggtggaggacgatcttcagctgtac
cttgccgggaagatggatgatgcaacaccagccctcgagtggtggcggcgcaacgagaac
cgttttccgaaggtcgcgcaagtggcccgtagcgtcctcgcggttcccgctacatctgtg
ccatcggagcgcgtattttcgtccgccgggcttgttctgaacaagttgcgcaacagactt
aacagtgacattgttggtgccatcttgttcctaaacaagaacatgcgttctgtgaagtgt
gacactgagtga
DBGET
integrated database retrieval system
