Mya arenaria (softshell): 128226477
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Entry
128226477 CDS
T09995
Name
(RefSeq) ribosome biogenesis protein SPATA5L1-like isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128226477
Enzymes [BR:
maea01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
128226477
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128226477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
AAA_14
RuvB_N
AAA_22
AAA_33
Viral_helicase1
NPHP3_N
DUF815
Rad17
AAA_11
RNA_helicase
AAA_28
NACHT
TIP49
AAA_18
ABC_tran
TsaE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128226477
NCBI-ProteinID:
XP_052792321
LinkDB
All DBs
Position
3:63062029..63072387
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AA seq
760 aa
AA seq
DB search
MELRIFHSASDSFHQKCFTNKETLSALSVQVGDYVEIETEGRRFISSIWVKNGLTLNSLF
MNDCVSCRVENKTVSCNEISTLSPMIASDVKVTVILPNIEDVIKMQHNAVRMNETTNHCK
DILTRLCVLEDFTVNCSKSKFANLAGIGRIKIDEVTCNAIVPQTHLSSYIITTGTNLTIN
KVHSEEWYSKMTKTEQLVKPGGLDSVLGLLRDLVRLPLDHKHQFSEMGVKPPRGILLRGP
PGCGKTSLVRYLAQTEKIFLLSINGPDIFGPLPGETEENMRKIFLKAKTMSREGPCMLFI
DEIDSICPRGGKSESTHAVRATAQFLSLMDGLSGGEDFLVVAATNRPSSLHPGLRRPGRL
DREVLVSPPNVHQRLEILESHAGALLLGDDLDLVAIATVTNGYVGADLASLCYEASYLAM
AEHSKVSQAHFLSSLHKVRPSLQKGAEGVVDVRPVSWDDIGGLDSVKLQIKQAVEWPLKH
PEAFQRMGLSPPCGVLLYGPPGCCKTTLVRAAATACHSTFLTLSGAQLYSPFVGESERLI
SEVFQKARACAPSILFLDEIDSIVGKRSASGSRGVQERVLSTLLNEMDGVGVRLDEGTGG
SQRVLEGSAAPTCIQVSEHTKVKKVREKTSVENKSVLVVAATNRPDLLDEALMRPGRIDR
IVYVGHPDQQARHQILSIYTQGLKLHECSLDELVGQTDMYTGADLQSLCREAALCALTED
LSTSVVAGAHFQQALGTVPPSLTPDLISRYAALTIPGRPR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagttacgcatattccatagtgccagtgactcgttccatcagaaatgcttcacaaac
aaggaaacattgtcagccctctctgttcaagttggtgattatgtagaaattgaaacagag
ggtagacggttcatttcgtcaatatgggtcaagaatggcttaactcttaacagtttgttt
atgaatgattgtgttagctgcagggttgagaacaaaactgtttcatgtaatgaaatcagc
accttgtctccaatgatagcatcagatgtaaaggtcactgttattcttccaaacattgaa
gatgtcattaagatgcaacacaatgctgtaagaatgaatgaaacaacaaaccactgcaaa
gatattctcactcgattgtgtgtgttagaggattttactgtgaactgttcaaaatcaaag
tttgcaaatctagctggcataggtcgcataaaaattgatgaagtgacatgtaatgccatt
gtcccacaaacacatctgagtagttacattattacaacaggcactaatttaacaataaac
aaggttcacagtgaagaatggtactccaaaatgactaaaactgaacagcttgttaagcca
ggaggattagactctgttctaggattattaagggacctagttagacttcctttagaccac
aaacaccaattttcagagatgggagtgaaacctccgagaggtattttgcttagaggacct
cctggttgtggtaaaacgtctttagtacgctatttggcccaaactgaaaaaatattttta
ttgtctattaatggcccagatatatttggaccattaccaggagaaacagaagaaaacatg
aggaaaattttcttgaaagccaaaacaatgagtagggaagggccatgcatgttgtttatt
gatgaaattgattcaatatgtccaagaggagggaagtcggagagtacacatgcagtcaga
gctaccgcccagtttctatccctaatggatgggttatctggaggagaggacttcctggtt
gtagctgcaactaacaggccttcaagtcttcaccctgggctacgcagaccgggcaggctg
gacagggaggttcttgtcagtccaccaaatgtacaccagaggctggagatcctggagtcc
catgcaggggctctgttgctaggtgatgaccttgacctggtggccatagcaacagtaacc
aatggttatgtaggagctgacctggcgtccctctgttatgaggcttcataccttgctatg
gctgaacacagtaaggtgagccaggctcactttctgtccagcctccataaggtgcgacct
tccctacagaaaggtgcagagggggtggtggatgtgcggcctgtcagctgggatgacatt
gggggacttgactcagtcaaactgcagattaaacaggcagtggaatggcctttgaagcac
ccagaggcattccagcggatgggtctgtctccaccctgtggtgtgctgctgtacgggccc
ccagggtgctgtaagacgacccttgtgcgggctgcggccaccgcctgtcacagcaccttc
cttaccctcagtggtgcgcagctgtactctcccttcgtcggtgagtctgagagactcatt
tctgaggtattccagaaagcacgtgcctgtgccccgtccatcttatttctggacgagata
gattcgatagtgggcaagcggtcagcatctggcagccgtggtgtccaggagcgagtcctc
tcaactttactgaatgagatggatggtgttggggtcaggctggatgaggggacaggggga
tctcaaagggtcctagaagggtcagctgcacctacatgtatacaggtatctgaacataca
aaagtaaagaaagtgagggagaagacatcagtggagaataaatcagttcttgttgtcgcg
gcaaccaacaggcctgacctactggatgaggccctgatgaggccaggcaggattgatcgt
attgtgtatgttggccatcctgatcaacaggctcgtcatcagatcctgtccatttatacc
caaggactgaaacttcatgagtgtagcttagatgagcttgttggacagacagacatgtac
acaggggcagacctgcaaagcttgtgtagagaggcagccctatgtgccctaacggaggac
ctgtcaaccagtgtggtggctggggcccatttccagcaggccctgggtactgtacccccc
tccctcaccccggatctcatatccagatatgcagcactcacaatccctggcaggccaaga
tag
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