Mya arenaria (softshell): 128227036
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Entry
128227036 CDS
T09995
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128227036
03036 Chromosome and associated proteins [BR:
maea03036
]
128227036
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128227036
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
128227036
SLIK complex
128227036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
128227036
NCBI-ProteinID:
XP_052793170
LinkDB
All DBs
Position
3:complement(35080011..35118350)
Genome browser
AA seq
1833 aa
AA seq
DB search
MSKTADNLDITDLDFNKPLFGDIPTKTTSKLPSTDYNNDESYKHSLPRHKVKEEDHVSNN
SESNSNNSSGSGSESESDSENSASDGSGSDEKSGSSASGSEGEVTPRKDSKEYGSQLRLH
DSDTQDEPKAKKGRGRPKKEEILQLKEENDNFGERDRRDPKFWQEDPDLYGVRRSGRAKK
EPTRYNVGLSSSDEERPRRKRRNTGQRKNSGEWNSDSSNSEASSTERYKPIRQAVNRVRK
GKRGRPARSSAGNVSRQRKPQLSSGSEGDNFSDSGSDYDEASRSFKSYTKRSAAQKVSYK
EDTDGATDSDDIIEGPEDDVNVVKEDENPEGIDRILDHREGKKGATGAKTTIYNVEANGN
PNITLPENTERETQFFIKWKGWAHIHNTWENEETLREQKLSGLKRLDNYIKKMDEINEWK
RFASPDDIEYYDVQQEYNEDLYKNCLAVERIIAHSDEKNSNEGNGFPDYLCKWTGLPYSE
VSWEDGELLSAKFQDRIDNYMVRNKSQKIPTKLSRVLKNRPKYLPLKNQPSFIGSDDLQL
RDYQLDGVNWLMHSWSKENSVILADEMGLGKTIQTIGFVSILYNMYQLYGPFIIVVPLST
VVAWQREFENWCPDINVVIYLGDVNSRNIIRDHEWCHPGNKRLKFNVVVTTYEILLKDKA
FLGAVSWAELIVDEAHRLKNTDSLLYRTLMEFKANHKVLITGTPLQNSLKELWALLHFIM
PLKFPKWSEFEEKHSRADKTGFTQLHKQLEAFLLRRVKKDVEKSLPAKTEQILRVEMSSK
QKQYYKWILTKNYKELNKGVKSSISSFVNIIMELKKCCNHQLLVRPEDSEENSVDHLQNL
IRGSGKLILLDKLLLRLKEKGHRVLIFSQMVRLLDILSEYLQMRHFQFQRLDGSIRGDLR
KTALDHFNAEGSQDFCFLLSTRAGGLGVNLATADTVIIFDSDWNPQNDLQAQARAHRIGQ
KNQVSVYRLVTKNSVEEEIVERAKRKMVLDHLVIQRMDTTGRTVLNKGGGDLTNTKTPFS
KNELASILKFGAEELFKEDNDDEEPQVDIDEILQQAETREMAENNGVGDELLSQFKIVTF
ENLEDDEIESTGKDWSSIIPKNDIERVEEEERQDLLLELNLPPRQRTTLKQLEKSYDSDK
ENDDDDDDEDSGSDDDRPKKRGRPRAGGKNDQIKGFTNAEIRRFVKSYKKFGDPLSRLDD
IACDAELQEKSESDLRKMAELLKSQCDHAFKEFNSKKQLEEQNGETPASKKGPRSINCKI
ASVIVNVQSIVKAGGDLEPLVRYIPKTKSEKKKFRIDFHCKAGNFDCPWDVEEDSALLKG
IYDYGMGNWEQIKMDQELGLYSKILPDGDKKPQAKHLQTRADYLLRLLKKHLDGTGVVSR
PSGRGRKSKKLMKSKAEVPDYVDDSDSSAKSANDTNQTAPDHTGTQKSHKKADKSDKDTS
KKSDDHDHHHHHHHHNKQEKRKKEKEKKKKMKEKAGPMHFTAINEPVAISQDGEFDGELP
EEVFKECKERMRPVKRSLKHLDRPEEGLSDRDQVIHTRQCLLKIGDRINECLTEMNNPEK
IKQWRCYLWIFVSKFTEFDARKLHKLYKHALKKRDEERDKDENSHQSKSQQGNDNHHKRS
HEDGKSYNSKRSHIEHDSSSNSNWSRPSTTAPHSLATTTFQNAFNNSSVTVSSPSDRWKQ
SSPLDQRAQPEKKPYSRNRYEGGNSSYSRGAGGQYPHHDHPRFSDHKPHYGGDNKGFNER
REGGHISGYSKREYGPNSNPYGFRDPRNEGMRSDYRKYGSGGGYRDYPPASGRDSHVNSS
FSHDRKRRNEYSYDREARDPRYRKEQRLDDSYS
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacagcagacaatcttgatatcacagaccttgacttcaacaagccattgttt
ggtgacatcccaaccaagaccacctcaaagctaccatcaaccgactacaacaatgatgag
agttacaagcattcactgcccagacataaggtgaaggaagaggatcatgtgtcaaacaac
tccgagtctaattcaaacaactcaagcgggtcaggatcagaatctgagtctgactcggag
aattcagcctctgatgggtcaggtagcgatgagaaatcaggaagtagtgcttcaggaagc
gagggtgaggtcacacctcggaaagatagtaaagaatatgggtcacaactgaggttgcat
gactctgatacacaggatgagccgaaagccaaaaagggccggggtagaccgaagaaagaa
gaaatattgcaattaaaagaggaaaacgataattttggagaaagagaccgccgtgatcca
aagttctggcaagaggacccagacttgtatggggttcggaggtcaggccgggccaagaag
gaaccaaccagatataatgtagggttaagtagcagcgatgaggaacggccaagaaggaaa
agacgaaatactggacagagaaaaaattctggtgagtggaacagtgatagcagtaatagt
gaggcaagttcaacggagaggtacaagcccattcgacaggctgtgaacagggtacggaaa
ggcaagcgggggcggcctgccaggtcgtctgcaggaaatgtatcccggcaaagaaaacca
caattgtcttctggctcagagggtgacaatttctccgatagtgggagtgattatgacgag
gccagtcggagctttaaatcttacaccaaacgatcggctgcacagaaagtcagctacaag
gaggacactgatggagcgacagacagtgatgacattatcgagggcccggaagacgatgtt
aatgtggtgaaggaagatgaaaaccctgaagggattgacagaatccttgaccacagggag
gggaaaaagggagcaacaggagctaagacgacaatctacaacgtcgaggcaaacggcaac
cccaacattaccctacctgagaacacggagcgtgaaacacagttctttatcaaatggaag
ggctgggcccacatccacaacacatgggaaaacgaggaaactctgcgggaacaaaaactc
agtgggctgaaaaggcttgataactacattaaaaagatggatgaaattaatgaatggaag
cggtttgcttcgccggatgacatagaatactatgatgtccagcaagaatataacgaagat
ctgtataaaaactgtctcgccgtggaaagaatcattgcgcactctgatgagaaaaacagc
aatgaagggaatggtttccctgattacttgtgtaaatggacaggcttgccttattctgag
gtttcctgggaggacggggaacttctgtctgccaagtttcaggacagaattgacaattat
atggtgcggaataagtcacagaaaatccccacaaagctgtctcgagtgttaaagaaccgt
ccaaaatacctgccgctgaaaaaccagcccagttttattggtagcgatgacctacagtta
cgagactatcagcttgatggtgtcaactggcttatgcactcctggtcaaaggagaacagt
gttatacttgctgatgagatgggtctcggtaagacaatccagaccattggcttcgtgtcc
atactatacaacatgtaccaattgtacgggccgttcatcattgtcgttcccctctccaca
gtggtagcctggcagcgagagtttgagaactggtgccctgacataaacgttgtcatatac
cttggtgatgtgaacagtagaaacattatccgggatcatgaatggtgtcatcctggaaac
aagagattaaagttcaatgtcgtggtcaccacgtacgagatcctgctgaaagataaggcc
ttccttggtgctgtaagctgggcagagctgattgttgatgaagcccatcgcctgaagaac
actgactccctcctctaccgaacgcttatggaattcaaggctaaccacaaggttctcatc
accggtacaccgctacagaactccctcaaggagttgtgggctctactgcacttcatcatg
cctctcaagttccctaagtggtcggagtttgaagaaaagcactcacgagcggacaagacc
ggctttacccagctacacaagcagctagaggcctttcttctccggcgggtgaaaaaggat
gtggagaaatcactgccagccaaaacagaacagatcctccgtgttgagatgtcctccaaa
cagaaacagtattacaaatggatcttaacaaaaaattacaaggagttgaacaagggggtc
aagtcaagtatctcatctttcgtgaacattatcatggagttgaagaaatgctgtaaccac
cagctgcttgtgcggccagaagacagcgaggaaaactctgtcgaccaccttcagaacctg
atccgtgggagtggtaagctgatcctgctggacaagctgcttctgcgactaaaggagaag
ggccatcgtgttctcatattttcacagatggtgcgccttctagacattctcagcgagtac
cttcagatgcgacacttccagtttcagaggttggatggctctatccgaggtgatcttcgc
aaaacagcccttgatcattttaatgcagaaggttctcaggacttctgtttcttgctgtca
actcgtgcaggaggtctaggtgtaaacctggcaactgcagatactgtgataatatttgat
agcgactggaaccctcagaacgacctgcaggcacaggcaagggctcacaggattggccag
aaaaaccaggtgtcagtgtaccgactggtgacaaagaacagtgtagaggaggaaattgtg
gagagagctaaacggaaaatggtgctggatcaccttgttattcagcgtatggacacaact
ggccgtacggttttgaataagggcggtggagatctcactaataccaagacaccattcagc
aagaatgagctggcttccatactcaaatttggtgctgaagagttgtttaaagaagataat
gatgacgaggaaccccaggtagacatagatgagatcttgcagcaggctgagactcgagag
atggctgaaaataacggggtcggagatgaacttctctcacagttcaaaattgtaaccttt
gaaaaccttgaggatgacgagattgaatccactggtaaggactggtcatccataattccc
aaaaacgacatagaaagagtagaagaagaagaacgacaggatttacttctcgaactcaac
cttcccccgcggcaacgcactaccctaaagcagcttgagaagagctatgacagtgacaag
gaaaacgacgacgatgatgatgatgaggattcagggagtgatgatgatcggccaaagaaa
cggggccggccccgagctggcggcaagaatgaccagataaagggcttcactaatgcggag
atacgacgctttgtgaagagctacaaaaagtttggggatcctctctcaaggttagatgac
atagcgtgtgacgcggagctccaggagaagtcggagtcagatctcaggaaaatggcggaa
ctgctcaagtcccagtgtgatcacgcttttaaggagttcaactccaaaaaacagctggag
gaacagaatggggagactcctgcaagcaagaagggtccacgaagcatcaactgtaagatt
gcgagtgtgatagtaaatgttcagtcgattgtgaaggctggtggagatctggaacctcta
gtcagatacatacccaagacgaagtctgaaaagaaaaagttccgtatagacttccactgc
aaggctggtaactttgactgtccctgggatgtggaggaggactcggcactgctcaaggga
atctatgattacggtatgggtaactgggagcagatcaagatggaccaggagcttggcttg
tacagtaagatcctgccagatggggacaagaaaccccaggcgaaacatctccagacccgt
gcagactacctgctacgactgctgaagaaacacctggatgggacaggggttgtctcgagg
ccttctgggagaggtcgaaaaagcaagaaattgatgaagtccaaagcagaagtgccggat
tatgtggatgattccgactctagtgctaaaagtgctaatgacacaaaccaaactgccccg
gatcataccggcacccaaaaatcacataaaaaggctgacaaaagtgataaagacactagc
aaaaagtcagacgatcatgatcatcatcaccaccaccatcatcataataaacaggagaag
aggaagaaagagaaagagaaaaagaagaaaatgaaagagaaagcggggccaatgcatttc
acagctatcaatgaacctgtagcgatctcacaagacggcgagtttgatggagaactgcct
gaagaagtcttcaaagagtgtaaggagcgtatgcgtcccgtgaagcgttccctgaagcac
ctggatcggcccgaggagggtttatcagaccgagatcaggtgatccacacacgacagtgc
ctgctcaagataggggatcgaatcaacgaatgtctcacagagatgaacaaccctgagaag
attaaacagtggagatgctacctgtggatatttgtgtcaaagttcaccgagtttgatgct
cggaaactccacaaattgtataaacatgccctgaagaagagggacgaggaaagagacaaa
gatgagaattcccatcagtcgaaatctcagcaaggcaatgataatcaccacaagagatcg
catgaagacggcaagtcctacaatagtaaacggtctcacattgaacatgacagttcaagc
aacagtaactggtcccgtccaagcaccaccgcgccccattccctcgctaccaccacattc
caaaatgcatttaacaactcatcggtgactgtatccagcccctctgaccgttggaagcag
tcaagtccccttgatcagcgtgcccaacctgagaaaaaaccttacagccgaaataggtat
gaaggtggcaacagttcctactccagaggggctggaggtcagtaccctcaccacgatcat
ccccgcttctccgaccacaaacctcactacggcggtgataacaaggggtttaatgagcgg
cgtgagggtggtcatatcagtggttattccaagagagagtatggccccaattctaacccc
tatggcttccgcgacccgcgtaatgaggggatgcggtctgattaccggaaatatggcagt
ggtgggggctatcgggactaccctcccgcttccgggcgggactcccatgttaacagcagt
ttttcacatgatcgaaaaagaaggaatgagtacagctacgaccgggaggctcgagaccca
cgctatcgcaaggaacagagactggatgacagctactcgtag
DBGET
integrated database retrieval system