Mya arenaria (softshell): 128227048
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Entry
128227048 CDS
T09995
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128227048
Membrane trafficking [BR:
maea04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128227048
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
128227048
NCBI-ProteinID:
XP_052793197
LinkDB
All DBs
Position
3:complement(85278504..85333454)
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AA seq
1992 aa
AA seq
DB search
MDDRRVADYFVVAGLPENPFPLEEFSNEAAIKPTYKLDPITDITVINKSISEKVPRGYTL
LEKTPSDYPADMNHGSLRQHEMYICYRRSRDKPPLTDVGVLYEGKERLMSGCEVIHTTYF
GTPANVNNSSNGRTYITYRRAAENAPSDMLAVVDLCIVLENKGEGPPHSYCQIHKNLNRG
LMGSDVYLCYKKAMTKTDILAYKPAILNRYPAEDYADFPLPESVSMFCLPMGATVECWSA
KAQHPYPVFSTFILTGIGWNKVYGAAITFYEEYSEDKLTDLQMRHLGLKNKHIREQYRIM
KTVHSNKSICLLSRWPFFEAFKHMLQYIHRISITGPHSVPIERHISHFMYDVPYPSPQRP
RILVQLSHDAISLAMPEDSPLPQSGASFVAMLKNLGPENCMTILLYVLHEHKILVHSLRA
SVLTAVAEAISTLIFPLQWQCPYIPLCPLGLSDVLSAPTPYIIGLDSRYFDLFDPPPDVF
CVDLDTIRIWPPDDKKNLSYKLLPRKPTKVLQESLHRLYDRLVVELPRHGQDDSTVDLAP
LDQDFKKKHKEILLELEIQEVFLRFMACILKGYKNFLKPIANMPDLDTTNAASLFDMQGF
LKSREKANHKFYQTLLRTQLFNRFIEERSFVSDKDDSLAFFDECTEKVVETSEEPKLIEL
EDSSKSERTMFILPPEPVGLPDGKQYSYNGFPQLQGDLFLEKNKPARSSSQQRDRGGPSS
PVARRTKQEIRTAQKHAQQVFNQPSLWAKCLLSHAYSLWFMLLPAYIKYSQSVTKALILA
YDVLKNMQRQKLKPPDELCYRVMLQLCGQYNKPVLAVKVYSEMKHAGVHPNAITYGYYNK
AVLEGRWPTTISQGRVLWRKLRNVVLGVAKFKRAVRRRSMSICSNSGSEYDQVSHASLDS
CLEEERLDTRHETIMLAGSRSDHGQVPGSLQVKVNGKIPEEVERAPSDRGYNSMTQEEAK
NFSDLISQECPEESSFKRDLKNALRFSFRRKQKKKESEITEETQDDEDKAFKGSSDLSTA
DQFRMRVKSIVRQISLPAQGSPRGSFHGSSAAGVLMVSESLMSGDALSKSMGPTVGHVGL
TIANDKQRKRHRSAGDFQTKARSNSLFANWRQKHSSEDTSIKFSDILASEEGGDGMKTRN
LRGGEVLSPGGTEMQDISEEIKDSGVGLDENEALGDVVGGNEGGAQTQGTSSVSKPVNCD
SEPHNIGDHASLIDGKGLTDEQTLDNIAEIKSRSSSLKSATSSPLHSVATPVTENDPLGL
FTAPDLRATKIQEQRQSPEKNKEEFVAKKPFEGEVKLTNKSLPKLDLGLCNSIPASSSEG
KTTVDSTGSAGERLLEKVLSPVEKVQKTLLKLERTNSFPENLGNSSKTTTPSKSHSVRAE
VASLGRSSSSLYEQKTEPMAGTPRSGGLFRTGSFRRHKQNFSGMLKIATGAVANKLSEMK
WLTPTKMGSNNSLTPSYDDSDSETESYQETQRKKGSLDFLHRSIDRLDAHSINGTHESAP
SHPSFLEQMERECELERASDVVMATGGEAGEMVIDVEMSSCSRCPRCRCLLYDEELMAGW
NADDSNLNTACHFCHSKLVPHLLIYIKDYRRCKVSETAEDDTEALIDFGSPGAHHPSPSY
GKDVNICPPTDPSGHFMFGEDMEDNTSVSSFDTHHDPWQRHSDHVPASPPDVSSPSHPKP
AENGPSLSEMANMGHRRTTSECLTSATMYSSSLESLESLTFKNLRSPLSISMDESDDGHG
RPTLTPERRRAMFEGGLSSMEPVSVPYLSPLVLRKNLESIIESEGNSALAKDSFLDDHPI
IYWNLMWYFKRIGAYNHLTAFLLTSQLLHRGREPLPVGEYGPENVRVRACWDNLRIHQEV
GLPMHVAWNNLHSSTTVDALLTEAQPFNRAVMHQIISNIQCNDVLTPIKLVMNGRRRLRP
RKKRFRSMYRDITYLAFKACGRDNIDNEAFDREYKMAFSRLSPGEMKRLQRDDKPRSPLV
QACRKVFSELDL
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccggcgagttgcggactacttcgttgttgccgggctaccagagaaccctttt
ccgctggaggagttttctaacgaagcagccatcaagccaacatacaagcttgacccaatc
acagacataactgtcatcaacaagtctatcagtgagaaggtgccgcggggctacaccctc
ttagagaagaccccatccgactacccagcggacatgaaccatggaagtctccgccaacat
gagatgtacatttgctacaggcgtagtcgcgacaaaccacctctcactgatgtaggggtg
ctgtacgagggtaaggagcgtctcatgtccggctgtgaggtaatccacacaacatacttt
ggaacacctgccaatgtgaacaacagcagtaatgggcgcacatacatcacataccggagg
gcagcggagaatgcccccagtgacatgttggctgtcgttgatctctgtattgtactggaa
aataagggagaaggcccaccccactcctactgccagatacataagaacctcaacaggggg
ctgatgggatcggatgtttatttgtgctacaaaaaggccatgacaaaaacagacatccta
gcctacaaaccagctatcctgaatcgctaccctgcagaagattacgcagacttcccgctg
ccagagtccgtctcgatgttctgtctgccgatgggggcgacagtggagtgctggtcagcc
aaggctcaacacccatacccagtgttctcaacattcatactcactggcattggatggaac
aaggtatatggagccgctatcacattctacgaggagtactcggaggacaaactgacagat
cttcagatgcgccatcttggcctgaagaacaagcacattcgggagcagtaccgcatcatg
aagaccgtccactccaacaagtccatctgcctgctgtctcgatggccattctttgaggcg
ttcaagcatatgcttcagtacatccatcgtatctcgattaccgggcctcactctgtaccc
atagagaggcacatatcacacttcatgtacgacgtaccgtacccgtccccccaacgaccc
cggatccttgtgcagctcagccatgatgctatctcactcgccatgcccgaggactcgcca
ctaccacagagtggtgcgtcttttgtcgcaatgttgaagaacttgggtccagagaattgc
atgactatcttactgtacgtccttcatgagcataaaatcctagtgcactcgctccgagca
tccgtcctcacagccgtcgccgaagccatatccacgctgatattcccgctacagtggcag
tgcccttatattcctctgtgtcccctggggctgtcagatgtactcagtgcccccaccccc
tacatcatagggctagattcacgctactttgacctgtttgatccgcccccggatgtgttt
tgtgtggacctcgataccattcgcatctggccgcctgatgacaaaaagaacctgtcatac
aagctgttgccacggaaacccacaaaagttctacaagagtcattacaccgtctatatgac
cgtctggtagtggaactgccacggcatggccaggacgacagcacggtggacctcgcacca
cttgaccaggacttcaagaagaaacacaaggagattttgctagagctggagatccaggag
gtgtttctacgattcatggcgtgtatcctcaagggctacaagaacttcctgaagcccatt
gccaacatgccagacctagatacaaccaatgcagcctcactttttgatatgcagggtttc
ttgaagagtcgtgagaaggcaaaccacaagttttaccagacacttttgcgtacacaactc
ttcaaccgcttcatagaggaaagatcatttgtctcagataaggatgacagcctcgcgttt
tttgatgagtgcacagaaaaggttgtggagacatcagaggaaccaaagctgatagagctg
gaagactcatctaaaagtgagaggacaatgtttatcctacccccggagccggttggcctg
cctgatggcaaacagtacagctacaatggtttcccccagctgcaaggtgatctgttcctg
gagaagaacaagccggctcgctcctcctcccagcagcgagaccgcggaggcccatccagc
cccgttgcccgccgtaccaaacaggagattcgaacagcacagaaacatgcacagcaggtc
ttcaaccagccctcactctgggcaaagtgccttcttagccatgcttacagcctgtggttc
atgctgctgccggcctatatcaagtacagccagtcagttaccaaagccctcattctcgcg
tacgacgtgctcaagaacatgcagaggcaaaaactcaaacctccagatgagctgtgttac
cgagtgatgttacagctatgtggccagtacaacaagcctgtgctggcagtcaaagtctac
tcagaaatgaagcacgcaggggtacatccaaacgccatcacatatggatactacaacaaa
gctgttcttgagggtcgttggccgaccaccatcagtcagggtcgtgtcttatggagaaaa
ttacgtaacgttgtgctgggtgtggctaaattcaagcgtgcggtgaggcgacggagcatg
tccatctgctccaactcgggcagtgagtacgaccaggtgagccacgccagtttggacagc
tgccttgaagaggagaggttggatactcggcatgagacaatcatgctggccggctcacgc
tcagaccatggacaagtccccgggtcactccaggtgaaggtcaacggcaagatacctgag
gaggttgaaagagccccctctgaccgtggctataactctatgacccaggaagaggcgaag
aatttttcagacctgataagccaagagtgtccggaggaatccagctttaagagagatctg
aaaaatgctctcagatttagttttagaagaaaacagaaaaagaaagaatccgaaattaca
gaagaaactcaagatgatgaagataaagcatttaaaggctcatccgacctgtcaacagca
gatcagttccgtatgagggtgaagagcatagtgcgtcagatctcactcccggcccaggga
tcacccagaggatcatttcatgggtcatcagcagcaggagtgttgatggtgagtgagtct
ctgatgtctggggacgctctctccaagagcatgggccccactgtggggcatgtcggactg
accatcgccaatgacaagcagaggaagcgacaccgcagtgccggcgacttccagacgaaa
gcccgctccaatagtctctttgcaaactggcgacagaagcacagcagtgaggatacaagt
ataaagttctcggatatacttgccagtgaggagggtggggatggtatgaaaaccaggaac
ttgaggggaggagaggtgttgagccctggggggacagagatgcaagatatctctgaggaa
atcaaggacagtggggttgggctagacgagaatgaggccctcggtgacgtggtagggggt
aatgagggcggagcgcagactcagggtaccagcagtgttagtaaaccagtcaactgtgat
agtgaacctcataatattggtgatcatgcatctcttatagatggcaaaggcttaacagat
gaacaaacattggataacatagcggagattaagagtcggtcgagcagtttgaaatctgcc
acatctagtccattacattccgtagctacaccagtgacagagaatgatcctctcggtctg
tttactgctcctgacttgcgggcaaccaaaattcaggaacagagacagtcaccagagaag
aataaggaagaatttgtggcaaagaaaccatttgagggagaggtgaaattgactaacaaa
agtttacctaagttggacctgggcttgtgcaattccatacctgcctcatctagtgaaggc
aagacaacagtggattctacagggtctgcaggggaaagactgctggaaaaggtgctgtca
ccagttgagaaggtgcaaaagactttactgaaactggaacggaccaatagttttccagaa
aaccttggtaattcaagcaaaacaaccactccttccaagtctcactcggtgagagcagag
gtggcctccttagggaggtctagttcatctctttatgaacaaaagactgagcctatggca
ggaactccaagatctgggggcctgtttaggacaggcagttttaggcgacacaaacaaaac
ttcagtggaatgctcaaaatagccacaggtgctgtggccaacaaactctcagagatgaag
tggctgactcccactaaaatgggttccaacaattccttaacaccgtcatatgatgattcg
gactcagaaactgagagttatcaggaaactcagcgtaaaaaaggcagtctggattttcta
catcgtagcatagacagactggatgctcacagtataaatggaacccatgagagcgcgcct
tcacacccatcattcctggagcagatggaacgagagtgtgagctggagagggctagtgac
gttgtcatggcgacagggggtgaggcaggggaaatggtcattgacgtggagatgtcatcc
tgcagcaggtgcccaagatgtcgctgcctcctgtacgatgaggaactgatggctggctgg
aatgctgatgactctaacctaaacacagcctgccacttctgccacagcaaacttgtgcca
cacctcctcatatacattaaggattaccggagatgtaaagtgtctgagactgctgaggat
gatacagaggccttgatagactttggcagccctggcgctcaccacccctccccatcctat
ggtaaggatgtgaacatctgcccaccaactgatcccagtggccacttcatgttcggtgag
gacatggaggacaacacatctgtgagcagctttgacacgcaccacgacccctggcaacgc
cactccgaccacgttcctgcctcaccacctgatgtttccagccccagtcatccaaagcca
gcagagaatgggccaagtctgtctgagatggccaacatggggcacagacggacgaccagt
gagtgcctgacaagtgccactatgtacagctcctccctcgagtccctggagagcctcaca
ttcaagaacctgcgctcgccactcagcatctcaatggatgagagcgatgacggccacggg
aggcccacacttaccccagagaggaggagggccatgtttgagggtggcctgtcgtcaatg
gagcctgtgtcagtgccgtatttgagcccactggttctgcgtaagaacctggagagcatc
attgagagtgagggtaactctgccctggccaaggactccttcctcgatgaccaccccatc
atctactggaacctaatgtggtacttcaagcgtattggagcatacaaccaccttactgct
ttcctgctcacgtcccagctgttacatcgcggcagggagccgctaccggtgggagagtat
ggcccggagaatgtgcgcgtgcgggcctgctgggacaacctgcgtattcaccaggaggtg
ggcttgccgatgcatgtggcctggaacaaccttcacagctcaaccaccgttgatgccctc
ctcaccgaggctcagcctttcaacagggctgtgatgcaccagattatcagcaacatccag
tgtaacgatgtgctcacgccaatcaagcttgtgatgaacggtcgtcgacgtctccgccca
cgcaagaaacgtttccgcagcatgtatcgcgacatcacctaccttgccttcaaggcctgt
ggcagggacaacattgacaatgaggcttttgaccgcgagtacaagatggcattctcccgg
ctgtcaccaggggagatgaagcgactacagcgagacgacaaaccccggtctccccttgta
caggcatgcaggaaggtcttcagtgaactagatctttag
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integrated database retrieval system
