Mya arenaria (softshell): 128227120
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Entry
128227120 CDS
T09995
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128227120
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128227120
Factors involved in mRNA localization
Other mRNA localization factors
128227120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
oligo_HPY
Motif
Other DBs
NCBI-GeneID:
128227120
NCBI-ProteinID:
XP_052793299
LinkDB
All DBs
Position
3:complement(43049802..43082564)
Genome browser
AA seq
1273 aa
AA seq
DB search
MATGEKISLTDALQNVDVLDELPLPDQQPCIEALSLSIHYQTNFDTNFEDRSAYVTGVAR
YIEEATVHADLNKLLEEGKEYAVMIYTWRCCSRALPQVKSNEQENRVEIYQKIVEVLEPP
VSKLRDFMYFQKRMKERFCGEVKRLSHKEKRKDFVSEAYLLTLGKFLNMFAVLNDLKNMK
AALSNDYSAYNRAAQFLKVMADPATLEESQNLSMFLATQNKIRDELQKTLLTIDGYEELL
ADIITICVHMYENKMYIEPSEKYMLVKVMAFGLFMMDNSNNSIYKMDQKKRISISKIDKI
LKQLEIVPLYGDMQVAPFQYIKKSANFDPSKWPACESSALSPQSNILANLEPIREDHMSY
ISQLSRHSNEFVIGKNINIKQAITTTRESPRTDAENKDLYELALRGLQLLSAWTQQVMEL
YTWKLLNPTDPHQNPSCPVEAEEYERSTRYNYSSAEKFAIIEVIAMIKGLQLLMLRMESV
FMDAIRRHIYAELQDFVQLVLRDPVRKAIKKKNDVIKVIVMSVRNTCVDWLRGVEPNEDP
AMKGKKDPEEGFQIKVPRRNVGPSTTQLYMVRTMLESLIAEKNTGGKKTLRKDIDYQHFL
AIDNFHKNSFFWSYCINFNESLHNSCNLSQLWFREFFLEMTMGKRIQFPIEMSMPWILTD
HILETKESSMMEYILYPLDLYNDSAHYALTLFHQQFLYDEIEAEVNLCFDQFVYKLSDQI
FAYYKQLAASMMLDKRFRAECANAGIVIDFPRANRYETLLKQRHVQLLGRSIDLNRLVGQ
RINAALQKSLEVAISRFEGGDITGIMELDGLIDCNKLTHKLLKQFLTLNDFDAMLREANH
NVSAPYGRTTLHVFWELNYDFLPNYCYNAATNRFVKTNYTFVEASQREKPPNASHPYIWG
TKTLTSSFSSIYSQYAGFVGPPHFRVCCRLLGYQGIAVVVEELLKIVSEQLTGPLMRYTK
ILMSSMPQNCRLLRYDYGSPGVMGYYQAQLAELIQYPDMRTEVFQLFREVGNAILFCLLI
EQSMTQEEVCDLKHAAPFQNIIPKPFIPAKDGQSRKDKEEELKTVMKRLEGKYQALQVVP
IIGKFGNQKQSNIAQEGDLLTRERLCCGLSMFEVILKRIQSFLDDPVWHGPPPANGVMNV
DECTEFHRLWSAIQFVYCVPVGENEYTVEQLFGEGLNWAGCAIIVLLGQQRRFEALDFCY
HILKVNRVDQKDENVKGIQLKKMVDRIRKFQILNSQIFATLNKYLKTGDSDGMPVEHVRC
FQPPIHQSLATTI
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggccactggagagaagatcagtttgacagatgctctccagaatgttgatgtcctggat
gagttgcccctgccagaccagcagccgtgcattgaagccctttccctgtccattcactac
caaaccaactttgacaccaattttgaagaccggtcagcctatgttactggggtagctagg
tacatcgaggaggccactgtccatgcagacctgaacaagttgctggaggaagggaaggag
tatgctgtgatgatctatacctggcgttgctgctcacgagccctaccacaggtgaagagc
aatgagcaggagaaccgggttgagatttaccagaagattgtggaagttctcgaacctccc
gtctcaaaactgagagacttcatgtactttcagaaaagaatgaaagagcgattctgcggg
gaagtgaagcgactttcacataaagaaaaaaggaaagactttgtgtccgaagcttacttg
cttacacttggaaagttcttaaacatgttcgcagttcttaacgacctgaaaaacatgaag
gcagctttaagtaatgactactctgcctacaatagggcagcccaatttctgaaggtgatg
gcggacccggcaacattggaggagtcacagaacctgtccatgtttctggcgacccagaac
aagataagagacgaactccagaagacgcttctcaccatcgatggctacgaggagctgctc
gcggacatcatcaccatttgcgtacacatgtacgagaacaagatgtacattgagcccagc
gagaaatacatgctcgtcaaggtgatggcttttggactgtttatgatggacaattccaac
aacagcatctacaagatggaccagaagaaaaggatcagtatctccaagattgacaaaata
ttaaagcaactagagatcgtgcccttgtatggcgatatgcaggtagccccgttccagtac
attaagaagagcgcgaactttgacccatcaaaatggccggcttgtgagtcaagcgccctt
agcccacagtcaaacatcctcgcaaatctggagcccatacgtgaggaccacatgtcctac
atcagtcagctctcacgacacagcaatgagtttgtgataggcaaaaatattaatattaaa
caggcaatcacaacaactcgcgagagtccacgtacagacgcagaaaacaaagacctgtac
gagctggcattgaggggcctacagcttctttctgcatggacccagcaggtcatggaactg
tacacatggaaactgctgaacccaacagatccccaccagaacccgagttgtcctgtagag
gcggaggaatatgagaggtccacacgctacaactacagcagtgccgagaagtttgctatc
atagaagtcattgccatgatcaaggggctgcaactcctcatgttgaggatggagtcagtg
tttatggatgccatacgtcgacacatctacgccgagctgcaggattttgttcagcttgtt
ctccgagaccctgtcagaaaggctatcaagaagaaaaatgatgttattaaagtgatagta
atgtctgtgcggaacacatgcgtggactggctgcggggggtggagcccaatgaggacccg
gccatgaagggcaagaaagacccagaggagggcttccagatcaaggtgccccgcaggaat
gttggcccctcaactactcagctgtacatggtgaggaccatgctggaatctctcatagca
gagaagaacaccggcgggaagaagacgctgcggaaagacatcgactaccagcactttctg
gccattgataactttcacaaaaactcattcttctggtcctattgcatcaactttaatgaa
tctctacacaacagctgtaacctatcccagctctggttccgggagttcttccttgagatg
accatgggcaagaggatacagttccccatagagatgtccatgccctggatcctgacagac
catatcctggagacgaaggaatcctctatgatggagtacattctgtatcccctggacctg
tacaatgacagcgcccactacgccctgaccctcttccaccagcagttcctctatgatgaa
attgaggcagaggtgaatttgtgttttgaccagtttgtgtacaagttgagtgaccagata
tttgcatactacaagcagcttgctgcaagtatgatgctggacaagcggtttagagcagaa
tgtgccaatgctgggatcgtcatcgattttccacgtgcaaatcgatacgaaaccctcctg
aaacaacgacatgtacagctgcttggccgatcaattgacctcaatcgattggttgggcag
agaataaatgcagctttacagaaatccttggaagttgcaatctctagatttgaaggcggt
gacatcacgggcattatggaactcgacggtctcatagattgtaacaagctcacacataag
ctgttgaagcagtttctcaccctgaatgactttgacgcaatgctgcgggaggccaaccac
aacgtgtctgctccgtacggacgcacaactctccatgtgttctgggaactcaactatgac
ttcctgccaaactactgctacaatgctgccacgaacagatttgtaaagaccaactacacc
tttgtagaggccagtcagagagagaaaccaccaaatgcctctcacccatacatttggggg
acaaagacgctgacctcgtcattcagctccatctacagtcagtacgcagggtttgttggt
cccccacatttccgcgtctgctgtcgtctccttggttaccagggtatcgctgtcgttgtg
gaggaactgctcaaaattgtctctgaacagctcactggtcccctgatgaggtacacgaaa
atcctgatgagcagcatgccacagaactgccgtctgctcagatacgactacggatccccg
ggtgtgatgggttactaccaggcccagcttgccgagctgatccagtatccagacatgcgc
acagaggtgttccaactgttcagggaggttggcaatgcaatcctcttctgcctcctcata
gaacaatcaatgacccaggaggaagtgtgtgacttgaagcatgcagctcccttccagaac
atcatacctaaaccattcataccagcaaaagatggccaatctcgcaaggataaagaagag
gaactcaagactgtgatgaagcgactggagggcaagtaccaggccttgcaagtggtaccc
atcattggcaagtttgggaaccagaagcaatcaaacatagcccaagagggagacctgctc
acacgtgagcgcctgtgttgtgggctgtccatgtttgaggtgatactgaaacgtatccag
tcattcttggatgacccagtctggcatgggccgccgcccgctaacggggtcatgaatgtc
gacgagtgtacggagttccacaggctctggagtgccatacagtttgtttactgtgtgccc
gttggcgagaatgaatacaccgtagaacaactgtttggagagggacttaactgggcaggc
tgtgcaattattgtgttgctagggcaacaacggagatttgaggctctagatttctgctac
cacatcctgaaagtgaaccgggtggaccagaaagatgaaaacgtgaagggcattcaactg
aagaaaatggtggaccgaatccgcaagtttcagatcctgaacagccagatatttgcgact
ctgaacaaatacctgaagaccggtgattctgacggcatgcccgtggaacatgtgcgatgt
tttcaaccgcccatccaccagtcacttgctaccacaatatag
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