Mya arenaria (softshell): 128227182
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Entry
128227182 CDS
T09995
Name
(RefSeq) protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128227182
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128227182
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128227182
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128227182
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128227182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128227182
NCBI-ProteinID:
XP_052793417
LinkDB
All DBs
Position
3:41109818..41132860
Genome browser
AA seq
1074 aa
AA seq
DB search
MDRISRTLCVIFALCLELTMTCAETIEFRMLEENIPGIYVGNIQEKYNTNRDQLRFSLLK
DDNSPNEDLFAVDEISGNLTAVQSIDSESLCEFVIDCRVTLQIAIQTERQDGFFDVVYCD
VVIDDINDNAPTYFQDSYTLPITEAVLTGASFTFEGARDIDTSAAYSIKSYSLEPKVPGD
ALPFSVRFTTKLDGGSTVKLIVNEILDREIRDSYEFYVIAKDGGSPPKQGSLFVTVTITD
TNDQYPEFDQTSYSVRVKEEVAKDVVILTLNATDKDIGANGIVRYRLSPNQHTDHLKYFT
MGELTGQLSIKERLNSTDKKYFKLIVDAIDQGDSPLMTQTFVEVTVLDTSNSPPRIKQTL
LPNPQESYASISEYANVGAVVAYIAVEDQDSGRNGDVDCVIESNDMFNLPKYDNKEYKVT
VAKSLDREIAISHDVTVICMDKGVPPLSSEATFTVQIAEENDNAPTFRQQRYFVNMDENN
ELGDRIIIVSAFDLDSGINKIIEYSLDKKAAEYAFVDPDTGEIMANKIFDKESKDGQGFS
LTVYAKDKGEPALTGTASVLVTIHDVNDEKPVFDQGLFRFWIDENQPADSSVGRLTSKDN
DMGSHAVTRYAMKPDGTMVPFVIIEDGTIKTDRELDREERSQYTFDVMAIDVEDETLFDT
ATVTVFISDENDNGPMFEYPRRGNDTVRVLYHTTPGTVVCRVLAQDKDDPSLDNARLRYS
LQTVNSTSFFTIDASNGNIILKAPLENTDTIDKTFLLTIHVSDSGDVKHTASATLRAVIV
ADNGTLPAIVGKENKNFIIAAAVGAATVLISCGIIVTICIIRNLDSRRRRNNKGHQKALS
ENMYSRNNEEVDNIYPLPMDGDNGEKKRKGVSFSLDGQGHIEGHVDCQITQNSEDQGNRS
FDQMLLEPPPQYQQLVPPSGKLDDCHSDMSGESNGDSGKGGSDDDLQINNLSFTRDEAHR
SKDRWNNSRIPSGTELRSFPTRYSHGNNSLPRQKIVPFSFNKSTPAYNGNSLINNLSPPP
SASSYMMPTFYEDESRSSSGFHSSIDSNSNLNLNNLRSGGKITLNRGNMPDCVV
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggataggatttcgagaacgttgtgtgtgattttcgcgctgtgcctggaacttacaatg
acttgtgcggaaacgatcgaatttcgaatgttggaagaaaacattccggggatatatgtg
gggaacatccaagaaaaatacaacaccaatagggatcagctcagattttctttgctcaaa
gatgataacagcccaaacgaagatttattcgcagtcgacgaaattagcggcaatttgacg
gcagtgcaatctattgacagcgaaagtctatgtgaatttgtgatagactgtagagtcact
ctccaaatagcaattcaaacggaaagacaagacggcttctttgatgttgtttattgtgat
gtagttatagacgatattaatgacaatgctcctacatatttccaagacagctacacattg
cctatcacagaggctgttctcacaggagctagcttcactttcgaaggagcaagagacatt
gatactagtgctgcatattcaatcaaatcatactctttggagccaaaggttcctggagac
gccttgccgtttagtgtccgattcaccacgaaacttgatggaggttcaactgttaaactc
attgtcaatgaaattttggacagagaaatcagagacagttatgagttttatgttatcgca
aaggatggtggctctcctccgaagcaaggttcattatttgttactgtgacaataactgac
accaacgaccaataccctgagtttgaccagacgtcatattcagttcgtgttaaagaggaa
gttgcaaaagatgttgtgattttgacattaaacgccacagacaaagatatcggtgctaat
ggtattgtcaggtatcgattaagcccgaatcaacacaccgatcatctgaagtattttacc
atgggggagctaactggacaactctctatcaaagagaggcttaactcaacggacaaaaaa
tatttcaagctcattgttgacgccatcgaccagggtgattcgcccttgatgacgcaaacc
ttcgttgaagttaccgtcttggacacctcaaacagtcccccaaggataaagcaaaccctc
ctacctaacccacaagaaagttatgccagtatctctgagtacgctaacgttggtgccgtt
gttgcatacatcgccgtcgaagatcaagactccggacgtaacggggacgttgattgcgtc
attgaaagtaatgacatgttcaatttgcccaagtatgacaataaggaatataaagttact
gtagccaagtccttggaccgcgagatcgccatttcacatgatgtgactgtaatatgcatg
gataaaggggtgccacctttgagttctgaagccactttcactgttcaaatagctgaagaa
aacgataatgcaccgacattcagacaacagcgatattttgttaacatggatgagaacaat
gaacttggtgatagaattataattgtgtcggccttcgaccttgattctggtattaacaag
ataatcgaatactccttggataagaaagctgctgagtatgctttcgtcgacccagacaca
ggagaaatcatggccaacaaaatatttgacaaagagtctaaggacgggcaagggttttca
ttaacggtttacgccaaggacaagggggaaccagcccttacaggcacggcgtcagttctg
gtcaccatacatgacgttaatgatgaaaagcctgtctttgaccagggactgttcaggttt
tggatcgacgagaaccagcccgcggactcctctgttggtagactgacatcaaaggacaac
gatatgggaagccacgccgtcacaagatatgccatgaagcctgatggcacaatggtccct
tttgttatcattgaagatggaactatcaagactgatcgtgagcttgaccgcgaagaaaga
tctcaatacacctttgacgtcatggcgattgacgtcgaggatgagactttgtttgatacg
gcgactgtgacggtgtttatttctgatgaaaatgataatggaccaatgtttgaatatcca
cgtcgtggaaatgacacggtacgtgttttgtaccataccacacctggaactgttgtttgt
cgcgtattagctcaggacaaagatgatccatcattggataatgccagattacgttactca
ttgcaaacggtgaactctaccagtttttttaccatcgatgctagtaatggaaacataatt
ctgaaagctccactagaaaacactgatactattgacaaaactttccttttgaccattcac
gttagtgactctggtgacgtcaaacacacggcatcagcgacgttacgcgccgtcattgta
gcagataacggtactttaccagctatagtgggcaaagaaaacaaaaacttcatcatcgcc
gctgctgtcggcgctgccactgtcctaatttcctgtgggatcatcgtcacaatctgcatt
atccgtaaccttgactctcgacgacgtcggaacaacaaaggccaccaaaaagccctgtcc
gaaaacatgtacagcagaaataatgaggaagtagacaacatctacccgttgcccatggat
ggcgacaacggggaaaagaagcgaaagggggtcagcttctccctggacggtcaaggtcac
attgaaggtcacgtagactgccagattacacagaactccgaagatcagggtaacagaagc
ttcgaccaaatgctactagagccgccaccacagtaccagcagttggttccaccgtcgggg
aagcttgacgactgccactcggacatgtcgggagagagcaacggcgacagcggcaagggc
ggcagcgacgatgatctccagataaacaacctatccttcaccagggatgaggctcaccgc
tcaaaagacagatggaacaacagtcgaattccgtccggtacagaactgaggtcatttccg
acacgctactcacatggcaacaattcccttccgcgacagaaaatagttcccttctcattc
aacaagtccacgccggcatacaacggaaacagcttgataaacaacctatcgccaccgccg
tcggcatcttcatacatgatgccaacattttacgaagacgagagtcggtcttcgtctggg
tttcatagcagtattgactcaaattcaaatttgaatttgaataatttgagaagtggcggg
aaaataactttgaaccgaggcaatatgccggactgtgtagtgtga
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