Mya arenaria (softshell): 128227255
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Entry
128227255 CDS
T09995
Name
(RefSeq) protocadherin-20-like isoform X1
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128227255
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128227255
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128227255
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128227255
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128227255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
MOV-10_Ig-like
TMEM154
Protocadherin
UPA_2
Motif
Other DBs
NCBI-GeneID:
128227255
NCBI-ProteinID:
XP_052793572
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All DBs
Position
3:complement(14567312..14591474)
Genome browser
AA seq
1157 aa
AA seq
DB search
MAPLVYMLVGVFVCASAQESTVNYSLREEQDAFTYVGNVARDSQLYGNVTMEVFQRMKFQ
LLTQGNEYAAMFSIDESASTLRTAVQLDREVICPDSIECVLVFNVAVYLKDSITSVLDLY
KIIKIEVTIDDINDNAPEFPNDEVTIVISENSGVETEHFTNGAIDLDRGANNSVQTYVMQ
PPNEMFGLKVLENGDGTTDLNIVVKYPLDRESRHFYQLVISAIDGGSPPRTGSVKINITI
SDQNDNSPVFSKSLYNVTVEENIPVNSTIVHVNATDADAEDNGLVAYRFSSRTSSKITDV
FDINSESGEITCKSVLNFEDDQKWTFKVEAFDSGSPAKTSTVSVIINVLDINDNYPQINI
NLPPGGTKISEAASPGSFVAHVAVFDLDNAGQKEISCMVIGDDFRLEDFKLKNNYKVIVN
KPLDHEVRDSYEVTIECSDNGVPPNKNDTSFIVKVEDVNDNFPEFKKDTYELTIQEEVFQ
SMIVKVEATDKDFGNNGKIIYKLEPGSDQRFTVNSNTGLVTANSVFDRETDPRIILHVLA
VDAGDPALSSTATVVINITDINDNAPRFSSNPLNILIMESEPFQSVNLNVTDPDLGLNGQ
FTLTFPKNDYLAEYFEFNSVTGEIKTLKAIDRELIPYFKFWVSAVDNGIPQRSSSAEVVL
HIIDRNDNIPAITYPNNSNNTKAIPILAPVGFVIATVQASDKDDGLNAQLLYFIDMGDTR
EIFKMDVNTGRITVGREMTELDADTYKLEIAVRDNGEPQRTAMATLKVTVEPANATVSPL
VEEENKQNIMLVAVIVGVTTVISVSIIVSIFILCHIDKRNRGRRNQAPKHPEDRFYDIHR
VDESMSGSSNISKDSDAELIKKMKAKKEVSFSIDEDCSDVGNNSTLTNVTSFSTMKPPYL
SMDYRSSPEDTQSSAWLCNNTVSDMNKTEMYENELSGLTTSQLQGALRHIAQGGNSDRLW
LQPVREEQTKRMILRKSEDNHSTTSHDTTTSDSGRGGSEEDINSNRGHIFSESEESRQYI
YQCNNRQTDKLMPRRPPPPIPTEMYPRNISFSDDSVNANTTVVSGRKLPELSPYSMFYQT
PLKQVELFTISGRTKEAMLESQMTTPGMPYSVADIEEMSEIGQCRDDASTTTSGSYTINP
DDLCNEIDDLFFRDVIV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcacctctagtgtatatgttagttggtgtgttcgtgtgtgcatctgcgcaggagagt
acagtgaattactctctacgcgaggaacaagatgccttcacctacgttgggaatgttgcc
cgagacagccagctctatggaaacgtgaccatggaagtcttccaacgaatgaagttccag
ctcttgacccagggaaacgaatatgcagctatgtttagtattgacgagagtgctagcacc
ttaaggactgcagttcaacttgaccgggaagtcatctgcccagattccattgaatgtgtt
cttgtgttcaatgtggctgtatatttgaaggactctattacaagtgttctggatttatac
aaaatcatcaaaattgaagtaacaatcgacgatatcaatgacaatgcccctgaatttccc
aatgatgaagtgaccattgtcatttctgagaactccggagtcgagactgaacatttcacg
aatggagctattgacttggacagaggggcgaataactcagtacaaacttatgttatgcag
ccaccaaatgaaatgtttggactgaaagttctagaaaatggagatggaacaacagacttg
aacattgttgtgaagtacccacttgatcgtgaaagcagacatttctaccagcttgtaatt
tctgctatagatggcggcagtccaccgcgaaccggttcggtgaaaatcaacataacaatc
agcgaccagaatgataattcaccagtgttctcaaaatcattgtacaatgtaacagttgaa
gaaaacattccagtaaattccaccattgtgcacgtcaatgccacagatgctgatgcagaa
gataatgggctagtagcttacagatttagttccagaacttctagcaaaattactgacgtt
ttcgatattaatagtgaaagtggtgaaataacatgcaagtctgtgttgaactttgaagac
gatcagaaatggactttcaaagtggaggcttttgatagtggcagtccagctaaaacaagc
accgtatctgttataataaatgttctggacattaatgacaactaccctcaaatcaatatc
aacctaccacccggcggtacgaagatttcggaagcagctagccctggaagttttgttgct
cacgtggctgtttttgatctggacaatgcgggacaaaaagaaatcagttgtatggtgatt
ggagatgattttcgactggaggactttaagctgaaaaacaactacaaagtgattgtaaac
aagcctttagatcatgaggtcagagacagttacgaagttactattgagtgttcagataat
ggagttccacctaacaaaaatgatactagctttattgtgaaagttgaagatgtgaatgac
aatttcccagaattcaagaaagatacttatgagctgaccatccaagaggaggttttccag
tctatgattgtaaaagttgaagccactgacaaggactttggaaataatggcaaaattata
tacaaacttgaaccagggtcagatcagaggttcacagtaaattctaataccggacttgtt
acagcaaactcagtctttgacagagaaactgatcctagaattattctccatgtactggca
gttgatgctggggaccccgctctctcttcaaccgctactgttgttatcaatatcacagac
atcaatgataatgctccaaggttttcgtccaatcctctcaacatcctcataatggaaagt
gagccattccagtcagtgaatttgaacgtgactgatccagatttgggtttaaatggccag
ttcacattgaccttcccaaagaatgactatctggctgaatatttcgaattcaactcagtt
actggggaaatcaaaacattgaaggcaatagatagggaactgataccgtattttaaattc
tgggtcagtgcagttgataacggcatccctcaacggtccagctcagcagaggtggtactt
cacattatcgataggaacgataacattccagcaattacatatccaaacaactcgaacaat
acaaaggccattcccatcttagctccagtaggctttgtcatagcaacagttcaggcttct
gataaagacgacggtttgaacgctcaattgttgtacttcatcgatatgggagatactagg
gagatatttaagatggatgttaacactggacgaataacagttggtcgagaaatgaccgag
ttggacgcagatacatacaagctggaaattgctgttcgcgacaacggtgaacctcaaaga
actgccatggcaactcttaaagtcactgtggaaccagccaacgctactgtttcacctctg
gttgaagaagagaataagcagaacatcatgttggtcgcagtgattgttggcgttactact
gtgatatccgtctcgattatagtatccatcttcatcttgtgtcacattgacaagagaaat
cgtggaagaagaaatcaagcgcctaaacaccctgaggacagattctacgacatacatcga
gtggacgagagtatgtcagggtcatcaaacatctcaaaagattcagacgcagaattgatc
aagaaaatgaaggcaaagaaggaagtgagtttttcgattgacgaggattgtagcgacgtt
ggaaacaactcgaccctgaccaatgtaacgagcttctcgacgatgaaacctccatacctc
tccatggattacagatcatcacctgaggacacgcaatcatcagcatggctctgtaacaac
actgtatcggacatgaataaaaccgaaatgtacgaaaacgagctatcggggcttaccacc
agccagctgcaaggtgctctaagacacattgcacagggaggcaactctgacagactttgg
ctgcaaccagtcagggaagaacagacgaaacgcatgatccttcgaaagtcagaagacaat
cacagtacaacgtcacatgacacaacaactagcgatagtggtcgagggggtagcgaggag
gatataaatagtaacaggggacacatctttagtgaatcagaagaaagtcggcagtacata
taccagtgcaataatcgtcagaccgacaagttgatgccgcgccgtccccctccgcccatt
ccaacagagatgtatcccagaaacatcagcttcagcgacgacagcgtcaacgctaacacc
acagtagtcagtggcaggaaactccccgagctcagcccgtattcaatgttttaccaaaca
ccgctcaagcaggttgaacttttcactatcagtggtcggactaaagaagcgatgttggag
tcgcagatgaccacgccaggtatgccatactcagtggcggacattgaagaaatgagtgag
atcggccagtgtagagacgatgccagtacgacgacgtcgggaagttatacgataaaccct
gacgatctgtgtaacgagattgatgatttattcttccgagatgtgatcgtctga
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integrated database retrieval system
