Mya arenaria (softshell): 128227277
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Entry
128227277 CDS
T09995
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128227277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128227277
03036 Chromosome and associated proteins [BR:
maea03036
]
128227277
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128227277
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128227277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128227277
NCBI-ProteinID:
XP_052793615
LinkDB
All DBs
Position
3:42674905..42713125
Genome browser
AA seq
1850 aa
AA seq
DB search
MFNKPTGFASPFAAGGSTASTPGFGTGFGTTTQTASGGLFGQTNTQQPSTGLFGGNTPAF
GSQPSSGFSFGSTPASAPAGGLFAQKPAATASLFGTPTPAANTSSTFGFGSSGGFGTTTS
TANTAGLFGAAANTSGGLFGASAGGFGQQQQQQNGTSIKFNPLTGQDTMVKNGQTQTINT
KHQCITAMKEYETKSLEELRVEDYISGRKGKQAGTSGFGFAAPATTTGQTAGFFTQTAKP
AAFTSGFGTSTAGSTGGLFGQTATQPSTGGLFGQSKPGGLFGTPTAATTTQPSGFGFGTN
TSTGTGGLFGNTQQNKPLFGTATTQSTGLFGTSTSTFGQPAASTGFGGFGTAAPATGGLF
GGNKPAFGTAATTVSSGFGFGGSNTGANLFAKPFSAQSAGFGFNTAPTQASAFGATQPFG
ASKPAFGGLTTSTAAPAFSLGGNLNTGTSLFGGSTLNKPSGFGIGGTTGFAGFGATTGLG
QQQTLGGQASQAAVNPSIQIQQTLMALANSPYGDSKLFSNMPETSIKREDILKPTNPAAQ
KAILANRHKVTPRPMAKIKPKALSGNMNSSKSHIFEGLDEDDFSFGNDTFQPRKSVKKLT
LKKGGQDSTTPSRASSVSGEPANISALRDEEQFRGRSSPIAYQEERPDSRNMGALPETEN
IIRSKGISDQLPDTPNRSDMDDTIALLNARNKSGPTIEPPVIQQQSPNESVNISIISRDE
SNNEDDIVNERPMTPPPHHPAGIVLMRPGYYTIPSFEALAELVDEDGNCYVEDLTIGREG
YGSIFFPGITNITDMNFDEIVFFRRKEVIVYPDDDNKPPEGEGLNKKAEITLDCVWPRDK
SLGTPIKSPEKLQAMKWQDKIEANSLKVGARFKDYRPETGSWVFEVKHFSKYGLVDDSDD
EGEISEQEKKRLRTAQSQQVNVQKQKLRLEQQTAQAGAGLKPPVVGIKSRADGSLARFTI
GTDDEESEGSGAGGRVEVPMGDDEQIVDLAAQRRAPAAGIEGEDEMEMIDEQPSSHRLAT
SMGVDARSMQVMKASFFMDEDAPAPAFDGSMFGKKSAPPTGSPLLRGREGSGPSLFSSTL
KAKYMTPVKLGNLPKETVPEAGLYSPRLITPEPIRASSYRQEPLQPPVKEYMLLESGMSQ
HDYQKRALGSRVTKVIPTVTESVMYNKQALLVDAGLFMGRSFRVGWGPGWTLAHCGDPVQ
PREEEEERPAGTFNLFTGGQRRPASKANKAWTVHLQKVNVADHINPRDKTVIQNHCEMLE
IQLVHSRSSLEGECPVFAPTPGVEALHQYAERNQEELKNLSGHQDEDSVQHMGMVWDLCV
ALWGNLPEFKDLEVGKDSYLYHNARREAFSQWLADVSAGSISTEVQQNKYKENGQLVSVL
SAMTGRQIVEACQLAQNAGNPRLALLLAQSISNYMPRQMISKQLEEYIELGANNFINETL
LKVYSLLAGQLVLTCSGMTVNTCEGLDWKRALALHLWYCCQADAPIQEAVEIYDRSFTGT
GDYSSYCCAPLPPYLEQEGLELDREGPIWDTCYHLLSLYCRRSHPLENLLNPVTSTPSQL
DYRLSWHLGQVMESLSFRHLSSYQRASLHMNFASHLESLGLWEWAVFVALHIDNSVSREN
VVHGLLCRHVQLEGGESYMEREELLRGKLHVPTEWIHSAKALRASYENRPREEARHLLRA
GQWNRSHLVLLRHIAADDIIHENHDSLRESLVELSAPARCASILDWHTGGKVLLDYINIC
DGIKLLSQIGGDRQLYELDQLLPEVQALCTKVGSLPCRTSKDRLCQSEMAKKAANFLRLI
LTLQAEARGQPHPSVRSMAPYISNLPMPEDYVLHELHSLTRAYMMEQAVA
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaaccaactggatttgcttctcccttcgctgctgggggaagtacagcatca
acaccaggatttggaactggttttggcactaccacgcaaacggcatcaggtgggctgttt
ggccagacaaacacacaacaaccaagcactggactatttggtggaaacacaccggctttt
ggctcccagccctcttcaggatttagttttggttcaaccccagccagtgctcctgctggc
ggcttatttgcccagaaaccagcggctacagcgagtctgtttggtacaccaacaccagca
gctaatacatcaagcacgtttggcttcggcagctcaggtgggtttggcactaccacatca
acggcaaatacggcagggctgtttggtgcagctgccaacactagcggagggcttttcgga
gccagtgcaggaggatttggccagcagcaacagcagcaaaatgggacgtcaatcaagttc
aacccccttactggccaggataccatggtcaagaatggacaaacacagaccatcaacacg
aaacaccagtgtataaccgccatgaaagagtacgagactaaaagtcttgaggagttgcgt
gtggaagactacatcagcgggaggaaggggaagcaggcagggacctcaggattcgggttt
gctgcccccgccacgaccactgggcagaccgcgggcttctttacacagaccgccaaacct
gcggcatttacttctggtttcggcacaagcactgcgggtagcaccggaggtttgtttggc
cagactgcaacccaacccagcactggaggcctgtttggacagagtaagccgggcggtctg
ttcggtacacctaccgccgccaccacgacccagccaagtggctttggttttggtactaac
accagcacgggtactggaggcctgtttggcaacacacaacagaataagcctctgtttgga
actgctaccacccagtctaccggtctgtttggaacaagcaccagcacatttggccagcca
gctgcaagtacaggatttggggggttcggaacagcagctcctgccacgggaggtcttttt
ggaggaaacaagccagcatttggtacggcggccactactgtgtcatcagggtttggtttt
ggtggatccaacaccggagcaaacctgtttgcgaagcccttctctgcccaatcagcaggc
tttggatttaacacagcccctacacaagcctctgcatttggtgcaactcagccatttggt
gcatcaaagccggcatttggaggcctaactacgtcgaccgcggccccagccttcagtctg
ggaggtaacctaaacacaggaacaagtcttttcgggggcagcaccctgaataagccttca
ggctttggaatcggaggaaccacagggttcgcaggatttggtgcaactactggtcttggc
cagcagcagactctgggaggacaagctagccaggcagcggtgaacccatcgatccagatt
caacagacccttatggccctggccaactccccgtacggagattccaaactgttctccaac
atgccagagacgtcaataaaacgagaggacatcctgaagcccacgaaccctgcggcccag
aaagccatccttgccaacaggcacaaggtcacacccaggcccatggcaaagataaagccg
aaggccctgtcaggaaacatgaacagtagcaagtcacacatattcgagggactggatgag
gatgacttcagttttggtaacgacacgttccagccaaggaagagtgttaaaaaactgaca
ctgaagaaaggtggtcaggactcgaccactccgagtcgagcctcgtctgttagtggagaa
cccgccaatatatcagcactcagagatgaggaacagttccgaggaaggtcgtcaccaata
gcataccaagaggagagaccagacagtagaaacatgggagccctcccggagactgagaac
attattcgtagtaagggcatctccgaccagcttccagacacacccaacaggtcagacatg
gatgacaccattgccctcttgaacgcccgtaacaagtctgggcctactattgagcctcca
gtcatccagcagcaatcgcccaatgagtcggtcaacattagcatcatctccagagacgag
tccaacaatgaagatgacatcgtcaatgaaagacctatgactccccctccacaccaccca
gcaggcatagttctgatgcgccctggctactacaccatccccagctttgaagccctggcg
gagcttgttgatgaggatggcaactgttatgtggaggacttgacaatcggccgtgagggg
tatggatctatattcttcccaggaatcaccaacatcaccgacatgaactttgatgaaata
gtgtttttccggcgtaaggaggtgatagtgtacccagatgatgacaacaagcctccagag
ggggaggggctgaacaagaaggctgagatcacccttgactgtgtttggccacgtgacaaa
tccctcggcacaccaattaaaagcccagagaagctccaagctatgaagtggcaggataag
atagaggccaactccctgaaggtcggggcacgcttcaaggactaccgacctgagacgggc
tcatgggtgtttgaggtgaagcatttctccaagtatggtctggtagatgattctgatgat
gaaggggaaatctccgagcaggaaaagaagcgcctccgtacggcccagtcccagcaggtg
aacgttcagaagcagaagcttcgtctcgagcagcagacggcccaggcaggagccgggctc
aagcccccagtagttggaatcaaaagtcgcgctgacggaagtcttgcccggtttacaatt
ggcactgatgatgaggaaagtgaaggaagcggggcaggtggccgggtggaggtgcccatg
ggtgacgatgaacaaatagtagatttagccgcccagagacgggctcctgcagctggcata
gaaggtgaagatgagatggagatgatagatgagcagccctcgtcccatcgtctggcgacc
agtatgggagtagacgcccgcagcatgcaggtcatgaaggcctcattcttcatggacgag
gacgcaccagcacccgcattcgatgggtcaatgtttggaaagaagtctgccccacctaca
ggctccccacttctacgagggcgtgaggggagtggacccagtctgtttagctccaccctg
aaggcgaagtacatgacccctgtcaaactgggtaacttgcctaaggagacagtgccagaa
gcaggcctatattcaccacgattgattacccctgagcctatacgagccagcagctatcgg
caggagcccctccagccgcctgtgaaggagtacatgctcttggagagtggaatgagccag
cacgactaccagaagcgggcgctgggctcccgggtgaccaaggtcattcccacggtgacg
gagagcgtcatgtacaacaagcaggccctactggtagacgcagggttgtttatggggcgc
agtttccgggtaggctggggaccaggttggaccctcgctcactgtggggaccctgtacaa
cccagggaggaagaggaggaaaggccagcaggtacatttaacctgttcactggaggtcag
cgacgaccagccagcaaagccaacaaggcttggaccgtccatctacagaaggtcaacgtg
gcagatcacataaacccacgtgataaaacagtcatacaaaatcactgtgagatgttagaa
attcagctggttcactcacggagcagccttgagggggagtgtccggtgtttgctcccacc
ccgggggtagaggccctgcaccagtacgcagaaagaaaccaggaagagctgaagaatctt
agtggtcaccaggatgaggacagtgtgcaacacatgggcatggtctgggatttgtgtgtg
gccctgtggggaaacctccccgagtttaaggacctagaagtaggtaaggacagctacctg
taccacaatgcgagacgagaggcgttctctcagtggctggctgacgtgtctgcaggcagt
ataagtacggaggtgcagcaaaacaaatacaaggagaacggtcagttagtcagtgtcctg
agtgccatgactggtcgtcaaatcgttgaagcatgtcagctcgcccagaatgcgggaaat
ccccggctggccctgctgctggcccagtccattagcaactacatgcccagacaaatgatc
tctaaacagcttgaggaatatattgaacttggtgctaacaacttcatcaatgagacactg
ctgaaggtgtacagcctgctggcaggtcagctcgtgctcacgtgcagtgggatgacagtc
aacacgtgcgaggggctggactggaaacgtgcgcttgccctccatctttggtattgctgt
caggctgatgccccaatccaggaggccgtggagatttatgaccgctcattcaccggcaca
ggtgattactcgtcatactgctgtgcccccctgcccccctaccttgaacaggaggggctg
gagctggacagggaggggcccatctgggacacgtgttaccacctgttgtccctgtactgt
aggcggagtcacccgctggagaacctcctgaaccctgtcacctccacacccagtcaactg
gactacaggctcagctggcaccttggtcaagtaatggagagcctttccttccgtcatctg
tcatcctaccaacgggccagtctccatatgaactttgcctcccatcttgaatcattgggg
ctgtgggagtgggcggtctttgtggccttacacatcgacaattctgtcagtcgtgagaat
gttgtacatggcttgctgtgtcggcacgtgcaactggagggtggggaatcgtacatggag
agggaggaactgctgcgaggcaagctgcatgtacccactgagtggatacacagtgctaag
gccctgcgtgcgagttatgagaaccggccgagagaggaggcacgtcatttgttgagggca
ggacagtggaacagaagccatctagtgctgctcaggcacattgctgccgatgatatcata
catgagaaccatgattccctgcgcgagtctctggtggagttatctgctcctgcccgctgc
gcgagcattctcgactggcacacaggcggcaaggtgctcctagactatatcaacatctgt
gacggcataaaactactctctcagattggaggtgaccggcagctgtatgagttggaccag
cttctaccagaggtgcaggccctgtgtaccaaggttggctctctgccatgtagaacttca
aaggacagactatgtcagtcagagatggccaagaaggcagccaacttcctacggctcatc
ctcacactacaggctgaagccaggggtcagccccacccctctgtcagatcaatggcgcct
tatatcagcaaccttccaatgccagaggactatgttctacatgagcttcacagtctcaca
agagcatatatgatggaacaagccgtagcttga
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integrated database retrieval system
