Mya arenaria (softshell): 128227372
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Entry
128227372 CDS
T09995
Name
(RefSeq) cyclin-dependent kinase 7-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
maea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128227372
09124 Replication and repair
03420 Nucleotide excision repair
128227372
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
maea01001
]
128227372
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128227372
03019 Messenger RNA biogenesis [BR:
maea03019
]
128227372
03400 DNA repair and recombination proteins [BR:
maea03400
]
128227372
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
128227372
2.7.11.23 [RNA-polymerase]-subunit kinase
128227372
Protein kinases [BR:
maea01001
]
Serine/threonine kinases: CMGC group
CDK family
128227372
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128227372
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
128227372
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128227372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
128227372
NCBI-ProteinID:
XP_052793792
LinkDB
All DBs
Position
3:37077692..37118772
Genome browser
AA seq
341 aa
AA seq
DB search
MDDRTKRYEKIDFLGEGQFATVYKARDVVKDQIVAVKKIKLGTRQEAADGINRTALREIK
LLQELHHPHIIGLLDVFGQKSNVSLVFDFMETDLEVIIKDSSLILTLAHIKSYILQTLKG
LEYLHANWILHRDMKPNNLLINKDGVLKLGDFGLAKFFGSPNRVYTHQVVTRWYRCPELL
FGARNYGTGVDMWAVGCILAELLLRIPFLPGETDLDQLSKIFQCLGTPSKDDWPSVESLP
DFVQFKPCVGTPLKEIFIAASDDLLDILHGLLTFDPLTRLTAPNALQSEYFRSKPYPTPS
HLLPQLKNNKKEVMDQCRPSLKRKMEGEQSSCTGLVKRLVF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagaacaaaacgatacgagaaaattgatttcttaggagaaggacagtttgct
acagtatacaaagctagagatgttgtaaaggaccaaatagtagctgtgaagaagattaag
ttgggcacccgacaagaggcagctgatgggatcaacagaacagctcttcgagaaatcaag
cttctgcaggagcttcaccacccacacattatcgggcttctggatgtttttggtcaaaag
tccaatgtcagtctggtgtttgatttcatggagacagacttagaggtgattatcaaagac
agcagtttgatcctgacattggcccacatcaaatcttacatattacagacacttaaaggc
cttgagtacctccatgccaactggatattacacagggacatgaagccaaacaacttgctc
atcaacaaagatggggtgctaaaacttggcgattttggcttggcaaagttctttggctcg
cctaatagggtatatacacaccaggttgtcacaagatggtatcgctgcccagagctgctc
tttggtgctaggaactatggtacaggagtggacatgtgggcagtgggctgtatcctggcg
gagcttctgctccggatcccattccttcctggagagacggacctagaccagctgagcaaa
atcttccagtgtctcggcacaccgtccaaggatgactggccgtctgtagagagtctgcca
gactttgtgcagtttaagccatgtgtaggaacgccccttaaggagatatttatagctgct
tctgatgacctccttgacattctgcacggcctgctgacatttgatccactgacacgacta
acagccccaaatgcactacagtcagagtattttcgtagcaagccgtaccccacaccaagc
cacctcctgccccaactaaagaacaacaagaaggaagtcatggaccagtgtcgacctagc
ctcaaacgcaaaatggagggagaacagagttcatgtacaggtcttgtgaaaaggctggtg
ttttaa
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