Mya arenaria (softshell): 128227375
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Entry
128227375 CDS
T09995
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128227375
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
128227375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Vma12
CemA
Motif
Other DBs
NCBI-GeneID:
128227375
NCBI-ProteinID:
XP_052793795
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All DBs
Position
3:29624857..29641380
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AA seq
934 aa
AA seq
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MDGTPLKEIPATCFICLENKRFYSIKGKNATEDAIIQKLSSISEYKSMSDVPAYLKGRGR
GRGLTGPKQPAPHHNGPGRGMGTGKQTNKGPVTMERSVPTAAPSAEERFQSASEQNQESI
KRHLGENSAAVDDLSDEEDDLDAGVLQKVFQTYTVSEGDDLNIGAAQDNLLHSFRSGTSA
CLVCIDAIKKTDPIWSCEGCCAIFHIQCIQKWVKDGVYHQIYKSEDDNLRPESIPWHCPK
CRLEYDQRRCPTRYLCYCGKVEEPQFDPWLVPHSCGATCGRPLKPDCGHTCLLLCHPGAC
PPCPKTVRVGCHCGKAAPQVRRCSARPWSCTGVCGRRLTCGQHTCQQTCHSGECSPCPMT
SSQRCQCGKSSSVRPCASPDWQCDQVCGKRLSCGNHVCESVCHRGPCGDCPRGGVRKCPC
GKTEYDKPCTEDIPTCGDTCGKLLACGIHSCVQRCHYGSCGSCLQMCVKRCRCSQGKERE
VTCSKDFLCETKCTKMRDCAKHQCKRKCCDGNCPPCEQMCNKPLTCKYHKCSSRCHRGRC
YPCMETVDMFCSCKATKITVPCGREKVTKPPRCNHPCKNPPDCHHPERIKHRCHFGECPT
CRQVCHKQLPNCSHVCPASCHTAVKVKYKDNKKRAGPWEGGPRIIEQVVDRPCPPCMVPI
AIQCYGMHETGSFACSVVKPYSCGRQCGRNLICGNHTCSRMCHVVEGSQEPVMAGTNCQK
CELGCQFERPEGCTHPCQKPCHQDACPPCTQMFRMRCHCQASIRHVECYKWVASSDSKKE
EMKTCGGPCPKVLSCGHQCSLLCHPGACSRADQCERKVTVKCKCKRQKRDVKCRDSNKEK
AQLQCDDKCKQEIQRKKQIEDEAAKQQAAEEEKKRQAELEEYERKMKGRRRKQRKHAEVE
VEERFLTRNRTAILTISASVLCLAVFVYYIMTVV
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacacctttaaaagaaattccagcaacatgtttcatttgtttagaaaataaa
cgattttattccataaaaggaaaaaatgcaacggaagacgcaatcatccaaaaactaagt
tcaatatcagaatacaaaagtatgtctgatgtgccagcatacctaaagggccgtggaagg
gggagaggattaacagggcctaaacagccggccccacatcacaatggcccagggagaggg
atgggaacaggcaaacagaccaacaaaggtccagtcactatggaaagaagtgtgccaact
gcagcaccatcagctgaggagcgtttccagtcagccagtgaacagaatcaggagtcaata
aagcgacatctgggagaaaacagtgcagctgttgatgacctttctgatgaagaagacgac
cttgatgccggagtgttgcaaaaagtcttccaaacatatactgtatctgaaggagatgat
ttgaacattggtgctgcacaagacaatctgttacattcgttcaggtctggaacatcagcc
tgccttgtttgtatcgatgccataaagaaaaccgacccaatttggagctgtgaaggatgt
tgcgcaatctttcacatccaatgtatccagaagtgggtgaaggatggtgtgtatcatcag
atatacaagtcagaggacgacaatttgaggccagaaagcattccttggcactgcccaaaa
tgtcgcctggagtatgaccagcggcgatgcccaacacggtacctgtgttactgtgggaag
gtggaggagccccagtttgacccctggttggtgccccactcatgcggcgccacctgcgga
cggccccttaaaccagactgtggacatacatgcctcttgctctgccatccaggtgcttgt
cccccttgtccaaaaactgtaagagttggatgtcattgcgggaaggctgcgccccaagtt
aggaggtgcagtgcccgaccctggtcatgtaccggagtgtgtggacgcagactaacatgt
ggccagcacacctgtcaacaaacttgtcactccggtgagtgcagtccatgccctatgaca
agttcacagcgttgtcagtgtggtaaatcatcaagtgtgaggccttgtgctagcccagac
tggcagtgtgaccaggtatgtggtaagcgtttatcctgtggtaaccatgtgtgcgagtcc
gtgtgccacagagggccgtgtggagactgtcccaggggcggagtgaggaaatgcccttgc
gggaaaactgagtatgataagccgtgtacagaagacatccctacctgtggggacacgtgt
ggcaagttgcttgcctgtgggatccactcctgtgtacagaggtgtcactatggctcatgt
ggcagttgcctgcagatgtgtgtgaagcggtgcaggtgttcccagggcaaggagcgtgag
gtgacgtgtagcaaggacttcctctgtgaaaccaagtgtactaagatgagggactgtgct
aaacatcagtgcaagagaaagtgctgtgatgggaactgcccgccctgtgaacagatgtgt
aacaaacctctcacctgtaaataccacaaatgtagcagtcgctgtcacaggggtcggtgt
tacccatgcatggagactgtggacatgttctgttcctgcaaagcgaccaagatcacggtg
ccatgtgggcgagagaaagtcactaagcccccaagatgcaaccacccatgcaaaaatccc
ccagactgccaccatccggagaggattaaacaccgatgtcactttggggagtgtcccaca
tgtcgccaggtctgccataaacagctgcccaattgttcgcacgtttgccctgcatcctgc
cacacggccgtcaaggtcaagtacaaagacaataaaaagcgtgcgggtccgtgggaaggt
ggccccaggattatagaacaggtggtagatcgaccgtgccctccctgtatggttccaatc
gctatacagtgctacgggatgcatgagactggcagttttgcatgttcagtggtgaagccg
tactcctgtgggcgccagtgtggcagaaacctgatatgtggcaaccacacatgttcccgt
atgtgtcatgtggtggagggctcacaggagccagtcatggccggcaccaactgccaaaag
tgtgagctgggctgccagtttgagcgccctgagggttgcactcatccatgccaaaagccc
tgccaccaggacgcctgcccgccctgcacccagatgttccgaatgcgctgtcactgtcag
gcctccatcaggcatgtggagtgttacaagtgggtggccagttctgacagcaagaaggag
gagatgaagacttgtgggggaccgtgtcctaaagttctgtcatgtggccaccagtgcagt
ctgctgtgtcatcctggtgcgtgttcccgtgctgaccagtgtgagcgaaaagtaacggtc
aagtgtaaatgcaagagacagaagcgtgatgtcaagtgtcgggacagcaataaagagaag
gcccaactgcaatgtgatgacaagtgtaaacaggaaatacaaagaaaaaaacagatagag
gatgaggcggcaaaacagcaggcggcagaggaggagaagaaacgccaggctgagcttgaa
gagtatgaacgcaagatgaaggggcgtcgccgcaaacaacgcaaacatgctgaggtggaa
gtagaggagagattcctcacccgaaacagaaccgccatcttgaccattagtgccagtgtg
ctttgcctagctgtctttgtctactatataatgactgttgtttga
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