Mya arenaria (softshell): 128227437
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Entry
128227437 CDS
T09995
Name
(RefSeq) protocadherin-18-like
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128227437
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128227437
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128227437
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128227437
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128227437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Cadherin_4
TMEM154
Fn3-II_PB4
Orf78
EphA2_TM
SLC52_ribofla_tr
Comm
Motif
Other DBs
NCBI-GeneID:
128227437
NCBI-ProteinID:
XP_052793934
LinkDB
All DBs
Position
3:complement(49999511..50053286)
Genome browser
AA seq
1122 aa
AA seq
DB search
MEGTVLRCELCLALIAVMFAVTYGQNYHVSFSIPENRPLDTYIGNVSSNAQFVDQIPPEE
LGHIRYAFLKQTHIQSLISLDETSGILYTLVVIDRESPDVCLSQPLCSLEFSVAVRSVRP
QSSFFALIDVTVNIQDINDNRPRFPHDMLNLEVSESATVGTSFHIERAIDNDSGNFSVQS
YEIGQQDGDFGLDVVKKLDGSFTVKLVLQSPLDREIKDRYSVLIVAWDGGDPRKFGTLTV
NISVTDVNDNSPVFVDSSYNVTLRENRTVGAPFLQISAVDRDIGENGRITYQFSQNQFDN
RVNEFFTVSQDTGQLELKKKLVYDNHDYTIIAEAVDHGDQPHVTQVRITVQIVDVGNNPP
ILEVNLLGQENSKIVNISESSSPGTFVAHINVIDSDTGDNGRVECAISDRKFDLQKMGAK
GYKVIVREELDREKQDLHQILVSCHDFGTPPLTASSSFLVSVTDINDCAPIFTQPVFTGT
IPENHHEFRTFVQIIAFDEDLGDNGKVKYYIDQESTSKKFWINETDGSLRADQVFDREKD
QMIIFKVIAKDQGNRSLASTAMVKVTIGDKNDNAPVIQEPLTFSIMENKNSDSFVGTLRA
TDADIGENERTMFLIHPDFEYTVPFVVFPDGNIKTNRQLDREVQSKYEFKVVVVDQGTPR
MKSNAVVTVYVNDTNDNPPTMKFPREKNNTAVVFSDVNPGHKVAQVEAEDPDEDFNTIVS
YDITAGNSEDLFIIDNKFGGIYLTRKVSITHNKTINLKIAVKDGGHPQHTTESDLNIILV
RAVNSSSGMQEGESNGNTLIVVIVVVLTAVLSVVMIIVICFLRRFDHRSKTRRNLDIVAP
DEKYPKCYMEDSTRYLDPNNTSHDHLTSTYDPMSPISPQRKKEVSFDIEDQMDHCDLRDH
HNTTMSTFSVPESEKFQGVSGCDDGEECTPGGDGGRLNTLQLLQYHQAVLESQTRAWLQT
HDGHEESSSFDVTLPEDKYSDTSEEVTASDSGKGGSEDDIPSNHSKDLKQRINGPSTQPG
NKFQTHHYVAPEFRRQGSLQRKACDITLDGCRVGSPGSSLGEELPCHPDSRVGRPESRAS
ITHSTPRPNSRAAKYYPGDSMANRTIDSAIENSGEWDAASYV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaacagtacttagatgtgaactgtgtttggctctcatcgcagttatgttcgct
gtgacttacggtcaaaattatcatgtatctttttccatacctgagaataggcctttggac
acctacatcgggaatgtatccagcaatgctcagtttgttgaccaaatacctcctgaagag
ctcgggcatatcagatacgcatttcttaaacaaacacatatacagtcactgatcagtttg
gatgaaacttcgggaatattatacacgctagtcgttatcgaccgtgagtctcccgatgtt
tgtctgtcacagccattgtgttcactagagttcagcgtagcagtcaggtcagtacgacct
caaagctcatttttcgccttaatcgatgtcactgttaacattcaggacattaatgataac
agaccacgatttccacatgacatgcttaatttagaagtctcagagtctgctactgttgga
acatcattccatattgaaagggctattgataatgattccggaaacttttctgttcagtct
tacgagatcggacaacaagatggtgatttcggactggacgttgttaaaaaacttgatggc
agctttacagttaaactggtgctacagtctcccttagatagagaaataaaggacagatat
agtgttctaatagttgcatgggacggaggtgacccaagaaaatttggaacactaacggtg
aatatttctgtaacagatgtcaatgacaacagccctgtgtttgtagacagcagttacaat
gtgacattgagagaaaacaggacagttggtgctccgttcctgcagatttcagcagttgat
agagacatcggtgaaaatggtcgaatcacataccagttcagtcaaaatcagtttgataac
agagtgaatgagttttttactgtatcacaagacactgggcaacttgagctaaaaaaaaaa
cttgtctatgacaatcatgattatacgataatcgcagaggcagtagaccatggcgatcag
ccccatgtgacccaagtgagaatcactgttcaaattgttgatgttggaaataacccaccc
attctcgaggtaaatcttctcgggcaagagaactctaaaatcgtgaacatatccgagtca
tcgagccctggtaccttcgttgctcatatcaatgttatcgacagtgacactggtgacaat
ggtagggtggagtgtgcaatttcggacagaaagtttgaccttcagaaaatgggcgctaaa
gggtataaggtgattgtgagagaggaactggacagagaaaagcaggacttgcaccagatt
ttagtgagttgtcatgattttggtactcctccgcttacagcatcttcaagttttctagtt
tcggtgactgatataaatgactgtgcaccaatattcacccagcctgtttttactggaacc
atacctgagaatcaccatgaattcagaacatttgtgcaaatcatcgcattcgatgaagat
cttggtgacaatggtaaggtgaagtattatattgatcaagagagtacaagcaagaaattt
tggataaatgaaactgatggaagtctaagagccgatcaagtgtttgacagagaaaaagat
caaatgataattttcaaggtcattgccaaagatcaaggcaatagatcccttgctagcaca
gccatggttaaagttaccattggtgacaaaaatgacaacgctccagttattcaagagcca
ctaacgttcagcatcatggaaaacaagaattcggattcatttgtcggaactctaagagca
acagatgcagatataggagagaatgaacggacaatgttccttatccatccagattttgag
tatacagtcccttttgttgtttttcctgatggtaatattaaaacaaacaggcaactggac
agagaggttcagagtaagtatgagttcaaagtggttgtagttgaccaaggcacaccaaga
atgaaaagtaacgctgtggtcacagtgtatgtaaatgatacaaatgataatccgccaaca
atgaaattcccaagagaaaagaataacacggccgtagtgttcagtgatgttaacccgggt
cacaaagttgcacaagtagaggctgaagacccagatgaagactttaatacaattgtctcg
tatgatatcactgctggaaactccgaggacttgtttataattgacaataagtttgggggg
atttacctcaccagaaaagtctcaattacacataataaaaccattaacttgaagattgcc
gtgaaagatggtggacatccacagcatacaactgagtctgacttgaacatcattcttgtg
cgagctgtgaattctagctcaggtatgcaggagggagaaagtaacggaaacacgctcatt
gttgttattgtcgttgttctgactgcagtcctctcggtggtcatgatcattgtgatctgc
ttcttgcgaaggtttgatcatcgtagcaagacccgtagaaatcttgacattgttgcgcca
gacgagaaatacccaaaatgttacatggaggactcaacgcgttaccttgaccccaataac
acaagccacgatcatctgacctcgacctatgacccgatgagtcccatatcgccacaaaga
aagaaggaggtcagtttcgacattgaggaccagatggaccattgcgacttgcgcgatcat
cataacacaaccatgtcaacattttcagtgcctgaatcagaaaagtttcagggagtgtcc
gggtgtgatgacggggaagagtgtacaccaggtggggacgggggtcgtctcaacaccctc
cagctccttcaataccaccaagctgtccttgaatcacaaacacgggcctggctccagaca
catgatggacacgaggagagcagcagttttgatgtgacgttaccggaagacaagtacagc
gacacgtcagaggaggtgacggccagtgacagcgggaaaggaggcagtgaggatgatatc
ccgtccaaccactcaaaagaccttaaacagagaatcaatggcccatcaacacagccaggg
aacaaattccagacgcaccactatgttgcgccagagttccgacggcagggcagtctacag
cgtaaggcatgcgacatcacgctcgatggctgcagggttggctcccctggtagttctctc
ggggaagaactcccctgtcatccagacagtcgggtaggacgtcctgaaagtcgtgccagt
attacacattccacaccccgcccaaactctcgtgcggctaaatactaccctggtgactcg
atggcaaatcggactattgatagtgctattgaaaacagtggtgaatgggacgctgcatca
tatgtgtga
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