Mya arenaria (softshell): 128227482
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Entry
128227482 CDS
T09995
Name
(RefSeq) sodium channel protein 1 brain-like isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
maea
Mya arenaria (softshell)
Pathway
maea04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128227482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maea04040
]
128227482
Ion channels [BR:
maea04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128227482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
IQ_SCN5A_C
IQ
DUF4834
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
128227482
NCBI-ProteinID:
XP_052794031
LinkDB
All DBs
Position
3:complement(70925719..70978374)
Genome browser
AA seq
2083 aa
AA seq
DB search
MTTNEEHGSKEVTPKPEEEDSDDDDEDLLVFTPYTAASWDEQLDSEKNRHDKEVENKKHQ
GEAHLVDGELQFVSEEHHGHQETRNPNLVEGNTLKEDIEPEFPKDLYGKPVEEFDKLIKE
RDKTFCVVGPRFKREYIYRFSATPSFYVLRPWNPFRKFCVYIATSQYFDYFIILTILANC
IFLAMPNEPASETAEYVFLGVYTLEMIIKLSARGFFINSYTYLRDAWNWLDFIVIVSAYF
TIVLENTGGQSSLGNLQGIRTFRVFRVLRTISIIPGLKTIVNALLRAFRMLLEVMMLICF
CLMVFALFSLQIYMGSLRQKCVTNLNYSLASPPAYTYDQYFNDHTKNSFNWYMEGEYLCG
NTSGAQSCPDGYTCFGDIGENPRWGFVSFDHFGWAMLTSFQLMTLDFWEDTYNKVLQTSG
PLNVIFFILVIFFGSFYLVNLMLAVVAMSYEQESEAAGKSKGRGMRMFRPYEDEKESDAK
APEEKAKEIKNKERNKKRKKKKEKEKKEKDALRDLANEQSNDKNKHDHHKKHPDDADYDD
PWIHLRHETTNAVRAAVEMAYPSNHASKKIPTSSTARPLGNPNHVSQTDNKDSKHIKRNP
MVKMASKDSGTGNSVESSRSNGSKDEYTLMEDGSYPGSTIDIIKRDSRLPTKKPLLKQQS
TGMVSSSGVTLSPYRVEENNTDHLTFDGPNDYDNTDDTNTNAMEEESPGRKYVREKYPHL
TIVDVGDGDPYIEREEDQVVNRNCNSCYNVCGGRLFVGWLWYQQFCFTIISEPMFDLFII
VCITLNTLFMSLEHYPQTDTFSDVLSVANYIFSTVFILEAVLKLSALTKHYFKNSWNIFD
LVIVVISIFDLTLTNVDGLSVIRIFRLLRVFKLAQSWGTMRLLLSIIMNTLGALGNLTLI
LLIVIYIFAVVGLQLFNDKYTPDKFDGEVIRWHFKDIFHAFMMIFRVLCGEWIEPLWDCM
RAADELCMAVFLPTLVLGYFIVLNLFLALLLNAFASDTLREAKESSDENDKLKLAFSRLY
NLFCCCLKKKNGANAVSPDTDEDGNEVVQIKDLKVQEEKESLPAIKNGVDKKTSNGLSNK
DSKNVDKAFATKRDQFDDFAKTMQDSKGDKTGKPAEVETTKDTVKILNEQDGEEKKKEEG
VTYYTVPKKTKQVKTGKDKNKVDTSLNVPRKDQDDMELGAEASTIKKDAKKHDGEEEEED
KVIEVHACWPVFCAKRFEAKNRCVCCWLHNDSTFWDKWFKLRVFMNIVVDHKIFEGIILL
SIAVSSITLAFEDVNLYKNIVMQQALYWLNLLFAVIFGVEMFMKWIAFGFKKYFTSFWCL
LDFVIVVISVASIVAEAYGAANLSAFRSLRTLRALRPLRAISRWQGMRIVVNALMMAIPA
IMNVLLVCLLFWLIFSIMGVQFFRGKFYKCLDSNGDKLSNEVVANKAECLAMEASHGYKW
ENSPINFDNVFSGFLALFQVATFEGWMEVMEDAVDSADIDEQPSFENSLYSYLFFVAFII
FGAFFTLNLFIGVIIDNFNMLKKKYDGNYLDMFLTSGQRQYYNTIKKLGNKKPQKTIKRP
KYRWVWLNKIQGVFYDIAISSKFELCIVIVIFLNMIQMAVDHYGQTQAVTDVLSMLNMLF
VVIFTLEAIVKIIGLRWHYFTQPWNIFDFVVVIISLLGIILSDIMSNVIVSPTLLRVVRV
FRIGRVLRLIRAAKGIRKLLFALIISLPALLNIGMLLFLIMYIYAIICLSQFQNLKIEDP
LDEDVVNFRTFGNSFLLMFRLSTAAGWNDILGAMMIAPPNCNNTHYQQGDEWIENSPGNC
GTSWLAVFALTTYILIIFLVVINMFIAVILENFNQAHEQEEVGITEDDFDMFYAIWERYD
PLATQFIKYEQLSNFVADLEPPLGISKPNEIALVSFDLPITEGDKLHCLDVLMALVRYVL
GNVEESDEFRQLHEQMEQKFQSAFPTRVNTTKKTTTMMRKKEDVAAKTLQRAWRSWKAQK
QMKNIATLAMQQKNQSKSGTSIEPRNKNSSIRNLGTRLTTALSAFFSSSRPSSAVSQLSI
KSSNPSIAENNASTSKQKKAQSAMNMPNVSTLYGPGRDNDIEL
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaatgaggagcacggttccaaggaggtgacgccgaaaccggaagaagaagac
agcgacgatgacgacgaggatctgctcgtgtttaccccgtacacggccgcctcatgggac
gagcagctggattcggagaaaaaccggcacgacaaggaagtggagaacaaaaaacaccag
ggtgaagctcacctcgtagacggcgagctccagttcgtctccgaggagcaccacggccac
caagagacgcgcaacccaaatttggtggagggaaacactctcaaggaggatatagagccc
gagtttcccaaggacctgtacgggaagcccgttgaggagttcgacaagctaatcaaggag
cgagataagacattctgtgtggttggcccccgtttcaagcgggagtacatctatcggttt
tctgcaaccccctcattctacgttctccggccatggaacccgttcaggaagttttgtgtg
tacatcgccaccagtcagtatttcgactacttcatcatcctcacgatcttggctaactgt
atattccttgcaatgccaaatgaacctgcttcagaaacagctgagtatgtgttcttagga
gtctacacacttgagatgataatcaagctttccgcccgtggttttttcatcaactcgtac
acgtacctcagagacgcatggaactggctagattttatagttatagtatcagcgtatttc
acaatagttctagagaatacaggtggacagtcaagtctggggaatcttcaaggtatccga
actttccgagtcttccgagttcttcggaccatctcaatcataccaggtttgaagacgatt
gtgaatgcgttgttgagggcgttccgcatgttgctggaggtgatgatgctcatctgtttc
tgtctgatggtgtttgccctcttttccctccaaatctacatggggtcactgcggcagaag
tgcgtcaccaacctgaactactcccttgcctcgccgcccgcctacacctacgaccagtac
ttcaacgaccacaccaaaaactctttcaactggtacatggaaggtgaatacctatgtggg
aacacttctggtgcccagtcgtgtccggacggctacacgtgttttggggacatcggagaa
aatccacgctgggggttcgttagcttcgaccactttggctgggccatgcttacctccttc
cagctcatgacccttgacttttgggaggacacctacaataaggtgctccagacatccggt
cccctgaacgtgatcttcttcatactcgtcatcttctttggctccttctaccttgtaaac
ctgatgttggctgtcgttgctatgtcgtatgagcaggagtccgaggccgccggcaagagt
aagggtcgtggtatgcgaatgtttagaccttatgaggatgagaaagagtctgatgcaaaa
gcgccagaggagaaagcaaaagagattaagaacaaggagcggaacaagaagaggaaaaaa
aagaaagaaaaagagaaaaaggaaaaagacgccctccgtgaccttgccaatgaacaatct
aatgataaaaataagcacgaccatcataaaaaacaccctgatgatgcagattacgatgac
ccctggatacatttgcgccatgagacaacaaatgcagtgagggccgctgttgagatggcg
tacccatccaatcatgccagcaagaagattccgacaagctctacggcccgccctctgggc
aacccaaaccatgtaagtcaaacagacaacaaggatagcaagcacatcaaacgtaaccct
atggtgaaaatggcgagcaaggacagcgggacgggaaactccgtggagagctcacgctct
aacgggagcaaggatgaatacaccttgatggaggatggttcctacccaggaagtactatt
gatataatcaagagagactctcgcttacccaccaagaaaccactgctcaaacaacagagc
actggcatggtgtcgtcctctggtgtgaccttaagtccttacagggttgaagagaataac
actgaccatttgacgtttgacggccccaatgactatgacaataccgatgacacgaataca
aacgccatggaggaagaatcaccaggccgaaaatatgtgcgggaaaaatatccgcatctc
accattgtggatgttggagatggtgacccgtacattgaacgtgaggaggaccaggtggtg
aacaggaactgtaactcctgctacaacgtttgcgggggccgcctgtttgttggctggctc
tggtaccagcagttctgcttcacgattatctccgagcccatgtttgacctgttcatcatt
gtctgtatcaccctcaacaccctcttcatgtccctggaacactacccacagactgacacc
ttctctgatgtactcagtgtcgcaaactatatattctcgacagtgtttatccttgaggca
gtcctcaagctgtctgctctgacaaagcattacttcaagaactcatggaatatctttgac
ctggtcattgtggtcattagtatctttgatttgaccctcaccaatgtggatggcctctct
gttatcaggatcttcaggctgttgagagtgtttaagctggcccagtcatggggtacgatg
cgactgctgctgtccatcatcatgaacacactgggggccctgggaaacctcaccctgatc
ctgctgattgtcatctatatctttgctgttgttggactccagcttttcaacgataaatac
acaccagacaagtttgatggggaagtcattaggtggcatttcaaggatatattccatgcg
tttatgatgatattccgcgtgctgtgtggggagtggatcgagcctctttgggactgcatg
cgtgccgctgatgaactctgcatggctgttttccttcctaccctcgtactgggatacttc
atcgtgctgaacctgtttcttgccctgctgctgaacgccttcgccagcgacacactccgt
gaggctaaagaatctagtgatgagaacgacaaactgaagctggcattttcacgcctctac
aatctcttctgctgctgcttgaagaagaagaatggtgcaaatgctgtctcccccgacact
gatgaggacggcaatgaggtcgtacagatcaaggacctcaaagtacaggaagaaaaagag
tctctaccggctattaaaaatggagtcgacaagaaaacatccaatggattatcaaataaa
gattccaagaatgtggataaggcatttgcaaccaaacgtgaccaatttgatgattttgca
aagaccatgcaggactcaaaaggtgataagactggcaaacctgctgaagttgaaactacc
aaggacacggtgaaaatactaaatgaacaggatggggaagagaagaaaaaggaggaagga
gtaacttactacacggttcctaaaaaaaccaaacaggtgaaaacagggaaagataagaac
aaggtggatactagtctgaatgtgccgaggaaggaccaagatgatatggagcttggagct
gaggcttcaactatcaagaaggatgccaagaaacatgatggggaggaggaggaagaggac
aaggttatcgaggttcatgcctgctggcctgtcttttgtgctaaacgatttgaagccaaa
aaccggtgtgtgtgttgctggctccacaatgattctacattctgggacaagtggtttaag
ttacgagtcttcatgaacatagttgtggaccacaagatctttgagggtatcatcctcctg
tctatagctgtcagcagcatcacactggcctttgaggatgtgaacctgtacaagaacatt
gtgatgcagcaggctctctactggcttaaccttctctttgctgtaatcttcggcgttgag
atgttcatgaagtggatcgcattcggattcaagaaatactttaccagtttttggtgtctc
cttgactttgttatagttgtgatatccgtggccagtattgtagctgaagcatatggagca
gccaatctgtcagcgttcagatcactccgtactctgagagcactacgacccctaagagcc
atttctcgctggcagggcatgcggattgtggtgaatgcgctgatgatggctataccagcc
atcatgaacgtgcttctcgtgtgcctgctgttctggctcatcttcagcatcatgggtgtc
cagttctttcggggcaagttctacaagtgtctcgacagcaacggtgataagctctctaat
gaagtggttgcaaacaaggctgagtgtctggccatggaagcttcacatggctataaatgg
gagaacagccctatcaactttgacaatgtctttagcggctttctagctcttttccaagtg
gctacatttgagggttggatggaagttatggaagatgcagtggacagtgcagatatcgac
gagcagcctagcttcgagaattcactctactcctacctattttttgtcgccttcatcatc
tttggcgctttctttacgctcaacctcttcattggtgtcatcattgacaacttcaacatg
ctgaagaagaagtatgatggtaattaccttgacatgttcctgacctctggccagcgacag
tactacaacaccatcaagaaactgggtaacaagaagccccagaaaaccatcaaacgacct
aagtaccgctgggtgtggttgaacaagatccagggtgtgttctacgacatagcgatcagc
agcaagtttgagctgtgtattgtcatcgtgatcttcctgaacatgatccagatggcagtt
gaccactatggccaaacccaggcagtcactgatgtcctctccatgcttaacatgctgttt
gtggtcatcttcaccctagaggcgatcgtcaagattattggcctacgttggcactatttc
acccagccctggaatatctttgactttgttgttgtgataatctcccttcttggcataata
ctgagtgacatcatgtcaaacgtgatcgtgagccccactctgctgcgagttgtgcgagtg
ttccgtatcggcagagtgctgcgacttatccgagccgcaaaaggaatccgcaagctcctg
tttgccttgatcatttcattgccggctctcctcaacatcggcatgctcctgttcctcatc
atgtacatctacgccatcatctgcctgtctcagttccagaacctcaaaattgaggatccc
ctcgacgaggatgttgtcaacttccgaacctttggtaatagttttctgctcatgttccgt
ctgtccactgctgcaggctggaacgatattcttggagctatgatgattgctccaccaaat
tgtaataacacccattaccaacaaggagacgagtggatagaaaattcaccaggaaattgt
ggcactagctggctagcagtgtttgcgctgactacatatattctcatcatattccttgtg
gttattaacatgtttatcgctgttattttagaaaactttaaccaagctcatgaacaggag
gaagttggcattactgaagatgactttgacatgttctatgctatctgggagagatatgat
ccccttgccactcagtttatcaaatatgaacagctatcaaactttgtggccgacttagag
ccacccttaggaataagtaaacctaatgaaatagctttagtatcttttgacctgcccata
acagagggtgataaactgcactgcctggatgtgctgatggcgctggtaaggtatgtgctg
ggaaatgtagaggagagtgatgaattcagacagttacatgaacagatggagcaaaagttt
caatctgcgtttcctactcgtgtcaataccactaaaaagactacaacaatgatgcgtaag
aaggaagatgtggctgctaaaacgttgcagcgagcttggaggagttggaaggctcaaaag
caaatgaaaaacattgccactttggctatgcaacaaaagaatcaaagtaaaagtgggact
tctattgagccccgcaacaaaaatagctcaatacgtaaccttggtacaaggcttacgaca
gctcttagtgctttctttagttcatcacgccccagtagtgctgtaagtcagctcagtatt
aagagctcaaatccctctattgcagaaaataacgcttccacatcaaaacagaagaaggct
caaagtgcgatgaatatgcccaatgtttcaacgttatatggccctggtagagacaatgat
atagagttgtga
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integrated database retrieval system
