Mya arenaria (softshell): 128227529
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Entry
128227529 CDS
T09995
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16498
protocadherin delta 1
Organism
maea
Mya arenaria (softshell)
Pathway
maea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128227529
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
maea01009
]
128227529
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128227529
Protein phosphatases and associated proteins [BR:
maea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128227529
Cell adhesion molecules [BR:
maea04515
]
Cadherins
Protocadherins
128227529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
Fibulin_C
Protocadherin
DUF3377
Motif
Other DBs
NCBI-GeneID:
128227529
NCBI-ProteinID:
XP_052794118
LinkDB
All DBs
Position
3:43979425..44029386
Genome browser
AA seq
1210 aa
AA seq
DB search
MEFKNIWAYFAFTFYLSITSAESISVNFEAEEEINGQQYLGNLITKVNDSVGNDLDGYGF
QIPNGVYSGYFTVNESGDFSAVQKIDRESICSAPKCVLQLNVYAISQADFLTIEVNVEIM
DTNDKIPEFSSNVFRLSIQEGNALGSTYELPSAVDLDTGINRIKNFVLEPNDGSFSLENH
TNLDASIGLNLRINLTLDRETIDLYQLLVKAIDGGSPALTGTLTVNINITDINDNRPVFD
PQKYNVTIDEDVAVNTELVIVTATDRDIGENARLSYSFTKMEPQSIQNVIAIEEATGKIF
INQRINSQTGPFTLFVEAADHGNPVKRSYQAEVIINVRDINNNAPQIVTITYINNRKIRE
DVAEGFLVAIFDVRDADTGENGDVTCTSENENFSIRKGEKNSMNIFQFSIHVHSKLDREV
KSSHDILINCSDNGEIPLHSNTSFTVAVEDVNDNAPFFAQREYSKDIFENVTSGAVLLKV
VATDRDDGPNARLNYSIVPTNAMSMFYIEADGIIRAVRPFDREEKDYYQFNVIAKDNGNP
SLNDTTVVEVRVLDINDNSPKFTGDSYAMAVLENSNVSTSIGQVTATDEDLGENGQVSFV
IPYEFPEDLFPFHVLDDGTVITKEVLDREVKSLYKFEILASDHGNPPKSTRVPVMVTVRD
VNDNKPYIEIPGDNENNSISIPHNTAKNTVIYTVVATDADENQEDELQYSIIAGNSKELF
QIDLVKGEIFLTREVKDDDPKQFTLEISVKDSQEFPLESTAELHISVFIAKGVMGPETSA
ASTGQNILIAIIISCVTVILSIIIITIICVLKRKDNQKALYNAKAYDEQKIISDPSRSSN
RSNSSRGSRDKMLFPPEPVYPGEMMFIENGFGKKQVSFSVDEEQDTGISIEASGQFDPVT
SFKSPSPVPVQSPDYQNYQKEVSPPRSEKSDDTKQREIHRMTSLRVHQALIQSHNNNNNN
NSKQWPQSSQEELSGQGRGYIGLARGKGHHLDDTHSESSGETTTSDSGRGGSEEDIRNIT
ISHDTDESRSPNTSTAHPFYSTDAQSPTFTSFHGNSVHKAGPVLSAFLKKKQNRRNSNSE
DKNNHNSYAMNDLSNPQRGGVPSVYSYRPNDGGESPRVNNTFNFDPHYGPSMTTFGHLKN
NLDANPLLHSSKQSNLNPANSFENDSVTGRSQDDDNTTTTSGSYTINDIQDDILASDMPQ
DMFYKPDTFV
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaagaatatttgggcgtactttgctttcactttttatttgtccattacttct
gcagagagtattagtgttaactttgaagcagaagaggaaatcaacggacaacaatacctt
ggcaatcttatcactaaagttaacgacagcgttggcaatgacttggatggatacggattt
caaattccaaatggcgtttacagtggatactttacggtcaatgaaagcggcgactttagt
gctgttcaaaaaatagaccgcgaaagtatttgctcagcacccaaatgtgtgctccaacta
aatgtgtatgcaatttcacaggcagattttctaacgatcgaagtaaatgttgaaataatg
gacaccaatgataagatcccagaattttccagcaatgtttttcgtctctcgatccaagaa
ggtaatgctcttggaagcacctatgagcttccgtctgctgttgatctcgacacaggaatc
aacaggataaaaaactttgttcttgagccaaatgatggaagcttttcactggaaaaccat
accaaccttgatgcctctattggacttaatcttagaattaacttaactcttgaccgtgaa
acaatagacttgtaccagcttttggtgaaagcaatagatggcggtagtcctgcactcact
ggtactctaactgtcaatattaacattacagacattaatgataatcgacctgtgtttgat
ccacaaaaatacaatgtcactatcgatgaagatgtagcagtgaatactgaactcgtcatt
gttactgcaacagacagagacataggcgaaaatgctaggttatcttacagtttcacaaaa
atggaacctcagtcgattcagaatgttattgccattgaagaagcaactggtaaaatattc
ataaaccaaaggattaactcccaaactggaccatttacgctgttcgttgaagctgctgat
catggtaatccagttaaaaggagttatcaagctgaagtcatcataaatgtcagagacatt
aacaataacgcccctcaaatagtgacaatcacttacataaataatagaaaaatcagagaa
gatgtagcagaagggtttcttgtggccatttttgatgttagggatgcagatacaggcgaa
aatggtgatgtcacatgcacttctgaaaacgagaatttttcaatcaggaaaggagagaaa
aactctatgaacatttttcagtttagtattcatgttcattcaaaacttgacagagaagtg
aaaagctcacatgacatactgataaattgttctgacaatggtgaaatccctctgcattca
aacacatcattcactgtagctgttgaagacgtcaacgataatgcacccttttttgctcag
cgtgaatactcaaaggatatctttgaaaatgtaacatccggagctgttctgttgaaagtg
gtagctactgatagagacgacggtccaaatgccaggcttaactacagtattgtccctacc
aatgcaatgagtatgttttacattgaagcagatggtatcattcgagcagtgcgaccattt
gatagagaagagaaggattattatcagtttaatgtgatcgctaaggacaatggcaatcca
agtctgaatgacactactgttgtagaagttagagttttggatatcaatgacaactctcca
aaatttaccggcgacagttacgcaatggctgttctcgaaaatagtaacgttagtacaagc
attggacaagtaactgcaacagatgaagatttaggtgaaaatggacaggtttcttttgtc
ataccttatgaattcccagaggatttatttccattccatgttctcgatgatggtacagtc
attacaaaggaagtcttggacagagaggtgaaaagtttgtacaagtttgagattcttgct
tctgaccacggtaatccgccaaagtctacaagagtgccggtgatggttacagtcagggat
gtcaatgataacaaaccatacattgaaataccaggagataatgaaaacaacagcatttcc
attccgcacaacactgcaaagaacactgtcatatacactgttgttgctactgacgctgat
gaaaaccaagaagatgagttgcaatacagtataatagcaggaaactctaaagagctgttt
caaatagatttagtcaagggtgaaatatttcttactcgtgaagtcaaagatgatgatcca
aaacagtttacactggaaatatcagtcaaagacagtcaggaatttccactggaatccaca
gccgaattacatatcagcgtcttcattgccaaaggggttatgggaccagaaacaagtgca
gcatctactggtcagaacatcctcattgccattattatttcctgtgtcactgtcatcctt
tccatcatcattatcaccataatttgtgtcttgaaacgcaaggacaaccaaaaagcactt
tacaatgccaaagcctacgatgaacaaaaaataatctctgatcccagcagaagtagcaat
cgctcgaattcatcccgaggatcaagagacaagatgctgttccctccagaaccggtttac
ccaggcgagatgatgtttatcgagaacggctttgggaaaaagcaggttagcttttccgtg
gatgaggaacaggacacaggaatctccattgaggcgagcggccagtttgaccctgtcact
tccttcaagtctccatctccggtaccagtccagtctcctgattaccagaactaccagaag
gaagtttctcctccgcgttcggagaagagtgacgacacgaaacagcgggaaatccacagg
atgacatcgctccgcgtacatcaggcactcatacagtctcacaacaacaacaataacaac
aacagcaaacagtggccacaatcatcacaagaagagctgtccggccaggggaggggatat
attggattggcgagggggaagggtcatcacctggacgacacacacagcgaatcttcaggg
gagacaaccactagcgactccgggcgaggtggcagcgaggaagacattcgtaatattacc
atctcgcatgacacagatgagtcacgaagccctaacacctcaaccgcccatccattctac
tccacagacgcccagtctccgacctttacatcgttccatggcaacagcgtacacaaagcc
ggtccagtcctctcagccttcctcaagaaaaaacagaaccgtaggaatagcaatagtgaa
gataaaaacaatcataattcctacgccatgaatgacttgtctaacccccaacggggaggg
gttcctagtgtgtattcatacagacctaacgatggcggtgaatcgccgagagtgaataat
acttttaatttcgatcctcattatggaccaagcatgactacttttggccatttaaagaat
aatctagatgccaatccattgttacattcatcaaaacagtccaacttgaatccagctaat
tcctttgagaatgatagcgttacgggacgatctcaagacgatgataatacaacaacaaca
tcaggtagctacaccatcaatgacattcaggatgacattcttgcttctgatatgccacag
gacatgttttacaagccagacacgtttgtctga
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integrated database retrieval system
