Mya arenaria (softshell): 128227615
Help
Entry
128227615 CDS
T09995
Name
(RefSeq) nucleolar protein 6-like isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
maea
Mya arenaria (softshell)
Pathway
maea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128227615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128227615
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128227615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
CTLH
Motif
Other DBs
NCBI-GeneID:
128227615
NCBI-ProteinID:
XP_052794277
LinkDB
All DBs
Position
3:complement(34667798..34689028)
Genome browser
AA seq
1181 aa
AA seq
DB search
MSSEEEMSDSGEDSDVSATVEDSDVDNSEAEMDSVGEEEEEEEQAEITTGKIEHDSRKRF
LEPSIDLPEGVPASKVSRNNKGDLYRPPTNEELNELKETENLFHSTLFRLQITELLAEVI
MKEKRRKRIEEAVEFLKTALLNLKPGKKYELTDRKLLTKLGVPVPMEMEPESDKGRFQFQ
PPSSVNVTGSFSAKICAKPAVSVDLVLSMPKECFDGMDHLNQRYLRKRAIYLAIVAKALR
QKPEVTDVKVSYHNGNSIKPKLVVDVKVGDHRPVTVHLYAVPETGTFKLSRFQLEKNNVR
ASWWEGQDGTGALQYASELPTPFYNTSILEDISMTTEVPGLEKISGSQGLREGIILLKVW
LSQRGLNKGYGSFSNHVMMMYVLYLLNQRKLNTLMSSYQVFRNTLLKFSESSWTDTGISL
CTGSQDSNSPLVVDFHRHFDVVFVDHSGYLNLAYTMDRSVFNRVKHEASQAIAVLEDRHT
DSFDKLFMKKVPFHFTFDHILHIDMSSDLDQMVRKLKVESRVADHGGSRLLACRSAILVL
MEKALGQRVLLIQACPRVPPEWDVTEPPPPEDEASRLTVGLTLDPEFAFSVLDKGPPADS
PEAVEFREFWGSVCELRRFQDGAICEAVLWMQKAPVCDRQLVCANIIKHVLNRHAGIPAN
CVQYIGGQLNSMLCLPVTMSNEPNTLPFGTGDEQSADLMKAYDDVCKKLRQLTDLPLTIN
SVQGVSPCFRFTEVFPPLPCTFRHTEERSLEHGMKRYVPTPDKPCPLYTHILKVVCTLEG
SGKWPDDLVAMKRLKAAFHLQLGDAIHTTFNLPTRPSVNYVDILKDNYVFRLVLAYTREI
SLLKSVYSSDGKLMKRDTEEALKLERETIALPRLTSILHGLQQQHPSFSTTVRFAKRWVC
GHMLGDHIHPMALELVVASLYLSPAPYTPPRSGLVGFLRFLDFLTTFDWKSSPLLVNLNN
EFTDADLSEIPTKFSKERSNLPLMFISTPLDPYSQHWTKEVPSAAVLTRLVLLAAKSLAV
LQRDLMQMEKQDLTVVFRPSLAIFNLVIHLNEKQLPRRLECLDVAMESDRVGYGKASDKE
RFPVTDFDPAQIFLNELKSTFGDVALFFHDQYGGKVIGVVWKPKTEQPKQFKVSHVNHSR
PESCEGDQFLLALNIEGVIEDIKLMGRGLVTAIEINHTKTS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaggaagagatgagtgacagcggtgaagacagtgatgtgagtgccactgtt
gaagatagtgatgtggataacagtgaggcagagatggactcagtaggagaggaggaggaa
gaagaggaacaggctgagataacaacaggaaaaatagagcatgactcaagaaaaaggttt
ttggagccttccattgacttgcctgagggtgtgccagctagtaaggtgtctcgaaacaac
aaaggagatctttacaggccgcccactaatgaggaattgaatgagctaaaagaaacagaa
aacctcttccactccacccttttcaggctacagattactgaattacttgctgaggtgatc
atgaaggaaaagaggcgaaaacgcattgaggaagctgtggaattcctgaaaactgcttta
ttgaatttgaagccaggaaagaagtatgagctaactgatagaaagctgctaacgaaactg
ggtgtgcctgttcccatggagatggagccagagagcgacaagggacgcttccagtttcag
cctcccagcagcgttaatgtgacgggtagtttctccgctaagatttgtgcaaaacctgct
gtcagtgttgacctggtgctcagtatgcctaaggagtgttttgatgggatggaccactta
aatcagcgctatcttcgaaaacgggctatatatttagctatagttgccaaggcgctgaga
caaaaacctgaggtcacagatgtcaaggtttcttatcacaatggaaacagtatcaaacca
aaacttgtggtagatgttaaagtcggggaccacagaccagtgactgttcacttgtacgct
gtgcccgagacagggacattcaagctctcaagatttcagctggagaaaaacaatgttcgg
gccagttggtgggaggggcaggatggaacaggtgcgttgcaatatgcatcagagttgccc
actccattctacaacaccagcattctagaagacatctccatgacaacagaagttcctggt
ctggaaaagatttccggatcacaggggttgagagaagggattattctgctgaaagtatgg
ctttcacagaggggattgaataagggctatgggtcattcagcaatcatgtgatgatgatg
tatgtactgtacctgctgaaccaacgcaaactaaacacattgatgagtagctaccaagtg
ttccgtaacacactccttaagttcagtgagagtagctggacagacactggtatcagcctg
tgtacagggagccaggacagtaactccccgctcgttgtcgactttcaccgccactttgac
gtcgtgtttgtggaccactcaggctatctcaacctcgcatacaccatggacagatctgtc
ttcaatagggtgaagcatgaagcatcgcaggcaattgctgtcctggaggacagacacaca
gatagttttgacaagctgttcatgaagaaagtgcccttccattttacctttgaccatatt
ttacacattgatatgagcagtgatcttgaccagatggtgcgcaagttgaaggtggagagc
cgagtggccgaccacgggggtagcaggctactagcatgcaggtctgccatcttggtgcta
atggaaaaggcgcttggtcagagggtcttgcttatacaggcctgtccacgtgtacctcca
gagtgggatgtcactgagccaccgcctcctgaggacgaggcttctcggctgacggtgggg
ctgaccctagaccctgagtttgccttcagtgtgctggataaaggacccccagctgattca
cctgaggctgtagagttccgtgagttctggggtagcgtgtgtgaactgcgtcggttccag
gatggggcaatatgtgaggccgtgttatggatgcagaaggccccggtgtgtgacaggcag
cttgtgtgtgccaacatcatcaaacatgtgctcaacagacatgctggtattcctgccaat
tgtgtccagtacatcggtggtcagttgaatagcatgctgtgcctgccagtcactatgtcc
aatgagcctaacactttgccctttggcaccggggatgaacagagtgctgacctgatgaag
gcgtatgacgatgtttgcaagaaactgcggcagcttacagacctgcctctcacaattaat
tcagtgcaaggagtgtctccatgtttcagatttacagaggtgtttccaccattgccatgc
acatttcggcacacggaggagcgttccctggagcatgggatgaagaggtatgtccctaca
ccagacaaaccgtgcccgctatacacacacatactgaaagtggtttgcacgctcgagggc
agtggtaagtggccggatgatctggtggctatgaaacgactcaaggcggccttccacctc
cagcttggggacgccatacacacaacattcaatctgccaacacgtccaagtgtcaactat
gttgatattcttaaggacaactacgtatttcgcctggtgttggcgtacactcgtgaaatc
tccctgctgaagagtgtgtactcgtcagacgggaagttaatgaagcgtgacacagaagag
gccttgaagctggaacgagaaactattgccctcccccgtctcaccagcatactgcacggg
ttgcagcagcagcacccttcattcagcactacagtacgctttgcgaagcgctgggtgtgt
gggcacatgctgggggaccacatccatccgatggccctggagctggttgttgcctccctt
tacctatctcctgccccctacacaccacccagatctggtttggtagggtttctgaggttc
ctggattttctcactacatttgactggaagtccagccctctgcttgtcaacctgaacaat
gaattcactgatgctgacctaagtgaaatcccaacaaaattctcgaaggagcgttctaac
ctgcccctgatgttcatctccaccccactagacccatacagtcaacactggacgaaggaa
gtccctagtgcagccgtacttaccaggctggttctcctagcggcaaagtcactcgctgtt
ctgcagcgggatctcatgcagatggaaaaacaagaccttacggttgtgttcagaccatcc
ctggccatctttaatctggttattcacctcaatgagaagcagttgccacgtcgactggaa
tgccttgatgttgccatggagagtgaccgggttgggtatgggaaagcctcggacaaggaa
cggttcccagtcactgactttgaccctgcacagatctttttgaatgaattaaagtcaaca
tttggtgatgtagccttgtttttccatgaccaatatggagggaaagttattggagttgtc
tggaaaccaaagactgaacagcctaaacagttcaaggtgtcccatgtaaaccacagtagg
ccggagagctgtgagggagaccagttcctactggccctgaatattgaaggtgtcatagaa
gatatcaaactgatggggagaggtctggtcacggccattgaaatcaatcacacaaagaca
agctga
DBGET
integrated database retrieval system
