Mya arenaria (softshell): 128227620
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Entry
128227620 CDS
T09995
Name
(RefSeq) toll-like receptor 4 isoform X1
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128227620
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128227620
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128227620
NCBI-ProteinID:
XP_052794327
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Position
1:complement(53250365..53263191)
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AA seq
935 aa
AA seq
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MCMELSMYKVVVEVFAVCAVLPSILVSAHVCTPSKLSDKAFDQCGQTGFAMKCNGRRLDN
IPSAYPIPSPPLSGPACVLDLSDNNISVVENKTFTEAKHINSTEISYLYLNKNHLNCLKS
EAFVGLSNLKYLNLSHNNLLWKDSFAPEVFAPLINLENINLKCNTFDTFDGLGQELMLIK
RLEGLFITPSNYTNRYSFGESFLNISLKYLYLSSTPECDCNLKEIDNNSFRNLSHIERLY
VKDCHIENVTEEAFKPLNETIKVLDISGNSNLTFKGMNKVLKGLINSPTLKELNVNRIHV
PYNIGIEITPDDLQSLNTLHNLEKLFMDLNKIEVFNVDTLYPKVMFPPSLTLLTLAGNRL
TFGKYVDYLFMARNIKTLDISRQFLGYDPFRFRKHNTLPHISSETPSAKVCDAKNKPVHV
RKESVVDINEGYIWDFALQKMLISNDEIKNMTRGDWAALFANFQNAFDVNCTCNVSVARQ
LICLPEHLSHIQWSRSYLYGAIPPVLICGAKHVKFLDLSYNLLSPWTGPVFGLHRLKKLD
LSENYCTNISKVFFFGFQNLEALNLTGNMLEETFHPNNADAGVMFGNQKKMKNLTLSAIN
VSNLHQDLLNSMVKLERLDLSYNHIHKWNLNLKSYCFHHLDITSNRLSSLPKDLMAYLDQ
MAESKCIKTKRINVTVYMSQNPLECSCEQLPFWQWIVTSTVNVHPRAIDSCMLNGKVKQI
TTDDEVHKLVKLLENDICIDRTWRTWAIAGGSLLIGVIVTITLGTATYKNRWKIRYVMYS
RGRRYRHEGFEHMFSHDAMISYSKGRASFIKNLLVPSLEQRHQLDFWIADRNSQAGVSVA
ENITHAICTSRKVVLLVDNEYLSDSWCDYDLNMALVESVETKRNMIIVVLMEQIQMNTLP
VPFLRLLKTEGSLEYPDQQQDIETFLTNLAEEIKS
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatggaattaagcatgtataaggtcgtcgtggaagtgtttgccgtgtgtgccgtg
ctcccaagtattttagtatctgctcatgtctgcacccccagtaaactatcggacaaagcc
ttcgatcagtgtggacaaacggggttcgcgatgaagtgtaacggacgtagactagataac
attcctagcgcatatcctatcccgtcaccacctttgtcagggccagcatgtgttcttgac
ctcagcgataacaacatatctgttgtggaaaataaaacgttcacagaagcaaaacacatt
aattcaactgagatttcatatttgtatctgaataaaaatcatcttaactgcctaaaaagt
gaagcattcgttggactatcgaatttaaagtatttaaacttgtcacataacaacttattg
tggaaggacagcttcgccccagaagtctttgcgccactgattaacttagaaaacataaat
ctaaagtgcaatacgttcgacacgtttgatgggctaggccaggaactgatgctgattaag
agattagagggtttatttattacaccaagcaattacacaaataggtattcattcggggaa
agctttctaaatattagcttaaagtatttgtacttgtcatctacacctgaatgtgattgc
aatttaaaggagatagacaacaattcatttcgaaatctttcccatattgagagactttat
gtgaaagattgtcacattgaaaacgtaactgaagaggcatttaaaccacttaacgaaacc
atcaaagtcttagatatatcaggaaattcaaatctgactttcaagggcatgaataaagtt
ctaaaaggtctcatcaattcaccaacactaaaggagttgaatgtgaatcgcatacatgtt
ccttacaacattggcatagaaattacaccagatgacttacaaagtctaaatacgttacac
aatctggaaaagctgtttatggatttgaataaaatcgaagtatttaacgttgacacatta
tatccaaaagttatgtttcctccatctttgactcttctcacgctagcaggcaacaggctc
acatttggaaaatacgttgactacttatttatggcgagaaatataaaaactttagatata
tccagacaatttcttggctatgatccatttaggtttagaaaacataatactctgcctcac
atatcaagtgaaacgccatcggcaaaggtttgtgatgcaaaaaacaagccagttcatgtc
agaaaggaatcagtggtggatatcaacgaaggatatatttgggattttgctttgcagaaa
atgctcatatccaacgatgaaatcaaaaacatgactcgaggtgattgggcagcattgttt
gccaacttccaaaatgctttcgatgtcaattgcacgtgtaatgtttctgtagccagacaa
ttgatatgcctgccagaacatctttcgcacattcaatggtctcggagctatttgtatggt
gcgatacctccagtgttaatatgtggagcgaaacatgtaaagtttttggatttatcatac
aacttgctgtcaccctggacaggacctgtgtttggtttgcatcgattaaagaagttggat
ttgtccgaaaactattgcacaaacatttcaaaagtcttcttttttggatttcagaatctg
gaagcgcttaacctgacaggaaatatgttagaagagacttttcaccccaacaatgcagat
gcaggtgttatgtttggaaatcagaagaaaatgaaaaatttgaccttgtcagccatcaac
gtaagcaatttgcatcaagatttgctcaattcgatggtcaagctggaacgcttagatctt
tcttacaatcacattcataaatggaacttgaacttgaaaagctattgttttcatcacctc
gatataacttccaacagactatcaagtttgccgaaagacctcatggcttatttggaccaa
atggcagagtctaaatgtattaaaaccaaacgtataaatgttaccgtttatatgtcgcaa
aaccctcttgagtgttcatgtgaacaacttcctttttggcaatggattgttacgtctact
gttaatgtccaccctagagctattgatagttgtatgcttaatggaaaggttaaacaaatt
acaactgatgatgaagttcacaagcttgtgaagctgcttgagaatgatatttgtatagac
cgaacatggagaacttgggcaattgctggtggaagtttgctgataggtgttattgttaca
attacattaggaacagctacgtataaaaatcgatggaagatcagatatgttatgtatagt
agaggacgcagatatcgacatgaagggtttgaacatatgttttcgcatgatgcgatgata
tcgtattccaaaggcagagcgagcttcataaaaaacttgttggttccttccctagaacag
cggcaccaacttgatttctggatagctgatagaaactcccaagcaggcgtgtctgtcgcg
gagaatatcacacatgcaatttgtacaagccggaaagtggtgttgcttgttgacaacgaa
tatctgtctgattcttggtgtgactatgatttgaacatggctctagtagaatcagtggaa
acgaaacgaaatatgataattgttgttttgatggaacaaattcagatgaatacactacct
gtcccatttttacggcttcttaagactgagggatcactggagtacccggaccaacaacaa
gatatagaaacgtttttgacaaatctagccgaagagataaaatcttga
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