Mya arenaria (softshell): 128227647
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Entry
128227647 CDS
T09995
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128227647
03400 DNA repair and recombination proteins [BR:
maea03400
]
128227647
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
128227647
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
128227647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
HEAT_2
INTS7_N
HEAT_GCN1_C
V-ATPase_H_N
SCD
Motif
Other DBs
NCBI-GeneID:
128227647
NCBI-ProteinID:
XP_052794339
LinkDB
All DBs
Position
3:complement(8973093..9001643)
Genome browser
AA seq
1582 aa
AA seq
DB search
MSQNVISGGKAVKVIYPPTCKEVTEDLGKDELVRRLKLIARAFQDMGQDENEQYSGLAIH
LATDFFLEHTNKDVRLLVACCLADVFRIFAPEAPYGDASRIKDIFMFLIKQLRGLEDPNS
PTFKRYFYLLENLAWVKSFNICIDLDDNQEIFCSLFKLMFSIINEKHTGKVKNFMIDMMC
PLLTEADVVSQELLDILLINIVEPHKSQNRQAFNLAKELLVRTGDSIEPYVQAFFNNALM
LGKTSESELSEHLYDLIYELNALCPSVLLAVLPQLEFKLKSNEETERKSVTKILSKMFSD
PESTLAEQNKPLWNCFLGRFNDISITVRTICVQSTLNFVMNHPELVKDVIEQVKIRQHDA
EETVRQEVVTALVKISKENFDATTPEMLDIIKERTRDKKFKIRQSALLGLGYLYKAVMAS
ETAPQAEVNKVVWVRDKVFHAYYQQNPDDRLMVERLFNMCLVPYTLPPNERMKRLYRLYG
KLDGPAVKAFHEMMKHRHIVRTHVKGILDGLDKMNQNPKEHVFLLPRLQHLSKTLPDQPK
ALEQLKKLNELLRDDKRLRNLMRYLVSPDCNCRKANENVKEILKRLGGGNTNSSQSQILL
YNNTKALLERVAPVMVDAQAMTCLVKHVEDAVKGQGTIADDIFEAGQKGVQLLLCFSTVF
PQYFKGEETFETLISFLKDEDEQVADVTLQIITNCGTDLETQSPDVFSKLLPILQHTAKI
GSPKQAKHALRCINKIVKNKEPVFSQIFEYVRNNLKPESANYITSIVALGHIANMCSEAF
SSSMKTIVSKDIVKDLLMEDRTHGEQVMDSWYSDHLVTEETNAKIQAMKLLMRWLLGLKS
NVNNCCTSTLRLLYTVIVHEGDLMEKMLINKPELARLRLQAGCVILKLAEEPVFADLIQQ
EQFQALALLINDSCYHVRMRFSEKLNKGLISMRLPLEFMSIFSLAANDPVRERRTTIKKF
LQLNIQRRRDFLKQNQVLGAKNTDDKGKLFQYLPDYVMPYTIHLLAHDPDLRSYEEVGAL
KNIKECLWFMMEPLVARSEEYNYHFFRRLIENIKQAKDLQNPDEDTNKKLYAVCDLALGL
LQKNLTNIVLKDSNVDPVLPGKLFSKPNKESLNSTVYLPKDFNFEKKKGISEPTDAAQPA
HNAPSTSGAGYYRGRQPKPTTLETIVVESPGPVVNPNPTCPREPKKKKVKREESPDESIE
GEAKTPKRTSRARGSKSAAAAKGADSIEDDDSEIGEPETPQGSDISSEPKSSPPPKKHTQ
GRGKGRAMALGKRNKKNVEPDESSQESVGKSDSQEEMEASPEMRDTNSQESEVTSPPKKR
LLKRTMAESGQTQKQSLQSNKKTGGKKGGKAGATAADTKESAEISGGKKGVVQKKGKGVV
NQNGAKGKGRGRKRTKEESESEQEEEEEEEEEVAAPSKKRANTSTAKGKGRGNKRVKEES
ESEEEEEEEEEDEEEEEEEDEEEETASSSKKRKFNLEKDAVPAPSLGKKKAANKKSNPSS
PASSVSSVASTPKKASPAKKATTKGPKPSASATLPARNVRRGRQLSNGTSASETDTSSPG
KAAALSRVIQKNTRRAPPKGKK
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatgtcatctcagggggtaaggctgtgaaggtcatttatcctcccacatgt
aaggaagtgacagaagatctgggaaaagatgagctggttcggagactcaagcttattgcc
agagcattccaagatatggggcaagatgagaatgagcagtattcaggtcttgctattcat
ctggccacagatttcttcctggaacacacaaacaaagatgttcgcctcctagtggcctgc
tgtctagccgatgttttcaggatttttgctccggaagctccttatggagatgcttcacgc
ataaaggacatcttcatgtttctaataaagcagttgcgtggacttgaagatcccaattct
cctacatttaagagatacttctacttgttagagaaccttgcctgggtgaagtccttcaac
atctgtattgacctggatgacaaccaagagattttctgcagtctcttcaaactgatgttt
tccatcatcaatgaaaagcacactggtaaagtgaagaacttcatgatagacatgatgtgt
cccctgctgacagaggcagatgtcgtgtcacaggagttgcttgatattctcctcatcaac
attgtcgagccacacaagagtcagaacagacaggctttcaatctggccaaggaactactt
gtgcggactggagattccatagagccttatgttcaagcattcttcaacaatgccctgatg
ctaggaaagacatcagagagtgagctatctgaacatctgtatgatctgatttacgagctg
aacgcactctgtccttccgtacttctggcggttctaccacagctggagttcaaactcaag
agtaatgaggagacagagcgaaagtctgtaacaaagatcctatccaagatgttctcagac
ccagagtcaaccctggctgagcaaaacaaaccactgtggaactgcttccttggcagattt
aatgacatcagtatcacagtgaggaccatttgtgtgcagtcaacactcaactttgtcatg
aatcatccagaacttgtcaaagatgtcattgagcaagtaaagattcgccagcatgatgca
gaagaaacagtccggcaggaggtggtgaccgccttggtgaagatctccaaggaaaacttt
gatgctaccacaccggagatgctggatatcatcaaagagaggaccagggataagaagttt
aagatccgccaatctgccttgctggggttgggctatctatacaaggcagttatggccagt
gagactgccccacaggccgaagtcaacaaggttgtctgggttagggacaaggtattccat
gcctactaccagcaaaacccagatgacaggttgatggtagagagactgttcaacatgtgc
ctggttccctacacactgcctcccaatgagaggatgaagcggctttataggctgtatgga
aaactggacggcccagctgtcaaggcattccatgaaatgatgaaacatcggcatatagtt
cggacccatgtgaagggtatactggacgggctagacaaaatgaatcagaaccccaaggag
catgtgttcctgttgcccaggctacaacacctctcaaagacattgccagaccagccaaaa
gcattagaacagttgaagaaactgaacgagttattgcgagatgataaacgtctccgaaat
ctcatgagatacctggtcagtccagactgcaattgtcggaaggccaacgaaaacgtgaaa
gaaatcctaaagcgtctaggcggtggtaataccaacagcagtcaaagtcagatactactg
tacaacaacacaaaggctctcctggaacgtgtggctccagtcatggttgatgctcaagcc
atgacctgtctggtcaaacatgttgaagatgctgttaagggtcaagggaccatcgctgat
gatatctttgaagctggacagaaaggggttcaacttttactatgtttttccactgtgttc
ccccagtatttcaaaggagaggagacatttgagaccctgatatccttcttgaaagatgag
gatgaacaagttgctgatgtcacattacagattatcacaaactgtggaacggatcttgaa
acccaaagtcctgatgttttttcaaaattgttaccaatactccagcacactgcaaagatc
ggaagtccaaagcaggcaaaacatgcattacggtgcattaacaaaattgtgaagaataaa
gaacctgttttctcacagatatttgagtatgttcgaaacaacctgaagcctgagtctgcc
aactacatcacatcaatagtggccctgggtcacatagcgaatatgtgttcagaggcgttc
tccagcagcatgaaaaccatcgtctccaaggacatagtcaaagatctgctaatggaggat
aggacacatggggaacaagtaatggacagctggtattccgatcatttggtcacagaggaa
acaaacgccaagatacaagctatgaagctgttaatgcgctggctattggggttgaagagc
aatgtgaataactgctgtacgtccactctgcggctactgtacaccgtcattgttcacgag
ggagatctcatggagaaaatgctaataaataagcctgagctagcccgactgcgcctccag
gctggttgtgtgatactgaagctggcggaggaacctgtgtttgctgatctcattcaacaa
gaacaattccaggcccttgcacttctcataaatgacagctgctaccatgtccgtatgcgg
ttctcagagaagctaaacaagggcctgatatccatgcgtctaccccttgagtttatgtca
atcttcagcctcgcagctaacgaccctgttcgagagaggcgcaccaccattaagaagttt
ctgcagctcaacattcagagacgcagggactttcttaaacaaaaccaagtgcttggagct
aagaacacagatgataaggggaagctattccagtacctgcctgattatgtaatgccctac
accatccacttgctagcccatgatccagacctccggtcttacgaagaagtgggcgctctc
aaaaacatcaaggagtgcctttggtttatgatggagccattggtcgcgagaagtgaggaa
tacaactaccatttcttccgtcgcctcatagagaacatcaaacaagctaaggatctacag
aaccctgatgaggatactaacaagaaactgtatgcagtgtgtgaccttgccctgggcctc
ctacagaaaaacctgaccaacatagttctcaaagacagtaacgtggaccctgttctgcca
ggaaaactattctctaaaccaaacaaggaatctcttaacagcacagtgtatttacctaag
gatttcaactttgaaaagaagaagggtatctcagagccaacggacgctgcacaacctgcc
cacaacgcacctagcacatcaggcgcaggctactaccgaggccgtcagcccaagcccacc
accttggagaccattgtggtcgagagtccagggcctgtggtgaacccaaaccccacatgt
ccccgggaacccaagaagaagaaagtcaaaagagaagaaagcccagatgagtcaattgaa
ggtgaagcaaaaactccaaagagaaccagcagggctcggggttcaaagtcagcagctgct
gccaaaggtgctgatagtattgaagatgatgacagtgaaatcggagagcctgaaacaccc
cagggctctgacataagctcagaaccaaagtcatcgccccctccgaaaaaacacacccaa
gggcgaggcaagggaagggcgatggctctggggaaaagaaataagaaaaacgttgagcca
gatgaatcatcacaggaaagtgtaggaaagagtgattctcaggaagaaatggaagcttct
ccggaaatgagagacactaattcacaggaatcggaagttacatcaccaccaaagaaaaga
ttgcttaagagaacaatggcggaaagtggtcaaactcaaaaacagtcgctacaaagtaat
aaaaagactggtggtaaaaagggtggaaaggctggtgcaacagctgcagacactaaagag
agtgcagagattagtggtggtaaaaagggagtggtacaaaagaagggcaagggtgttgtg
aatcaaaatggtgcaaagggaaaaggaaggggcaggaaaaggactaaagaggaaagtgaa
tcagaacaggaagaagaagaggaggaagaggaagaagttgcagcacccagcaagaagaga
gcgaatactagtactgcaaagggaaaaggacgaggcaacaagagggttaaggaagagagc
gagtctgaagaagaagaagaggaggaagaagaagatgaggaggaggaggaggaggaagat
gaggaggaggaaactgcgtcatcaagtaagaagagaaaattcaacctagagaaggatgct
gtccctgcacctagtctcggcaagaaaaaagctgccaacaaaaagtccaacccgtcctcg
cccgctagttctgtatcgagtgtcgcatccacaccaaagaaggcttccccagccaagaaa
gctacaacaaagggccccaaaccatcggctagtgcaactctgcctgccagaaatgtgaga
agaggcaggcagctgtctaacggcacatcagcgtcagaaaccgacaccagctcaccgggg
aaggctgctgcactatccagggtcatacagaagaataccagacgagctcctccaaaaggc
aaaaagtga
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integrated database retrieval system
